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Conway Institute - Research Publications 2006/07

Different World II - Art. Image by Dr Alfonso Blanco.

Different World II - Art. Image by Dr Alfonso Blanco.

Conway Institute - Research Publications 2005/06

Below is the list of research publications for the Conway Institute in the academic year 2006/07




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Book Chapters

Professor Mohamed Al-Rubeai
Ifandi, V. and Al-Rubeai M. (2007) 'Engineering of Cell Proliferation via myc Modulation' In: Al-Rubeai, M. and Fussenegger, M (eds). Cell Engineering vol. 5. Systems Biology. London: Springer. Available Online  
Khoo, S.H.G. and Al-Rubeai, M. (2007) 'Metabolomics' In: Al-Rubeai, M. and Fussenegger, M (eds). Cell Engineering vol. 5. Systems Biology. London: Springer. Available Online  
Carroll S., Naciri M. Al-Rubeai M. (2007) 'Monitoring of growth, physiology and productivity of animal cells by flow cytometry' In: R. Portner (eds). Animal Cell Biotechnology, Methods and Protocols. Methods in Biotechnology, vol 24. New Jersey, USA: Humana Press. Available Online  
Ishaque A. and Al-Rubeai M. (2007) 'Measurement of apoptosis in cell culture' In: Portner, R (eds). Animal Cell Biotechnology, Methods and Protocols. Methods in Biotechnology, vol 24. New Jersey, USA: Humana Press. Available Online  
Melero-Martin J. M. and Al-Rubeai M. (2007) 'In vitro expansion of chrondrocytes' In: Ashammakhi, N., Reis, R.L. and Chiallini, E (eds). Topics in Tissue Engineering, Vol 3. internet: E-book: Biomaterials and Tissue Engineering Group. Available Online  
Professor Geraldine Butler
Butler. G. (2007) 'The evolution of MAT - the ascomycetes' In: J. Heitman, J. Kronstad, J. Taylor, L. Casselton (eds). Sex in fungi: Molecular determination and evolutionary implications. Washington, DC: ASM Press.  
Butler G. and Sullivan D.J. (2007) 'Comparative genomics of Candida species' In: B. Hube and C. d'Enfert (eds). Candida: comparative and functional genomics. Norfolk, U.K: Caister Academic Press.  
Professor Patrick Lonergan
Lonergan, P. (2007) 'State-of-the-art embryo technologies in ruminants' In: Reproduction in Domestic Animals. London: Society for Reproduction and Fertility.  
Dr Patricia Maguire
Maguire PB, Belton O, O’Donoghue N & Coppinger JC. (2006) 'Platelet-endothelial interactions' In: Aird, W.C (eds). The Endothelium: A Comprehensive Reference. Cambridge, UK: Cambridge Univerity Press.  
Dr Gethin McBean
McBean G. (2007) 'Sulfur-containing amino acids' In: Lajtha A., Oja S., Schousboe A. and Saransaari P (eds). Handbook of Neurochemistry and Molecular Neurobiology. Vol.4, Amino acids and peptides in the nervous system. Berlin, Heidelberg: Springer-Verlag.  
Professor Michael James McGlinchey
McGlinchey, M.J., Ortin, Y., Seward, C.M. (2007) 'Chromium Compounds with CO or Isocyanides' In: D. M. P. Mingos & R. H. Crabtree (eds). Comprehensive Organometallic Chemistry III, Volume 5. Oxford, UK: Elsevier.  
Professor William Powderly
Jackson A, Powderly WG. (2007) 'Cryptococcal Infections' In: P. Portegies and J. Berger (eds). HIV/AIDS and the nervous system. New York: Elsevier.  
Professor Denis Shields
Shields DC, Johnston CR, Wallace IM, Edwards RJ (2007) 'Evolution of specificity and diversity' In: DA Liberles (eds). Ancestral Sequence Reconstruction. Oxford.  
Dr Dominic Walsh
Minogue, Aedin M., Fadeeva, Julia V., Tang, Jordan, Wasco, Wilma, Selkoe, Dennis J., and Walsh, Dominic M. (2006) 'Detection and characterization of secreted peptides derived from amyloid precursor-like protein 1 and 2' In: Eds. K Iqbal, B Winblad, J Avila, Medimond, Bologna (eds). Proceeding of the 10th Conference on Alzheimer's disease and related disorders. Bologna: Medimond.  
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Books Edited

Professor Mohamed Al-Rubeai
Al-Rubeai, Mohamed and Fussenegger, Martin (Ed.). (2007) Cell Engineering Vol. 5: Systems Biology. London: Springer. Available Online  
Professor Alexander Evans
Evans, A. and Mulligan, F (Ed.). (2006) Nutrition and Fertility in Dairy Cattle. Amsterdam: Elsevier.  
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Peer Reviewed Journals


Professor Mohamed Al-Rubeai
Sandhu, K.S., Naciri, M. and Al-Rubeai, M. (2007) 'Prediction of recombinant protein production in an insect cell-baculovirus system using a flow cytometric technique'. Journal of Immunological Methods, 325 (1-2):104-113.  
Khoo, S.H.G. and Al-Rubeai, M. (2007) 'Metabolomics as a complementary tool in cell culture'. Biotechnology and Applied Biochemistry, 47 :71-84.  
Astley, K., Naciri, M., Racher, A., and Al-Rubeai, M. (2007) 'The role of p21(cip1) in adaptation of CHO cells to suspension and protein-free culture'. Journal of Biotechnology, 130 (3):282-290.  
Majid, F. A. A., Butler, M., and Al-Rubeai, M. (2007) 'Glycosylation of an immunoglobulin produced from a murine hybridoma cell line: The effect of culture mode and the anti-apoptotic gene, bcl-2'. Biotechnology and Bioengineering, 97 (1):156-169.  
Turner, P., Petch, A., and Al-Rubeai, M. (2007) 'Encapsulation of viral vectors for gene therapy applications'. Biotechnology Progress, 23 (2):423-429.  
Kuystermans D, Krampe B, Swiderek H, Al-Rubeai M. (2007) 'Using cell engineering and omic tools for the improvement of cell culture processes'. Cytotechnology, 53 :3-22.  
Professor Alan Baird
Collins, C., Baird, A.W. and Campion, D. (2007) 'Effect of mast cell degranulation on chicken ileal ion transport in vitro'. Poultry Science, 86 (5):843-849.  
Fitzgerald D.C., Meade K.G., McEvoy A.N., Lillis L., Murphy E.P., Machugh D.E., Baird A.W. (2007) 'Tumour necrosis factor-alpha (TNF-alpha) increases nuclear factor kappaB'. Veterinary Immunology and Immunopathology, 116 (1):59-68.  
Deaton C.M., Deaton L., Jose-Cunilleras E., Vincent T.L., Baird A.W., Dacre K., Marlin (2007) 'Early onset airway obstruction in response to organic dust in the horse'. Journal of Applied Physiology, 102 (3):1071-1077.  
Professor John Bannigan
Dawrant MJ, Giles S, Bannigan J, Puri P. (2007) 'Adriamycin mouse model: a variable but reproducible model of tracheo-oesophageal malformations'. Paediatric Surgery, 23 (5):469-472.  
Dawrant MJ, Giles S, Bannigan J, Puri P. (2007) 'Abnormal separation of the respiratory primordium in the adriamycin mouse model of tracheoesophageal malformations'. Journal of Paediatric Surgery, 42 (2):375-380.  
Montedonico S, Nakazawa N, Shinkai T, Bannigan J, Puri P. (2007) 'Kidney d evelopment in the nitrofen-induced pulmonary hypoplasia and congenital diaphragmatic hernia in rats'. Journal of Paediatric Surgery, 42 (1):239-243.  
O' Donnell AM, Bannigan J, Puri P. (2006) 'Vagal neural crest contribution to the chick embryo cloaca'. Paediatric Surgery, 22 (12):983-986.  
Dr John Andrew Baugh
Martos, R; Baugh, J; Ledwidge, M; O'Loughlin, C; Conlon, C; Patle, A; Donnelly, SC; McDonald, K. (2007) 'Diastolic heart failure - Evidence of increased myocardial collagen turnover linked to diastolic dysfunction'. Circulation, 115 (7):888-895.  
Plant, BJ; Ghani, S; O'Mahony, MJ; Morgan, L; O'Connor, CM; Morgan, K; Baugh, JA; Donnelly, SC; (2007) 'Sarcoidosis and MIF gene polymorphism: a case-control study in an Irish population'. European Respiratory Journal, 29 (2):325-329.  
Govender P, Baugh JA, Pennington SR, Dunn MJ, Donnelly SC. (2007) 'Role of proteomics in the investigation of pulmonary fibrosis'. Expert Review of Proteomics, 4 (3):379-388.  
Dr Oliver Blacque
Ou G, Koga M, Blacque OE, Murayama T, Ohshima Y, Schafer JC, Li C, Yoder BK,Leroux MR, Scholey JM. (2007) 'Sensory Ciliogenesis in Caenorhabditis elegans: Assignment of IFT components into Distinct Modules Based on Transport and Phenotypic Profiles'. Molecular Biology of the Cell, 18 :1554-1569.  
Blacque OE, Li C, Inglis PN, Esmail M, Ou G, Mah AK, Baillie DL, Scholey JM, Leroux MR. (2006) 'The WD repeat-containing protein, IFTA-1, is required for effective retrograde intraflagellar transport'. Molecular Biology of the Cell, 17 :5053-5062.  
Efimenko E, Blacque OE, Ou G, Haycraft CJ, Yoder BK, Scholey JM, Leroux MR, Swoboda P. (2006) 'C. elegans DYF-2, anortholog of human WDR19, is a component of the IFT machinery in sensory cilia'. Molecular Biology of the Cell.  
Professor Maurice Boland
Murphy, A.M., MacHugh, D.E., Park, S.D.E., Scraggs, E., Haley, C.S., Lynn, D.J., Boland, M.P. and Doherty, M.L. (2007) 'Linkage mapping of the locus for inherited ovine arthrogryposis (IOA) to sheep Chromosome 5'. Mammalian Genome, 18 (1):43-52.  
Dr Billy Bourke
Croinin, T. O.,McCormack, A.,van Vliet, A. H.,Kusters, J. G.,Bourke, B. (2007) 'Random mutagenesis to identify novel Helicobacter mustelae virulence factors'. FEMS Immunol Med Microbiol, 50 (2):257-63.  
Byrne CM, Clyne M, Bourke B. (2007) 'Campylobacter jejuni adhere to and invade chicken intestinal epithelial cells in vitro'. Microbiology, 153 pt. 2 :561-569.  
Croinin TO, McCormack A, van Vliet AH, Kusters JG, Bourke B. (2007) 'Random mutagenesis to identify novel Helicobacter mustelae virulence factors'. Fems Immunology and Medical Microbiology .  
Bourke B, Broderick A, Bohane T. (2006) 'Peutz-Jeghers syndrome and management recommendations'. Clinical Gastroenterology and Hepatology, 12 .  
Rowland M, Broderick A, Bourke B. (2006) 'Behavioral and nutritional treatment to improve energy intake and growth in toddlers and preschool-aged children with cystic fibrosis'. Paediatrics, 118 (1):432-433.  
Dr Hugh Brady
Martin, R. J., Savage, D. A., Patterson, C. C., Brady, H. R., Maxwell, A. P. (2007) 'Common polymorphisms of the PAI1 gene do not play a major role in the development of diabetic nephropathy in Type 1 diabetes'. Diabet Med, 24 (3):259-65.  
Conway, B. R., Savage, D. A., Brady, H. R., Maxwell, A. P. (2007) 'Association between haptoglobin gene variants and diabetic nephropathy: haptoglobin polymorphism in nephropathy susceptibility'. Nephron Exp Nephrol, 105 (3):e75-9.  
McKnight, A. J., Savage, D. A., Patterson, C. C., Brady, H. R., Maxwell, A. P. (2006) 'Resequencing of the characterised CTGF gene to identify novel or known variants, and analysis of their association with diabetic nephropathy'. J Hum Genet, 51 (4):383-6.  
Professor David Brayden
Maher, S., Feighery, L., Brayden, D.J. and McClean, S. (2007) 'Melittin as a permeability enhancer II: In vitro investigations in human mucus-secreting intestinal monolayers and rat colonic mucosae'. Pharmaceutical Research, 24 (7):1346-1345.  
Leonard, T. W., O’Toole, E., Brennan, F., Brayden, D.J. (2006) 'Absorption enhancement: promoting the oral absorption of drugs in humans using Gastro-Intestinal Permeation Enhancement Technology (GIPET)'. Drug Delivery Technology, :2-8.  
Dr Derek P Brazil
Barry RE, Allan BB, Cummins EP, Kattla JJ, Giblin A, Scally N, Taylor CT, Brazil DP. (2007) 'Enhanced sensitivity of protein kinase B/Akt to insulin in hypoxia is independent of HIF1alpha and promotes cell viability'. European Journal of Cell Biology, 86 (7):393-403.  
Professor Geraldine Butler
Ding C. and Butler G. (2007) 'Development of a gene knockout system in Candida parapsilosis reveals a conserved role for BCR1 in biofilm formation'. Eukaryotic Cell, 6 :1310-1319.  
Rossignol T, Logue ME, Reynolds K, Grenon M, Lowndes NF, Butler G. (2007) 'Analysis of the transcriptional response of Candida parapsilosis following exposure to farnesol'. Antimicrob Agents Chemother, 51 (2304).  
Dignard D, El-Naggar AL, Logue ME, Butler G, Whiteway M. (2007) 'Identification and characterization of MFA1; the gene encoding Candida albicans a-factor pheromone'. Eukaryotic Cell, 6 :487-494.  
Fitzpatrick, DA; Logue, ME; Stajich, JE; Butler, G; (2006) 'A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis'. BMC Evolutionary Biology, 6 (NA).  
Mulhern, SM; Logue, ME; Butler, G; (2006) 'Candida albicans transcription factor Ace2 regulates metabolism and is required for filamentation in hypoxic conditions'. Eukaryotic Cell, 5 (12):2001-2013.  
Professor Dolores Cahill
Acher, P. L., Hodgson, D. J., Murphy, D. G., Cahill, D. J. (2007) 'High-intensity focused ultrasound for treating prostate cancer'. BJU Int, 99 (1):28-32.  
Taussig, MJ; Stoevesandt, O; Borrebaeck, CAK; Bradbury, AR; Cahill, D; Cambillau, C; de Daruvar, A; Dubel, S; Eichler, J; Frank, R; Gibson, TJ; Gloriam, D; Gold, L; Herberg, FW; Hermjakob, H; Hoheisel, JD; Joos, TO; Kallioniemi, O; Koegll, M; Konthur, Z; Korn, B; Kremmer, E; Krobitsch, S; Landegren, U; van der Maarel, S; McCafferty, J; Muyldermans, S; Nygren, PA; Palcy, S; Pluckthun, A; Polic, B; Przybylski, M; Saviranta, P; Sawyer, A; Sherman, DJ; Skerra, A; Templin, M; Ueffing, M; Uhlen, M; (2007) 'ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome'. Nature Methods, 4 (1):13-17.  
Professor Sean Callanan
Daly P, Drudy D, Chalmers WS, Baxendale W, Fanning S, Callanan JJ. (2006) 'Greyhound meningoencephalitis: PCR-based detection methods highlight an absence of the most likely primary inducing agents'. Veterinary Microbiology, 118 (3-4):189-200.  
Jahns H, Callanan JJ, McElroy MC, Sammin DJ, Bassett HF. (2006) 'Age-related and non-age-related changes in 100 surveyed horse brains'. Veterinary Pathology, 43(5): :740-750.  
Dr Deirdre Campion
Collins, C.B., McGrath, J., Baird, A.W. and Campion, D.P. (2007) 'Effect of mast cell degranulation on chicken ileal ion transport in vitro'. Poultry Science, 86 (5):843-9.  
Dr Eoin Casey
O’Grady, D., Barrett, M., Casey, E. and Glennon, B. (2007) 'The Effect of Mixing on the Metastable Zone Width and Nucleation Kinetics in the Anti-Solvent Crystallization of Benzoic Acid'. Chemical Engineering Research and Design, Transactions, 85 (A7):945-952. Available Online  
Dr Marguerite Clyne
Clyne M, Dolan B, Reeves EP. (2007) 'Bacterial factors that mediate colonization of the stomach and virulence of Helicobacter pylori'. Fems Microbiology Letters, 268 (2):135-143.  
Byrne CM, Clyne M, Bourke B. (2007) 'Campylobacter jejuni adhere to and invade chicken intestinal epithelial cells in vitro'. Microbiology, 153 (2):561-569.  
Dr Katrina May Comerford
Comerford KM, Leonard MO, Cummins EP, Fitzgerald KT, Beullens M, Bollen M, (2006) 'Regulation of protein phosphatase 1gamma activity in hypoxia through increased interaction with NIPP1: implications for cellular metabolism'. Journal of Cellular Physiology, 209 (1):211-218.  
Dr John Crean
Mitchell, DM., Gaffney, A., Crean, JK., Kinsella, BT. and Godson C (2007) 'The lipoxin A4 receptor is coupled to SHP-2 activation; implications for regulating growth factor receptor signalling'. Journal of Biological Chemistry .  
Furlong, F., Crean, J.K., Murphy, M., O’Leary R., and Martin, F. (2007) 'Dysregulated Intracellular Signaling Impairs CTGF Stimulated Responses in Human Mesangial Cells Exposed to High Extracellular Glucose'. American Journal of Physiology.  
Professor Mark Crowe
Buckham Sporer, K.R., Burton, J.L., Earley, B. and Crowe, M.A. (2007) 'Transportation stress in young bulls alters expression of neutrophil genes important for the regulation of apoptosis, tissue remodeling, margination, and anti-bacterial function'. Veterinary Immunology and Immunopathology, 118 :19-29.  
Gupta, S., Earley, B., Ting, S.T.L. and Crowe, M.A. (2007) 'Pituitary, adrenal, immune and performance responses of Holstein friesian bulls housed on slatted floors at various space allowances'. The Veterinary Journal, 173 (3):594-604.  
Gupta, S., Earley, B. and Crowe, M.A. (2007) 'Effect of 12 hour road transportation on physiological, immunological and haematological parameters in bulls housed at different space allowances'. The Veterinary Journal, 173 (3):605-616.  
Ryan, K.M., Casey, S.M., Canty, M.J., Crowe, M.A., Lonergan, P., Martin, F., and Evans, A.C.O. (2007) 'Signal transduction pathways Akt and Erk are early markers of differentiation in dominant and subordinate ovarian follicles in cattle'. Reproduction, 133 (3):617-626.  
Dr Peter Crowley
Sato, K., Crowley P.B. and Dennison, C. (2007) 'Transient protein interactions of Cytochrome f and the phytocyanin Umecyanin'. Chembiochem, 8 :732-735.  
Professor Peter Dervan
Meehan, M., Melvin, A., Gallagher, E., Smith, J., McGoldrick, A., Moss, C., Goossens, S., Harrison, M., Kay, E., Fitzpatrick, J., Dervan, P., Mc Cann, A. (2007) 'Alpha-T-catenin (CTNNA3) displays tumour specific monoallelic expression in urothelial carcinoma of the bladder'. Genes Chromosomes Cancer, 46 (6):587-93.  
Cantwell CP, Flavin R, Deane R, Sheehan K, Dervan P, O'Byrne J, Eustace S. (2007) 'Radiofrequency ablation of bone with cooled probes and impedance control energy delivery in a pig model: MR imaging features'. Journal of Vascular and Interventional Radiology, 18 (8):1011-1020.  
Meehan M, Melvin A, Gallagher E, Smith J, McGoldrick A, Moss C, Goossens S, Harrison M, Kay E, Fitzpatrick J, Dervan P, Mc Cann A. (2007) 'Alpha-T-catenin (CTNNA3) displays tumour specific monoallelic expression in urothelial carcinoma of the bladder'. Genes Chromosomes Cancer, 46 (6):587-593.  
Brennan DJ, Kelly C, Rexhepaj E, Dervan PA, Duffy MJ, Gallagher WM. (2007) 'Contribution of DNA and tissue microarray technology to the identification and validation of biomarkers and personalised medicine in breast cancer'. Cancer Genomics Proteomics, 4 (3):121-134.  
Hunt DA, Lane HM, Zygmont ME, Dervan PA, Hennigar RA. (2007) 'MRNA stability and overexpression of fatty acid synthase in human breast cancer cell lines'. Anticancer Research, 27 (1A):27-34.  
Lenane P, Powell FC, O'Keane C, Dervan P, O'Sullivan D, Bourke E, O'Loughlin S. (2007) 'Mycosis fungoides--a review of the management of 28 patients and of the recent literature'. International Journal of Dermatology, 46 (1):19-26.  
Hunt DA, Lane HM, Zygmont ME, Dervan PA, Hennigar RA. (2007) 'MRNA stability and overexpression of fatty acid synthase in human breast cancer cell lines'. AntiCancer Research, 27 (1A):27-34.  
Dr Seamas Donnelly
Bucala, R., Donnelly, S. C. (2007) 'Macrophage migration inhibitory factor: a probable link between inflammation and cancer'. Immunity, 26 (3):281-5.  
Govender, P., Baugh, J. A., Pennington, S. R., Dunn, M. J., Donnelly, S. C. (2007) 'Role of proteomics in the investigation of pulmonary fibrosis'. Expert Rev Proteomics, 4 (3):379-88.  
Foley, S. C., Hopkins, N. O., Fitzgerald, M. X., Donnelly, S. C., McLoughlin, P. (2007) 'Airway nitric oxide output is reduced in bronchiectasis'. Respir Med, 101 (7):1549-55.  
Martos, R; Baugh, J; Ledwidge, M; O'Loughlin, C; Conlon, C; Patle, A; Donnelly, SC; McDonald, K; (2007) 'Diastolic heart failure - Evidence of increased myocardial collagen turnover linked to diastolic dysfunction'. Circulation, 115 (7):888-895.  
Plant, BJ; Ghani, S; O'Mahony, MJ; Morgan, L; O'Connor, CM; Morgan, K; Baugh, JA; Donnelly, SC; (2007) 'Sarcoidosis and MIF gene polymorphism: a case-control study in an Irish population'. European Respiratory Journal, 29 (2):325-329.  
Professor Brendan Drumm
Oderda, G; Shcherbakov, P; Bontems, P; Urruzuno, P; Romano, C; Gottrand, F; Gomez, MJM; Ravelli, A; Gandullia, P; Roma, E; Cadranel, S; De Giacomo, C; Canani, RB; Rutigliano, V; Pehlivanoglu, E; Kalach, N; Roggero, P; Celinska-Cedro, D; Drumm, B; Casswall, T; Ashorn, M; Arvanitakis, SN; PERTH Grp; (2007) 'Results from the Pediatric European Register for Treatment of Helicobacter pylori (PERTH)'. Helicobacter, 12 (2):150-156.  
Professor Michael J. Dunn
Govender P, Baugh JA, Pennington SR, Dunn MJ, Donnelly SC. (2007) 'Role of proteomics in the investigation of pulmonary fibrosis'. Expert Rev Proteomics, 4 (3):379-388.  
Downes, MR; Byrne, JC; Pennington, SR; Dunn, MJ; Fitzpatrick, JM; Watson, RWG. (2007) 'Urinary markers for prostate cancer'. BJU International, 99 (2):263-268.  
Cieslak A, Vogler AP, Lafranchi-Tristem N, Dunn MJ, Westbrook JA. (2007) 'Investigation of hormone activity in butterfly imaginal wing discs by protein expression pattern changes'. Electrophoresis, 28 (4):535-544.  
Dunn MJ. (2007) 'Two-dimensional polyacrylamide gel electrophoresis for cardiovascular proteomics'. Methods Mol Biol, 357 :3-13.  
Rose ML, Dunn MJ. (2007) 'Expression of heat shock protein 27 in human atherosclerotic plaques and increased plasma level of heat shock protein 27 in patients with acute coronary syndrome'. Circulation, 115 (17):434-435.  
Donoghue PM, McManus CA, O'Donoghue NM, Pennington SR, Dunn MJ. (2006) 'CyDye immunoblotting for proteomics: co-detection of specific immunoreactive and total protein profiles'. Proteomics, 6 (24):6400-6404.  
Professor Paul Engel
Paradisi, F; Collins, S; Maguire, AR; Engel, PC. (2007) 'Phenylalanine dehydrogenase mutants: Efficient biocatalysts for synthesis of non-natural phenylalanine derivatives'. Journal of Biotechnology, 128 (2):408-411.  
Chen, S. & Engel, P.C. (2007) 'An engineered mutant, L307V, of phenylalanine dehydrogenase from Bacillus sphaericus: high activity and stability in organic-aqueous solvent mixtures and utility for synthesis of noin-natural L-amino acids'. Enzyme and Microbial Technology, 40 :1407-1411.  
Dr Raj Ettarh
McGarvey, M. A., Bass, G., Ettarh, R. R. (2007) 'Nimesulide alters cell recruitment into mitosis in murine intestinal crypts without influencing the cell production rate'. Dig Dis Sci, 52 (6):1471-8.  
Professor Alexander Evans
Lonergan, P., Woods, A., Fair, T., Carter, F., Rizos, D., Ward, F., Quinn, K. and Evans, A.C.O. (2007) 'Effect of embryo source and recipient progesterone environment on embryo development in cattle'. Reproduction, Nutrition and Development, 19 (7):861-868.  
Mossa, F., Duffy, P., Naitana, S., Lonergan, P. and Evans, A.C.O. (2007) 'Association between numbers of ovarian follicles in the first follicle wave and superovulatory response in ewes'. Animal Reproduction Science, 100 (3-4):391-396.  
Corcoran, D., Evans, A.C.O., Lonergan, P. and Fair, T. (2007) 'Temporal expression of transcripts related to embryo quality in bovine embryos cultured from the two-cell to blastocyst stage in vitro or in vivo'. Molecular Reproduction and Development, 74 (8):972-977.  
Hawken, P.A.R., Beard, A.P., Esmaili, T., Kadokawa, H., Evans, A.C.O., Blache, D. and Martin, G.B. (2007) 'The introduction of rams induces an increase in pulsatile LH secretion in cyclic ewes during the breeding season'. Theriogenelogy, 68 (1):56-66.  
Ireland, J.J., Ward, F., Jimenez-Krassel, F., Ireland, J.L.H., Smith, G.W., Lonergan, P. and Evans, A.C.O (2007) 'Follicle numbers are highly repeatable within animal but inversely correlated with FSH concentrations and the proportion of good quality embryos after superstimulation in cattle'. Human Reproduction, 22 (6):1687-1695.  
O’Meara, C.M., Hanrahan, J.P., Donovan, A., Duffy, P., Evans, A.C.O. and Lonergan, P. (2007) 'Resuspending ram spermatozoa in seminal plasma after cryopreservation does not improve pregnancy rates in cervically inseminated ewes'. Theriogenelogy, 67 (7):1262-1268.  
Ryan, K.M., Casey, S.M., Canty, M.J., Crowe, M.A., Martin, F. and Evans, A.C.O. (2007) 'Akt and Erk signal transduction pathways are early markers of differentiation in dominant and subordinate ovarian follicles in cattle'. Reproduction, 133 (3):617-626.  
Fair, S., Hanrahan, J.P., Donovan, A., Duffy, P., O’Meara, C.M., Lonergan, P. and Evans, A.C.O. (2007) 'Hormonal relationships during the periovulatory period among ewe breeds known to differ in fertility after cervical artificial insemination with frozen thawed semen'. Animal Reproduction Science, 97 (3-4):284-294.  
Dr Trudee Fair
Doyle, J., Ellis, S.A., Lonergan, P., Fair, T. (2007) 'Classical and non-classical major histocompatability complex class I gene expression in in vitro-derived bovine embryos'. Reproduction Fertility and Development, 19 (1):250-250.  
Carter, F., Fair, T., Park, S., Wade, M., Evans, A.C.O., Lonergan, P. (2007) 'Gene expression profiling of immature and in vitro-matured bovine oocytes using affymetrix genechip technology'. Reproduction Fertility and Development, 19 (1):248-248.  
Dr Ursula Fearon
Markham T, Mathews C, Rogers S, Mullan R, Bresnihan B, Fitzgerald O, Veale DJ, Fearon U. (2006) 'Downregulation of the inhibitor of apoptosis protein survivin in keratinocytes and endothelial cells in psoriasis skin following infliximab therapy'. British Journal of Dermatology, 155 (6):1191-1196.  
Fearon U, Mullan R, Markham T, Connolly M, Sullivan S, Poole AR, FitzGerald O, Bresnihan B, Veale DJ. (2006) 'Oncostatin M induces angiogenesis and cartilage degradation in rheumatoid arthritis synovial tissue and human cartilage cocultures'. Arthritis and Rheumatism, 54 (10):3152-3162.  
Professor Desmond Joseph Fitzgerald
Maree, A. O., Fitzgerald, D. J. (2007) 'Variable platelet response to aspirin and clopidogrel in atherothrombotic disease'. Circulation, 115 (16):2196-207.  
Fitzgerald, D. J., Schaffitzel, C., Berger, P., Wellinger, R., Bieniossek, C., Richmond, T. J., Berger, I. (2007) 'Multiprotein expression strategy for structural biology of eukaryotic complexes'. Structure, 15 (3):275-9.  
Fitzgerald, D. J., Radek, K. A., Chaar, M., Faunce, D. E., DiPietro, L. A., Kovacs, E. J. (2007) 'Effects of acute ethanol exposure on the early inflammatory response after excisional injury'. Alcohol Clin Exp Res, 31 (2):317-23.  
Coppinger, J. A., O'Connor R, I., Wynne, K., Flanagan, M., Sullivan, M., Maguire, P. B., Fitzgerald, D. J., Cagney, G. (2007) 'Moderation of the platelet releasate response by aspirin'. Blood.  
Maree, A. O., Cox, D., Fitzgerald, D. J. (2007) 'Drug insight: aspirin resistance-fact or fashion?'. Nat Clin Pract Cardiovasc Med, 4 (3).  
Pastan, I., Hassan, R., FitzGerald, D. J., Kreitman, R. J. (2007) 'Immunotoxin treatment of cancer'. Annu Rev Med, 58 :221-37.  
Coppinger, J., Fitzgerald, D. J., Maguire, P. B. (2007) 'Isolation of the platelet releasate'. Methods in Molecular Biology, 357 :307-11.  
Fitzgerald, D. J., Berger, P., Schaffitzel, C., Yamada, K., Richmond, T. J., Berger, I. (2006) 'Protein complex expression by using multigene baculoviral vectors'. Nat Methods, 3 (12):1021-32.  
Onda, M., Nagata, S., FitzGerald, D. J., Beers, R., Fisher, R. J., Vincent, J. J., Lee, B., Nakamura, M., Hwang, J., Kreitman, R. J., Hassan, R., Pastan, I. (2006) 'Characterization of the B cell epitopes associated with a truncated form of Pseudomonas exotoxin (PE38) used to make immunotoxins for the treatment of cancer patients'. Journal of Immunology, 177 (12):8822-34.  
Gottesman, S., McCullen, C. A., Guillier, M., Vanderpool, C. K., Majdalani, N., Benhammou, J., Thompson, K. M., Fitzgerald, P. C., Sowa, N. A., Fitzgerald, D. J. (2006) 'Small RNA Regulators and the Bacterial Response to Stress'. Cold Spring Harb Symp Quant Biol, 71 :1-11.  
Professor William Gallagher
Rafferty, M., Faller, W. J., Moss, C., McCormick, J., Easty, D.J., and Gallagher, W. M. (2007) 'Real-time quantitative reverse transcriptase-polymerase chain reaction analysis of melanoma progression-associated genes'. AntiCancer Research, 27 :1301-1308.  
Brennan, Donal J., Kelly, Catherine, Rexhepaj, Elton, Dervan, Peter A., Duffy, Michael J., Gallagher, William M. (2007) 'Contribution of DNA and tissue microarray technology to the identification and validation of biomarkers and personalised medicine in breast cancer'. Cancer Genomics Proteomics, 4 :121-134.  
Smith, FM; Gallagher, WM; Fox, E; Stephens, RB; Rexhepaj, E; Petricoin, EF; Liotta, L; Kennedy, MJ; Reynolds, JV; (2007) 'Combination of SELDI-TOF-MS and data mining provides early-stage response prediction for rectal tumors undergoing multimodal neoadjuvant therapy'. Annals of Surgery, 245 (2):259-266.  
Lau, TY; O'Connor, DP; Brennan, DJ; Duffy, MJ; Pennington, SR; Gallagher, WM; (2007) 'Breast cancer proteomics: clinical perspectives'. Expert Opinion on Biological Therapy, 7 (2):209-219.  
O'Brien, Sallyann L., Fagan, Ailís, Fox, Edward J P., Millikan, Robert C., Culhane, Aedín C., Brennan, Donal J., McCann, Amanda H., Hegarty, Shauna, Moyna, Siobhan, Duffy, Michael J., Higgins, Desmond G., Jirström, Karen,  Landberg, Göran, Gallagher, William M. (2007) 'CENP-F expression is associated with poor prognosis and chromosomal instability in patients with primary breast cancer'. International Journal of Cancer, 120 (7):1426-1435.  
Duffy, M. J., O’Donovan, N., Brennan, D. J., Gallagher, W. M., and Ryan, B. M (2007) 'Survivin: a promising tumor biomarker'. Cancer Letters, 249 (1):49-60.  
Hughes, L., O’ Brien, S., and Gallagher, W. M., and McDonnell, S. (2007) 'DNA microarray-based transcriptomic profiling of an isogenic cell culture model of breast tumour cell invasion'. Anticancer Research, 27 :1353-1360.  
Rafferty, M., Faller, W. J., Moss, C., McCormick, J., Easty, D. J., and Gallagher, W. M. (2007) 'Real-time quantitative reverse transcriptase-polymerase chain reaction analysis of melanoma progression-associated genes'. Anticancer Research, 27 :1301-1308.  
McGee, S. F., O'Connor, D. P., and Gallagher, W. M. (2006) 'Functional interrogation of breast cancer: from models to drugs'. Drug Discovery Today, 1 (6):569-584.  
Kavanagh, C.A., Gorelova, T.A., Selezneva, II., Rochev, Y.A., Dawson, K.A., Gallagher, W.M., Gorelov, A.V., Keenan, A.K. (2006) 'Poly(N-isopropylacrylamide) copolymer films as vehicles for the sustained delivery of proteins to vascular endothelial cells'. J Biomed Mater Res A, 72 (1):25-35.  
Professor Declan Gerard Gilheany
Bergin, E., O'Connor, C.T., Robinson, S.B., McGarrigle, E.M., O'Mahony, C.P. and Gilheany, D.G. (2007) 'Synthesis of P-Stereogenic Phosphorus Compounds. Asymmetric Oxidation of Phosphines under Appel Conditions'. Journal of the American Chemistry Society.  
King, G; Bergin, E; Muller-Bunz, H; Gilheany, DG. (2007) '(R,R)-Ethylenebis[(2-methylphenyl)-phenylphosphine oxide] ('o-Tolyl DiPAMPO')'. Acta Crystallogre, 63 :3278-409.  
Dr Brian Glennon
O'Grady, D., Barrett, M., Casey, E., Glennon, B. (2007) 'The effect of mixing on the metastable zone width and nucleation kinetics in the anti-solvent crystallization of benzoic acid'. Chemical Engineering Research and Design, Transactions, 85 (A7):945-952.  
Professor Catherine Godson
Mitchell, D. O’Meara, S. Gaffney, A. Crean, JKG Kinsella, BT and Godson C. (2007) 'The lipoxin A4 receptor is coupled to SHP-2 activation; implications for regulation of receptor tyrosine kinases'. Journal of Biological Chemistry, 282 (21):15606-15618.  
Scannell, M., Flanagan, MB., deStefani, A., Wynne, KJ., Cagney, G., Godson, C. and Maderna (2007) 'Annexin-1 and peptide derivatives are released by apoptotic cells and stimulate phagocytosis of apoptotic neutrophils by macrophages'. Journal of Immunology, 178 (7):4595-4605.  
Professor Andrew Green
Doherty, LS; Kiely, JL; Deegan, PC; Nolan, G; McCabe, S; Green, AJ; Ennis, S; McNicholas, WT. (2007) 'Late-onset central hypoventilation syndrome: a family genetic study'. European Respiratory Journal, 29 (2):312-316.  
Professor Patrick Guiry
Hargaden, GC; McManus, HA; Cozzi, PG; Guiry, PJ; (2007) 'The application of bis(oxazoline) ligands in the catalytic enantioselective methallylation of aldehydes'. Organic & Biomolecular Chemistry, 5 (5):763-766.  
Coyne, AG; Guiry, PJ. (2007) 'Rhodium-catalysed asymmetric hydrosilylation of ketones using HETPHOX ligands'. Tetrahedron Letters, < /i> 48 (5):747-750.  
Professor William Hall
Ishak, R.,Vallinoto, A. C., Azevedo, V. N., Vicente, A. C., Hall, W. W., Ishak, M. O. (2007) 'Molecular evidence for infection by HTLV-2 among individuals with negative serological screening tests for HTLV antibodies'. Epidemiol Infect, 135 (4):604-9.  
Waters A, Coughlan S, Hall WW. (2007) 'Characterisation of a novel recombination event in the norovirus polymerase gene'. Journal of Virology, 363 (1):1-4.  
Tsuji T, Sheehy N, Gautier VW, Hayakawa H, Sawa H, Hall WW. (2007) 'The nuclear import of the human T lymphotropic virus type I (HTLV-1) tax protein is carrier- and energy-independent'. Journal of Biological Chemistry, 282 (18):13875-13883.  
Hassan, J; Dooley, S; Hall, W. (2007) 'Immunological response to cytomegalovirus in congenitally infected neonates'. Clinical and Experimental Immunology, 147 (3):465-471.  

Dr Carmel Hensey
Montesanti, A., Deignan, K., and Hensey, C. (2007) 'Cloning and characterization of Xenopus laevis Smac Diablo'. Gene, 392 (1-2):187-195.  
Dr Caroline Herron
Cumiskey, D., Curran, B.P., Herron, C.E,. O'Connor J.J (2007) 'A role for inflammatory mediators in the IL-18 mediated attenuation of LTP in the rat dentate gyrus'. Neuropharmacology, 52 (8):1616-1623.  
Professor Desmond Gerard Higgins
Fagan A, Culhane AC, Higgins DG. (2007) 'A multivariate analysis approach to the integration of proteomic and gene expression data'. Proteomics, 7 (13):2162-2171.  
O'Sullivan NC, McGettigan PA, Sheridan GK, Pickering M, Conboy L, O'Connor JJ. (2007) 'Temporal change in gene expression in the rat dentate gyrus following passive avoidance learning'. Journal of Neurochemistry, 101 (4):1085-1098.  
O'Brien SL, Fagan A, Fox EJ, Millikan RC, Culhane AC, Brennan DJ, McCann AH. (2007) 'CENP-F expression is associated with poor prognosis and chromosomal instability in patients with primary breast cancer'. International Journal of Cancer, 120 (7):1434-1443.  
Jeffery, IB; Madden, SF; McGettigan, PA; Perriere, G; Culhane, AC; Higgins, DG. (2007) 'Integrating transcription factor binding site information with gene expression datasets'. Bioinformatics, 23 (3):298-305.  
Wallace IM, Higgins DG. (2007) 'Supervised multivariate analysis of sequence groups to identify specificity determining residues'. BMC Bioinformatics, 8.  
Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C. (2007) 'The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods'. Nucleic Acids Research.  
Dr James Jones
Sweeney, CM; Jones, JFX; Bund, SJ. (2007) 'Adrenoceptor and cholinoceptor modulation of rat pulmonary vein cardiac muscle contractility'. Vascular Pharmacology, 46 (3):166-170.  
Dr Breandán Kennedy
Kennedy, B.N.; Yolanda Alvarez; Brockerhoff, S.E.; Stearns, G.; Sapetto-Rebow, B., Taylor, M.R.; and Hurley, J.B. (2007) 'Identification Of A Zebrafish Cone-Specific Promoter And Genetic Rescue Of Achromatopsia In The nof Mutant'. Invest. Ophth. Vis. Sci, (48):522-529.  
Dr Patricia Mary Kieran
Jeffers, P; Kerins, S; Baker, CJ; Kieran, PM. (2007) 'Generation of reactive oxygen and antioxidant species by hydrodynamically stressed suspensions of Morinda citrifolia'. Biotechnology Progress, 23 (1):138-145.  
Professor Therese Kinsella
Hanson, Julien, Dogné, Jean-Michel, Jeremie, Ghiotto, Moray, Anne-Lise, Kinsella, B. Therese, & Pirotte, Bernard. (2007) 'Design, synthesis and SAR of a series of N-alkyl-N’-[2-(aryloxy)-5-nitrobenzenesulfonyl]- urea and –cyanoguanidines as selective antagonists of the TP a and TP b isoforms of the human thromboxane A2 receptor'. Journal of Medicinal Chemistry, 50 (16):3928-3936.  
Mitchell D, O'Meara SJ, Gaffney A, Crean JK, Kinsella BT, Godson C. (2007) 'The Lipoxin A4 Receptor Is Coupled to SHP-2 Activation: Implications for Regulation of Receptor Tyrosine Kinases'. Journal of Biological Chemistry, 282 (21):15606-15618.  
Reid, Helen M. & Kinsella, B. Therese (2007) 'Palmitoylation of the TPbeta isoform of the human thromboxane A(2) receptor. Modulation of G protein: Effector coupling and modes of receptor internalization'. Cell Signal, 19 (5):1056-1070.  
Coyle AT, Kinsella BT. (2006) 'Synthetic peroxisome proliferator-activated receptor gamma agonists rosiglitazone and troglitazone suppress transcription by promoter 3 of the human thromboxane A(2) receptor gene in human erythroleukemia cells'. Biochemical Pharmacology, 71 :1308-1323.  
Professor Brendan Loftus
Nene V, Wortman JR, Lawson D, Haas B, Kodira C, Tu ZJ, Loftus B et al (2007) 'Genome Sequence of Aedes aegypti, a Major Arbovirus Vector'. Science, 316 :1718-1723.  
Lobo NF, Campbell KS, Thaner D, Debruyn B, Koo H, Gelbart WM, Loftus BJ, Severson DW, Collins FH. (2007) 'Analysis of 14 BAC sequences from the Aedes aegypti genome: a benchmark for genome annotation and assembly'. Genome Biology, 8 (5).  
Professor Patrick Lonergan
Tesfaye, D., Nganvongpanit, K., Besenfelder, U., Lonergan, P., Schellander, K. (2007) 'Suppression of connexin 43 and E-cadherin transcripts in in vitro derived bovine embryos following culture in vitro or in vivo in the homologous bovine oviduct'. Molecular Reproduction and Development, 74 (8):978-988.  
Mossa F, Duffy P, Naitana S, Lonergan P, Evans ACO (2007) 'Association between numbers of ovarian follicles in the first follicle wave and superovulatory response in ewes'. Animal Reproduction Science, 100 (3-4):391-396.  
Lonergan, P., Woods, A., Fair, T., Carter, F., Rizos, D., Ward, F., Quinn, K., Evans, A.C.O. (2007) 'Effect of embryo source and recipient progesterone environment on embryo development in cattle'. Reproduction, Fertility and Development, 19 (7):861-868.  
Rizos, D., Lonergan, P., Rath, D., De la Fuente, J., Wade, M., Parrilla-Riera, I., Gutierrez-Adan, A. (2007) 'Differences in transcript abundance between male and female bovine blastocysts produced in vitro using sexed semen'. Reproduction Fertility and Development, 19 (1):255-255.  
Smith, N.A., Lonergan, P., Duffy, P., Crosby, T.F., Quinn, P., McAuliffe, F., Evans, A.C.O. (2007) 'Undernutrition during the periconceptional period in ewes affects the blood pressure and weight of their neonatal lambs'. Reproduction Fertility and Development, 19 (1):194-195.  
Carter, F; Fair, T; Park, S; Wade, M; Evans, ACO; Lonergan, P. (2007) 'Gene expression profiling of immature and in vitro-matured bovine oocytes using affymetrix genechip technology'. Reproduction Fertility and Development, 19 (1):248-248.  
Doyle, J; Ellis, SA; Lonergan, P; Fair, T. (2007) 'Classical and non-classical major histocompatability complex class I gene expression in in vitro-derived bovine embryos'. Reproduction Fertility and Development, 19 (1):250-250.  
Ireland, J.J., Ward, F., Jimenez-Krassel, F., Ireland, J.L.H., Smith, G.W., Lonergan, P., E.vans, A.C.O. (2007) 'Follicle numbers are highly repeatable within animal but inversely correlated with FSH concentrations and the proportion of good quality embryos after superstimulation in cattle'. Human Reproduction, 22 (6):1687-1695.  
Rizos, D., Pintado, B., de la Fuente, J., Lonergan, P., Gutierrez-Adan, A. (2007) 'Development and pattern of mRNA relative abundance of bovine embryos cultured in the isolated mouse oviduct in organ culture'. Molecular Reproduction and Development, 74 (6):716-723.  
O’Meara, C., Hanrahan, J.P., Donovan, A., Duffy, P., Evans, A.C.O., Lonergan, P. (2007) 'Resuspending ram spermatozoa in seminal plasma after cryopreservation does not improve pregnancy rate in cervically inseminated ewes'. Theriogenelogy, 67 (7):1262-1268.  
Sweeney, T., Fox, J., Robertson, L., Kelly, G., Duffy, P., Lonergan, P., O'Doherty, J., Roche, J.F., Evans, N.P. (2007) 'Postnatal exposure to octylphenol decreases semen quality in the adult ram'. Theriogenelogy, 67 (5):1068-1075.  
Fair, S., Hanrahan, J.P., Donovan, A., Duffy, P., O' Meara, C.M., Lonergan, P., Evans, A.C.O. (2007) 'Hormonal relationships during the periovulatory period among ewe breeds known to differ in fertility after cervical artificial insemination with frozen thawed semen'. Animal Reproduction Science, 97 (3-4):284-294.  
Fair, S; Hanrahan, JP; Donovan, A; Duffy, P; O' Meara, CM; Lonergan, P; Evans, ACO; (2007) 'Hormonal relationships during the periovulatory period among ewe breeds known to differ in fertility after cervical artificial insemination with frozen thawed semen'. Animal Reproduction Science, 97 (3-4):284-294.  
Patel, O.V., Bettegowda, A., Ireland, J.J., Coussens, P.M., Lonergan, P., Smith, G.W. (2007) 'Functional genomics studies of oocyte competence: evidence that reduced transcript abundance for follistatin is associated with poor developmental competence of bovine oocytes'. Reproduction, 133 (1):95-106.  
Professor Donal MacElroy
Kowalczyk, P; Solarz, L; Do, DD; Samborski, A; MacElroy, JMD. (2006) 'Nanoscale tubular vessels for storage of methane at ambient temperatures'. Langmuir, 22 (21):9035-9040.  
Dr David MacHugh
Edwards, C.J., Baird, J.F., MacHugh, D.E. (2007) 'Taurine and zebu admixture in Near Eastern cattle: a comparison of mitochondrial, autosomal and Y-chromosomal data'. Animal Genetics, 38 (5):520-524. Available Online  
Fitzgerald, D.C., Meade, K.G., McEvoy, A.N., Lillis, L., Murphy, E.P., Machugh, D.E., Baird, A.W. (2007) 'Tumour necrosis factor-alpha (TNF-alpha) increases nuclear factor kappaB (NFkappaB) activity in and interleukin-8 (IL-8) release from bovine mammary epithelial cells'. Vet Immunol Immunopathol, 116 (1-2):59-68.  
Murphy, A.M., MacHugh, D.E., Park, S.D.E., Scraggs, E., Haley, C.S., Lynn, D.J., Boland, M.P., Doherty, M.L. (2007) 'Linkage mapping of the locus for inherited ovine arthrogryposis (IOA) to sheep Chromosome 5'. Mammalian Genome, 18 (1):43-52.  
Dr Paola Maderna
Scannell M, Flanagan MB, deStefani A, Wynne KJ, Cagney G, Godson C, Maderna P. (2007) 'Annexin-1 and peptide derivatives are released by apoptotic cells and stimulate phagocytosis of apoptotic neutrophils by macrophages'. Journal of Immunology, 178 (7):4595-4605.  
Scannell M, Maderna P. (2006) 'Lipoxins and annexin-1: resolution of inflammation and regulation of phagocytosis of apoptotic cells'. Scientific World Journal, 6 :1555-1573.  
Professor Kevin Malone
Malone, K. M., Ellis, S. P., Currier, D., John Mann, J. (2007) 'Platelet 5-HT2A receptor subresponsivity and lethality of attempted suicide in depressed in-patients'. Int J Neuropsychopharmacol, 10 (3):335-43.  
Kingston, T., Dooley, B., Bates, A., Lawlor, E., Malone, K. (2007) 'Mindfulness-based cognitive therapy for residual depressive symptoms'. Psychol Psychother, 80 (Pt 2):193-203.  
Aman, M. G., Benson, B. A., Farmer, C. A., Hall, K. L., Malone, K. M. (2007) 'Project MED: effects of a Medication EDucation booklet series for individuals with intellectual disabilities'. Intellect Dev Disabil, 45 (1):33-45.  
Professor Jonathan Malthouse
Alana I, Malthouse JP, O'Harte FP, Hewage CM. (2007) ''Bioactive conformation of glucose-dependent insulinotropic polypeptide by NMR and CD spectroscopy'. Proteins, 68 (1):92-99.  
Malthouse (2007) '13C-and 1H- NMR studies of oxyanion and tetrahedral intermediate stabilization by the serine proteinases: optimising inhibitor warhead specificity and potency by studying the inhibition of the serine proteinases by peptide derived chloromethylketone and glyoxal inhibitors'. Biochemical Society Transactions, 35 :566-570.  
Spink E., Cosgrove S., Rogers L., Hewage C., Malthouse J.P.G, (2007) '13C- and1H-NMR studies of ionisations and hydrogen bonding in chymotrypsin-glyoxal inhibitor complexes'. Journal of Biological Chemistry, 282 :7852-7861.  
Brennan L, Hewage C, Malthouse JP, McClenaghan NH, Flatt PR, Newsholme P. (2006) 'Investigation of the effects of sulfonylurea exposure on pancreatic beta cell metabolism'. Febs Journal, 273 (22):5160-5168.  
Dr Bryan Markey
Markey B., Wan C., Hanger J., Phillips C. and Timms P. (2007) 'Use of quantitative real-time PCR to monitor the shedding of chlamydiae in the koala (Phascolarctos cinereus)'. Veterinary Microbiology, 120 :334-342.  
Sheehan, M., Cassidy, J.P., Brady, J., Ball, H., Doherty, M.L., Quinn, P.J., Nicholas, R.A.J. and Markey, B.K. (2007) 'An aetio-pathological study of chronic bronchopneumonia in lambs in Ireland'. The Veterinary Journal, 173 :630-637.  
Breslin P., McElroy M., Bassett H. and Markey B. (2006) 'Vacuolar lesion profile of BSE in the Republic of Ireland'. Veterinary Record, 159 :889-890.  
Professor Fionnuala Mc Auliffe
Foley, P., McAuliffe, F., Mullarkey, M., Reardon, W. (2007) 'Antenatal diagnosis of deletion chromosome 11(q23-qter) (Jacobsen syndrome)'. Clin Dysmorphol, 16 (3):177-9.  
Wald, R. M.,Tham, E. B., McCrindle, B. W., Goff, D. A., McAuliffe, F. M., Golding, F., Jaeggi, E. T., Hornberger, L. K., Tworetzky, W., Nield, L. E. (2007) 'Outcome after prenatal diagnosis of tricuspid atresia: a multicenter experience'. Am Heart J, 153 (5):772-8.  
Dr Gethin McBean
Montgomery, T., Boun, C., Eibauer, S., Guiry, P.J., Keenan, A.K., McBean, G.J. (2007) 'Comparative potencies of 3,4-methylenedioxymethamphetamine (MDMA) analogues as inhibitors of [3H]noradrenaline and [3H]5-HT transport in mammalian cell lines'. British Journal of Pharmacology, epub ahead of print.  
Professor Michael James McGlinchey
Banide, EV; Molloy, BC; Ortin, Y; Muller-Bunz, H; McGlinchey, MJ; (2007) 'From allenes to tetracenes: A synthetic and structural study of silyl- and halo-allenes and their dimers'. Eur Journal Org Chem, :2611-2622.  
Nikitin, K; Muller-Bunz, H; Ortin, Y; McGlinchey, MJ; (2007) 'Joining the rings: the preparation of 2- and 3-indenyl-triptycenes, and curious related processes'. Org Biomol Chem, 5 :1952-1960.  
Banide, EV; Muller-Bunz, H; Manning, AR; Evans, P; McGlinchey, MJ; (2007) 'X-ray crystal structure of an alkene-pentacarbonyldicobalt-alkyne complex: Isolation of a stable Magnus-type Pauson-Khand reaction intermediate'. Angew Chem Int Edit, 46 :2907-2910.  
Professor Joseph McKenna
Smith, TP; Kavanagh, L; Healy, ML; McKenna, TJ; (2007) 'Technology Insight: measuring prolactin in clinical samples'. Nature Clinical Practice Endocrinology & Metabolism, 3 (3):279-289.  
Professor Paul McLoughlin
Foley SC, Hopkins NO, Fitzgerald MX, Donnelly SC, McLoughlin P. (2007) 'Airway nitric oxide output is reduced in bronchiectasis'. Respiratory Medicine, 101 (7):1549-1555.  
Dr Tara McMorrow
Nee L, Tuite N, Ryan MP, McMorrow T. (2007) 'TNF-Alpha and IL-1Beta-Mediated Regulation of MMP-9 and TIMP-1 in Human Glomerular Mesangial Cells'. Experimental Nephrology, 102 (2):73-86.  
Feldman, G., Kiely, B., Martin, N., Ryan, G., McMorrow, T. and Ryan, M.P. (2007) 'Role for TGF-Beta in cyclosporine-induced modulation of renal epithelial barrier function'. Journal of the American Society of Nephrology, 18 (6):1662-1671.  
Dr James McRedmond
McRedmond J (2007) ''Finding drug targets through analysis of the platelet transcriptome''. Current Pharmaceutical Design, 13 (26):2662-2667.  
Professor Wim Meijer
Smith, C.J., Danilowicz, B.S. and Meijer, W.G. (2007) 'Characterisation of the bacterial community associated with the surface and mucus layer of whiting'. Fems Microbial Ecology, 62 :90-97. Available Online  
Gawler, A.H., Beecher, J.E., Brandão, J., Carroll, N., Falcão, L., Gourmelon, M., Masterson, B., Nunes, B., Porter, J., Rincé, A., Rodrigues, R., Thorp, M., Walters, J.M., and W.G. Meijer (2007) 'Validation of host specific Bacteroidetes 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim countries of the European Union'. Water Research, 41 :3780-3784.  
Byrne, G.A., Russell, D.A., Chen, X and Meijer, W.G. (2007) 'Transcriptional regulation of the virR operon of the intracellular pathogen Rhodococcus equi'. Journal of Bacteriology, 189 :5082-5089. Available Online  
Muscatello, G, Leadon, D.P., Ocampo-Sosa, A., Lewis, D.A., Fogarty, U., Buckley, T., Klay, M., Gilkerson, J.R., Meijer, W.G. and Vazquez-Boland, J.A. (2007) 'Rhodococcus equi infection in foals: the science of 'Rattles''. Equine Veterinary Journal, 39 :470-478.  
Dr Grace Morgan
McKee, V., Nelson, J. and Morgan, G.G. (2006) 'Tris[2-(2-nitrobenzylideneamino)ethyl]amine'. Acta Cryst. E, 62 (9):3747-3749.  
Morgan, G.G., Murnaghan, K.D., Muller-Bunz, H., McKee, V. and Harding, C.J. (2006) 'Manganese(III) Spin Crossover Triggered by Geometric Tuning'. Angew. Chem. Int. Ed, 45 :7192-7195.  
Professor Grace V T Mulcahy
Tierney JB, Matthews E, Carrington SD, Mulcahy G. (2007) 'Interaction of Eimeria tenella with intestinal mucin in vitro'. Journal of Parasitology.  
Flynn RJ, Mannion C, Golden O, Hacariz O, Mulcahy G. (2007) 'Experimental Fasciola hepatica infection alters responses to tests used for diagnosis of bovine tuberculosis'. Infection and Immunity, 75 :1373-1381.  
Good B, Hanrahan JP, Crowley BA, Mulcahy G. (2006) 'Texel sheep are more resistant to natural nematode challenge than Suffolk sheep based on faecal egg count and nematode burden'. Veterinary Parasitology, 136 :317-327.  
Sekiya, M., G. Mulcahy, J. A. Irwin, C. M. Stack, S. M. Donnelly, W. Xu, P. Collins and J. P. Dalton (2006) 'Biochemical characterisation of the recombinant peroxiredoxin (FhePrx) of the liver fluke, Fasciola hepatica'. Febs Lett, :5016-5022.  
Dr Cormac Declan Murphy
C.D. Murphy (2007) 'Fluorophenol oxidation by fungal chloroperoxidase'. Biotechnology Letters, 29 :45-49.  
C.D. Murphy (2007) 'The Application of 19F NMR to Investigate Microbial Biotransformations of Organofluorine Compounds'. Omics: A Journal of Integrated Biology, 11 (3):314-324.  
Hutchinson, RI; Grant, RJ; Murphy, CD; (2006) 'Biosynthetic origin of [R-(Z)]-4-amino-3-chloro-2-pentenedioic acid in Streptomyces viridogenes'. Bioscience Biotechnology and Biochemistry, 70 (12):3046-3049.  
Dr Evelyn Murphy
Mix, K., Mukundan, G., Al-Mussawir, H., Abramson, S.B., Brinckerhoff, C.E. and Murphy, E. (2007) 'Transcriptional regulation of matrix metalloproteinase gene expression by the orphan nuclear receptor NURR1 in cartilage'. Journal of Biological Chemistry, 282 (13):9492-9504.  
Fitzgerald, D.C., Meade, K.G., McEvoy, A.N., Lillis, L., Murphy, E.P., Machugh, D.E., Baird, A.W. (2007) 'Tumour necrosis factor-alpha (TNF-alpha) increases nuclear factor kappaB (NFkappaB) activity in and interleukin-8 (IL-8) release from bovine mammary epithelial cells'. Veterinary Immunology and Immunopathology, 116 (1/2):59-68.  
Ralph, J., Zocco, D., Bresnihan, B., FitzGerald, O., McEvoy, A. and Murphy, E. (2007) 'A role for Type 1 alpha CRH receptors in mediating local changes in chronically inflamed tissue'. American Journal of Pathology, 170 (30):1121-1133.  
Dr Keith J Murphy
Conboy L, Monopoli MP, O'Sullivan NC, Murphy KJ, Regan CM (2007) 'Notch signalling is transiently increased during long term memory consolidation in adult wistar rats'. Journal of Neurochemistry, 88 :342-351.  
O'Sullivan NC, McGettigan PA, Sheridan GK, Pickering M, Conboy L, O'Connor JJ, Moynagh PN, Higgins DG, Regan CM, Murphy KJ. (2007) 'Temporal change in gene expression in the rat dentate gyrus following passive avoidance learning'. Journal of Neurochemistry, 101 :1085-1098.  
Sheridan GK, Pickering M, Twomey C. Moynagh PN, O'Connor JJ, Murphy KJ. (2007) 'NF?B activity in distinct neural subtypes of the rat hippocampus: Influence of time and GABA antagonism in acute slice preparations'. Learning Memory, 14 :525-532.  
Professor Paul Murphy
Danieli, Elisa, Lalot, Jérôme, Murphy, Paul V. (2007) 'Selective protecting group manipulations on the 1-deoxynojirimycin scaffold'. Tetrahedron, 63 :6827-6834.  
Zaric, Violeta, Doyle, Dearbhla, Murphy, Paul V., O'Boyle, Kathy M. (2007) 'Inhibition of endothelial cell proliferation by N-?-D-mannopyranosyl-thiophene-2-carboxamides'. AntiCancer Research, 27 :1331-1336.  
Loukou, Christina, Tosin, Manuela, Müller-Bunz, Helge, Murphy, Paul V. (2007) 'Synthesis of sugar-lactams from azides of glucuronic acid'. Carbohydrate Research, 342 :1953-1959. Available Online  
O'Brien, C; Polakova, M; Pitt, N; Tosin, M; Murphy, PV; (2007) 'Glycosidation-anomerisation reactions of 6,1-anhydroglucopyranuronic acid and anomerisation of beta-D-glucopyranosiduronic acids promoted by SnCl4'. Chemistry-A European Journal, 13 (3):902-909.  
Cronin, L; Tosin, M; Muller-Bunz, H; Murphy, PV. (2007) 'The synthesis of cyclicimidates from amides of glucuronic acid and investigation of glycosidation reactions'. Carbohydrate Research, 342 (1):111-118.  
Murphy, Paul V. and Dunne, Julie L. (2006) 'Syntheses of peptidomimetics based on pyranose and polyhydroxylated piperidine scaffolds'. Curr. Org. Synth.  
Dr Philip Newsholme
Morgan, D; Oliveira-Emilio, HR; Keane, D; Hirata, AE; da Rocha, MS; Bordin, S; Curi, R; Newsholme, P; Carpinelli, AR. (2007) 'Glucose, palmitate and pro-inflammatory cytokines modulate production and activity of a phagocyte-like NADPH oxidase in rat pancreatic islets and a clonal beta cell line'. Diabetologia, 50 (2):359-369.  
Kiely A, McClenaghan NH, Flatt PR and Newsholme P. (2007) 'Pro-inflammatory cytokines increase glucose, alanine and triacylglycerol utilisation but inhibit insulin secretion in a clonal pancreatic beta cell line'. Journal of Endocrinology, 195 :113-123.  
Newsholme P, Keane D, Welters H and Morgan N. (2007) 'Life and death decisions for the pancreatic beta cell - The role of fatty acids'. Clinical Science, 112 :27-42.  
Calder P, Dimitriadis G and Newsholme P. (2007) 'Glucose metabolism in lymphoid and inflammatory cells and tissues'. Curr Opin Clin Nutr Metab Care, 10 :531-540.  
Newsholme P, Haber EP, Hirabara SM, Rebelato ELO, Procopio J, Morgan D, Oliveira-Emilio HC, Carpinelli AR, Curi R. (2007) 'Diabetes associated cell stress and dysfunction – Role of mitochondrial and non-mitochondrial ROS production and activity'. Journal of Physiology, 583 :9-24.  
Curi, R; Newsholme, P; Procopio, J; Lagranha, C; Gorjao, R; Pithon-Curi, TC. (2007) 'Glutamine, gene expression, and cell function'. Frontiers in Bioscience, 12 (NA):344-357.  
Brennan, L; Hewage, C; Malthouse, JPG; McClenaghan, NH; Flatt, PR; Newsholme, P. (2006) 'Investigation of the effects of sulfonylurea exposure on pancreatic beta cell metabolism'. Febs Journal, 273 (22):5160-5168.  
Gorjão R, Verlengia R, Garcia Soriano F, Martins de Lima T, Cury Boaventura MF, Kanunfre C, Otton R, Peres CM, Sampaio SC, Folador A, Martins EF, Pithon Curi TC, Portiolli E, Newsholme P and Curi R. (2006) 'Effect of DHA rich fish oil supplementation on human leukocyte function'. Clinical Nutrition, 25 :923-938.  
Dr Jens Erik Nielsen
Dolinsky T, Czodrowski P, Li H, Nielsen JE, Jensen JH, Klebe G, Baker N. (2007) 'PDB2PQR: Expanding and upgrading automated preparation of biomolecular structures for molecular simulations'. Nucleic Acids Research, 35 :W522-W525. Available Online  
Schubert M, Poon D, Wicki J, Tarling C, Kwan E, Nielsen JE, Withers S, McIntosh L. (2007) 'Probing Electrostatic Interactions along the Reaction Pathway of a Glycoside Hydrolase: Histidine Characterization by NMR Spectroscopy'. Biochemistry, 46 (25):7383-7395. Available Online  
Tynan-Connolly, BM; Nielsen, JE. (2007) 'Redesigning protein pK(a) values'. Protein Science, 16 (2):239-249.  
Dr Kathy O'Boyle
Zaric V, Doyle D, Murphy PV, O'Boyle KM. (2007) 'Inhibition of endothelial cell proliferation by per-O-acetylated mannose conjugates'. Anticancer Research, 27 :1331-1335.  
Scalabrino GA/Hogan N, O'Boyle KM, Slator GR, Gregg DJ, Fitchett CM, Draper SM, Bennett GW, Hinkle PM, Bauer K, Williams CH, Tipton KF, Kelly JA. (2007) 'Discovery of a dual action first-in-class peptide that mimics and enhances CNS-mediated actions of thyrotropin-releasing hormone'. Neuropharmacology, 52 :1472-1481.  
Evers-Donnelly, A., O'Neill, C., O'Boyle, K., O'Connor, J.J. (2006) 'Modulation of dopamine release by cannabinoid receptor activation in rat striatal slices'. Irish Journal of Medical Science, 175 (3).  
O'Neill, C., Nolan, B., O'Boyle, K., O'Connor, J.J. (2006) 'SCH23390 attenuates A1 receptor-mediated inhibition of electrically evoked dopamine release from rat striatal slices'. British Journal of Pharmacology, 3 (4).  
Nolan B. and O'Boyle KM. (2006) 'Effects of adenosine receptor ligands on D1 dopamine receptors in rat striatum'. Irish Journal of Medical Science, 175 (1).  
Professor Colm O'Brien
Gao, W., Ferguson, G., Connell, P., Walshe, T., Murphy, R., Birney, Y. A., O'Brien, C., Cahill, P. A. (2007) 'High glucose concentrations alter hypoxia-induced control of vascular smooth muscle cell growth via a HIF-1alpha-dependent pathway'. J Mol Cell Cardiol, 42 (3):609-19.  
Horgan, N., Kirwan, R. P., O'Brien, C. J. (2007) 'Choroidal detachment associated with latanoprost use in the fellow eye'. Ann Pharmacother, 41 (1):161-2.  
Connell P, Walshe T, Ferguson G, Gao W, O'Brien C, Cahill PA. (2007) 'Elevated glucose attenuates agonist- and flow-stimulated endothelial nitric oxide synthase activity in microvascular retinal endothelial cells'. Endothelium, 14 (1):17-24.  
Dr Clare O'Connor
Plant, BJ; Ghani, S; O'Mahony, MJ; Morgan, L; O'Connor, CM; Morgan, K; Baugh, JA; Donnelly, SC. (2007) 'Sarcoidosis and MIF gene polymorphism: a case-control study in an Irish population'. European Respiratory Journal, 29 (2):325-329.  
Dr John O'Connor
Cumiskey D., Curran B.P., Herron, C.E, O’Connor J.J (2007) 'A role for inflammatory mediators in the IL-18 mediated attenuation of LTP in the rat dentate gyrus'. Neuropharmacology, 52 (8):1616-1623.  
O’Sullivan N.C., McGettigan P.A., Sheridan, G.K., Pickering, M., Conboy, L., O’Connor, J.J., Moynagh, P.N., Higgins, D.G., Regan, C.M., Murphy, K.J. (2007) 'Temporal change in gene expression in the rat dentate gyrus following passive avoidance learning'. Journal of Neurochemistry, 101 (4):1085-1098.  
Sheridan, G.K., Pickering, M., Twomey, C., Moynagh, P.N., O’Connor, J.J., Murphy, K.J. (2007) 'NFkB activity in distinct neural subtypes of the rat hippocampus: Influence of time and GABA antagonism in acute slice preparations'. Learning Memory, 14 (8):525-532.  
Cumiskey D., Pickering M., O’Connor J.J. (2006) 'Interleukin-18 mediated inhibition of LTP in the rat dentate gyrus is attenuated in the presence of mGluR antagonists'. Neuroscience Letters, 412 (3):206-210.  
Cumiskey, D., Butler, M.P., Moynagh, P.N. & O'Connor, J.J. (2006) 'Evidence for a role for the group 1 metabotropic glutamate receptor in the inhibitory effect of tumour necrosis factor-a on long-term potentiation'. Brain Research, 1136 (1):13-19.  
Dr Kevin O'Connor
Tobin, KM; O'Leary, ND; Dobson, ADW; O'Connor, KE; (2007) 'Effect of heterologous expression of phaG [(R)-3-hydroxyacyl-ACP-CoA transferase] on polyhydroxyalkanoate accumulation from the aromatic hydrocarbon phenylacetic acid in Pseudomonas species'. Fems Microbiology Letters, 268 (1):9-15.  
McMahon A., Doyle, E.M. and O’Connor, K.E. (2007) 'Biochemical characterisation of the coexisting tyrosinase and laccase in the soil bacterium Pseudomonas putida F6'. Enzyme and Microbial Technology, 40 :1435-1441.  
Nolan L. and O’ Connor, K.E. (2007) 'Use of bacterial cells expressing toluene-4-monooxygenase and cell free tyrosinase for the synthesis of 4-fluorocatechol from fluorobenzene'. Biotechnology Letters, 29 :1045-1050.  

Tobin K. M., McGrath, John W., Mullan, Alan and O'Connor, Kevin E. (2007) 'Polyphosphate accumulation by Pseudomonas putida CA-3 and other medium chain length polyhydroxyalkanoate accumulating bacteria under aerobic growth conditions'. Applied Environmental Microbiology, 73 :1383-1387.

 
Dr William O'Connor
O'Connor, W.J. (2007) 'Wave-Based Analysis and Control of Lump-Modeled Flexible Robots'. IEEE Transactions on Robotics, 23 :342-352.  
Kennedy, A, O’Connor W.J. (2007) 'A transmission line modelling (TLM) method for steady-state convection-diffusion'. International Journal for Numerical Methods in Engineering, 72 :1009-1028.  
O’Connor, W.J., McKeown, D.J., (2006) 'Wave-Echo Control of Lumped Flexible Systems'. Journal of Sound and Vibration, 298 (4-5):1001-1018.  
Dr Donal O'Shea
Gallagher, J.F., Le-Bas, M.-D. H., Coleman, C.M., O’Shea, D.F (2007) '6-(4-Fluorophenyl) -8-phenyl-2,3-dihydro-4H-imidazo[5,1-b][1,3]thiazin-4-one: An Unusual [6-5] Fused Ring System'. Acta Crystallography, C63 :160-165.  
Cottineau, B., O’Shea, D.F. (2007) '7-Azaindoles via carbolithiation of vinyl pyridines'. Tetrahedron, 63 :10354-10362.  
Cotter, J.; Hogan, A.-M.L.; O’Shea, D.F. (2007) 'Development and Application of a Direct Vinyl Lithiation of cis-Stilbene and a Directed Vinyl Lithiation of an Unsymmetrical cis-Stilbene'. Organic Letters, 9 :1493-1497. Available Online  
McKinley, N.F., O’Shea, D.F. (2006) 'Carbolithiation of Diphenylacetylene as a Stereoselective Route to (Z)-Tamoxifen and Related Tetra-substituted Olefin Analogues'. Journal of Organic Chemistry.  
Dr Francesca Paradisi
Nakazawa, N. et al. (2007) 'Disturbance of retinol transportation causes Nitrofen induced hypoplastic lung'. Journal of Paediatric Surgery, 42 :345-349.  
Paradisi, F. et al. (2007) 'The use of phenylalanine dehydrogenase mutants as efficient biocatalysts for the synthesis of non-natural phenylalanine derivatives'. Journal of Biotechnology, 128 :408-411.  
Professor Stephen Roy Pennington
Downes, MR; Byrne, JC; Pennington, SR; Dunn, MJ; Fitzpatrick, JM; Watson, RWG. (2007) 'Urinary markers for prostate cancer'. Bju International, 99 (2):263-268.  
Lau, TY; O'Connor, DP; Brennan, DJ; Duffy, MJ; Pennington, SR; Gallagher, WM; (2007) 'Breast cancer proteomics: clinical perspectives'. Expert Opinion on Biological Therapy, 7 (2):209-219.  
Govender P, Baugh JA, Pennington SR, Dunn MJ, Donnelly SC. (2007) 'Role of proteomics in the investigation of pulmonary fibrosis'. Expert Review of Proteomics, 4 (3):379-388.  
Donoghue PM, McManus CA, O'Donoghue NM, Pennington SR, Dunn MJ. (2006) 'CyDye immunoblotting for proteomics: co-detection of specific immunoreactive and total protein profiles'. Proteomics, 6 (24):6400-6424.  
Professor William Powderly
Malizia AP, Vioreanu MH, Doran PP, Powderly WG. (2007) 'HIV1 protease inhibitors selectively induce inflammatory chemokine expression in primary human osteoblasts'. Antiviral Res, 74 (1):72-76.  
Overton ET, Nurutdinova D, Sungkanuparph S, Seyfried W, Groger RK, Powderly WG. (2007) 'Predictors of immunity after hepatitis A vaccination in HIV-infected persons'. J Viral Hepat, 14 (3):189-193.  
Cade WT, Reeds DN, Mittendorfer B, Patterson BW, Powderly WG, Klein S, Yarasheski KE. (2007) 'Blunted lipolysis and fatty acid oxidation during moderate exercise in HIV-infected subjects taking HAART'. Am J Physiol Endocrinol Metab, 292 (3):812-819.  
Mondy, K; Overton, ET; Grubb, J; Tong, S; Seyfried, W; Powderly, W; Yarasheski, K; (2007) 'Metabolic syndrome in HIV-infected patients from an urban, midwestern US outpatient population'. Clinical Infectious Diseases, 44 (5):726-734.  
Malizia AP, Cotter E, Chew N, Powderly WG, Doran PP. (2007) 'HIV protease inhibitors selectively induce gene expression alterations associated with reduced calcium deposition in primary human osteoblasts'. AIDS Res Hum Retroviruses, 23 (2):243-250.  
Powderly, W.G. (2006) 'Antifungal treatment for cryptococcal meningitis'. Intern Med J, :404-405.  
Feeney, E., Muldoon, E. Powderly, W.G. (2006) 'Management of antiretoviral drug toxicity'. Current Opinion in HIV and AIDS, :430-436.  
Overton, T.E. Powderly, W.G. (2006) 'The future of CCR5 antagonists with a specific focus on Maraviroc'. Future virology 2006, :605-613.  
Professor Ciaran Regan
Conboy L, Seymour CM, Monopoli MP, O’Sullivan NC, Murphy KJ, Regan CM. (2007) 'Notch signalling becomes transiently attenuated during long term memory consolidation in adult Wistar rats'. Neurobiology of Learning and Memory, 88 :342-351.  
Medhurst AD, Atkins AR, Beresford IJ, Brackenborough K, Michael Briggs MA, Calver AR, Cilia J, Cluderay JE, Crook B, Davis JB, Davis RK, Davis RP, Dawson LA, Foley AG, Gartlon J, Gonzalez MI, Heslop T, Hirst W, Jennings C, Jones DNC, Lacroix LP, Martyn A, Ociepka S, Ray A, Regan CM, Roberts JC, Schogger J, Southam E, Stean TO, Trail BK, Upton N, Wadsworth G, Wald JA, White T, Witherington J, Woolley ML, Worby A, Wilson DM (2007) 'GSK189254 - a novel H3 receptor antagonist that binds to histamine H3 receptors in Alzheimer’s Disease brain and improves cognitive performance in preclinical models'. Journal of Pharmacology and Experimental Therapeutics, 321 :1032-1045.  

Medhurst AD, Briggs MA, Bruton G, Calver AR, Chessell I, Crook B, Davis JB, Davis RP, Foley AG, Heslop T, Hirst WD, Medhurst SJ, Oceipka S, Ray A, Regan CM, Sargent B, Schogger J, Stean TO, Trail BK, Upton N, Wald JA, White T, Wilson DM, Orlek B. (2007) 'Structurally novel histamine H3 receptor antagonists GSK207040 and GSK334429 improve scopolamine-induced memory impairment and capsaicin-induced secondary allodynia'. Biochemical Pharmacology, 73 :1182-1194.  
O’Sullivan NC, McGettigan PA, Sheridan GK, Pickering M, Conboy L, O’Connor JJ, Moynagh PN, Higgins DG, Regan CM, Murphy KJ. (2007) 'Temporal change in gene expression in the rat dentate gyrus following passive avoidance learning'. Journal of Neurochemistry, 101 :1085-1098.  
Hirst, WD; Stean, TO; Rogers, DC; Sunter, D; Pugh, P; Moss, SF; Bromidge, SM; Riley, G; Smith, DR; Bartlett, S; Heidbreder, CA; Atkins, AR; Lacroix, LP; Dawson, LA; Foley, AG; Regan, CM; Upton, N. (2006) 'SB-399885 is a potent, selective 5-HT6 receptor antagonist with cognitive enhancing properties in aged rat water maze and novel object recognition models'. European Journal of Pharmacology, 553 (1-3):109-119.  
Dr Wilhelm Risse
Curran, K., Risse, W., Boggioni, L., Tritto, I. (2007) 'Olefin Addition Polymerisation of Cyclobutene-Type Monomers with Early and Late Transition Metal Compounds'. Polymer Preprints, 48 (1).  
Professor Mark S Rogers
Espinosa, J. C. Morales, M. Castilla, J. Rogers, M., and Torres, J. M. (2007) 'Progression of prion infectivity in asymptomatic cattle after oral bovine spongiform encephalopathy challenge'. Journal of General Virology, 88 (4):1379-1383. Available Online  
Professor Mike Scott
Karpuj, M., Giles, K., Gelibter, S., Scott, M., Lingappa, V., Szoka, F., Peretz, D., Denetclaw, W. Prusiner, S.B. (2007) 'Phosphorothioate oligonucleotides reduce PrPSc levels and prion infectivity in cultured cells'. Molecular Medicine, 13 (3-4):190-198.  
Professor Denis Shields
Moore, N., Dicker, P., O'Brien, J. K., Stojanovic, M., Conroy, R. M., Treumann, A., O'Brien, E. T., Fitzgerald, D., Shields, D., Stanton, A. V. (2007) 'Renin gene polymorphisms and haplotypes, blood pressure, and responses to renin-angiotensin system inhibition'. Hypertension, 50 (2):340-7.  
Davey, N. E., Edwards, R. J., Shields, D. C. (2007) 'The SLiMDisc server: short, linear motif discovery in proteins'. Nucleic Acids Res, 35 (Web Server issue):W455-9.  
Ryan, A. W., O'Brien, E., Shields, D., McManus, R. (2007) 'Lack of association between NFKBIL1/LTA polymorphisms and hypertension, myocardial infarct, unstable angina and stable angina in a large Irish population sample'. Atherosclerosis.  
Edwards, RJ; Moran, N; Devocelle, M; Kiernan, A; Meade, G; Signac, W; Foy, M; Park, SDE; Dunne, E; Kenny, D; Shields, DC; (2007) 'Bioinformatic discovery of novel bioactive peptides'. Nature Chemical Biology, 3 (2):108-112.  
Laing, Mary E., Dicker, Patrick, Moloney, Fergal J., Murphy, Gillian M., Conlon, Peter, Whitehead, Alexander S., Shields, Denis C. (2007) 'Association of Methylenetetrahydrofolate reductase (MTHFR) polymorphism and the risk of Squamous Cell Carcinoma in renal transplant patients'. Transplantation..  
Baran, Ivan, Svobodova Varekova, Radka,  Parthasarathi, Laavanya, Suchomel, Simon, Casey, Fergal, Shields, Denis C. (2007) 'Identification of Potential Small Molecule Peptidomimetics Similar to Motifs in Proteins'. Journal Chem Inf Model.  
Johnston, CR; O'Dushlaine, C; Fitzpatrick, DA; Edwards, RJ; Shields, DC; (2007) 'Evaluation of whether accelerated protein evolution in chordates has occurred before, after, or simultaneously with gene duplication'. Molecular Biology and Evolution, 24 (1):315-323.  
Moran N, Kiernan A, Dunne E, Edwards RJ, Shields DC, Kenny D. (2006) 'Monitoring modulators of platelet aggregation in a microtiter plate assay'. Analytical Biochemistry, 357 :77-84.  
Dr Peter Smyth
Smyth, P. P., Smith, D. F., Sheehan, S., Higgins, M., Burns, R., O'Herlihy, C. (2007) 'Short-term changes in maternal and neonatal urinary iodine excretion'. Thyroid, 17 (3):219-22.  
Dijkstra, B., Prichard, R. S., Lee, A., Kelly, L. M., Smyth, P. P., Crotty, T., McDermott, E. W., Hill, A. D., O'Higgins, N. (2007) 'Changing patterns of thyroid carcinoma'. Ir J Med Sci, 176 (2):87-90.  
Dr Cosima Stubenrauch
Buchavzov, N., Ravera, F., Hess, S., Liu, Y., Steinbrenner, U., Stubenrauch, C. (2007) 'Interfacial Tensions, Partition Coefficients, and Interfacial Elasticities: Measures for Emulsion Stability?'. Tenside Surf. Det, 44 (230).  
Varade, D., Aramaki, K., Stubenrauch, C. (2007) 'Phase Diagrams of Water - Alkyltrimethylammonium Bromide Systems'. Colloids and Surfaces A, DOI:10.1016/j.colsurfa.2007.07.031.  
Blunk, D., Tessendorf, R., Buchavzov, N., Strey, R., Stubenrauch, C. (2007) 'Purification, Surface Tensions, and Miscibility Gaps of Alkyldimethyl and Alkyldiethyl Phosphine Oxides'. Journal of Surfactants and Detergents, 10 (155).  
Frank, C., Strey, R., Schmidt, C., Stubenrauch, C. (2007) 'Coexisting lamellar phases in water - oil - surfactant systems induced by the addition of an amphiphilic block copolymer (Invited Article)'. Journal of Colloid and Interface Science, 312 (76).  
Stubenrauch, C., Tessendorf, Strey, R., Lynch, I., Dawson, K. (2007) 'Gelled Polymerisable Microemulsions - Part I: Phase Behavior'. Langmuir, 23 (7730).  
Buchavzov, N., Stubenrauch, C. (2007) 'A Disjoining Pressure Study of Foam Films Stabilized by Mixtures of Nonionic and Ionic Surfactants'. Langmuir, 23 (5315).  
Angarska, J., Stubenrauch, C., Manev, E. (2007) 'Drainage of Foam Films stabilized with Mixtures of Non-ionic Surfactants'. Colloids and Surfaces A, 309 (189).  
Stubenrauch, C., Cohen, R., Exerowa, D. (2007) 'A pH-Study of n-Dodecyl-beta-D-maltoside Foam Films'. Langmuir, 23 (1684).  
Santini, E., Ravera, F., Ferrari, M., Stubenrauch, C., Makievski, A., Krägel, J. (2007) 'A surface rheological study of non-ionic surfactants at the water-air interface and the stability of the corresponding thin foam films'. Colloids and Surfaces A, 298 (12).  
Grigoriev, D., Stubenrauch, C. (2007) 'Surface elasticities of aqueous n-dodecyl-beta-D-maltoside solutions: a capillary wave study'. Colloids and Surfaces A, 296 (67).  
Blunk, D., Bierganns, P., Bongartz, N., Tessendorf, R., Stubenrauch, C. (2006) 'New Speciality Surfactants with Natural Structural Motifs (Invited Review)'. New Journal of Chemistry, 30 (1705).  
Claesson, P.M., Kjellin, M., Rojas, O.J., Stubenrauch, C. (2006) 'Short-range interactions between non-ionic surfactant layers (Invited Review)'. Physical Chemistry Chemical Physics, 8 (5501).  
Dr Torres Sweeney
O'Brien, S.B., M. Lenahan, T. Sweeney, and J.J. Sheridan. (2007) 'Assessing the hygiene of pig carcasses using whole body carcass swabs compared to the four-site method in EC Decision 471'. Journal of Food Protection, 70 (2):432-439.  
Sweeney T, Fox J, Robertson L, Kelly G, Lonergan P, Roche JF and Evans NP. (2007) 'Postnatal exposure to octylphenol decreases semen quality in the adult ram'. Theriogenology, 67 :1068-1075.  
Costello, S., O’Doherty, E., Troy, D.J., Kim, K.-S., Ernst, C.W., Sweeney, T., Mullen, A.M. (2007) 'The relationship between polymorphisms in the calpain I, calpain II and growth hormone genes and tenderness in bovine M. longissimus dorsi'. Meat Science, 75 :551-557.  
Negredo, C., Monks, E, Sweeney T. (2007) 'A novel real-time ultrasonic method for prion protein detection using plasminogen as a capture molecule'. BMC Biotechnology, 7 .  
Sweeney T, O’Doherty E. and Hanrahan J.P. (2007) 'Is there a relationship between prion protein genotype and ovulation rate and litter size in sheep?'. Animal Reproduction Science, 101 :153-157.  
Lynch MB, Sweeney T, Callan JJ and O'Doherty JV. (2007) 'The effect of dietary barley level on nutrient digestibility, nitrogen excretion, intestinal microflora and volatile fatty acid concentration in finishing pigs'. Livestock Science, 109 :236-239.  
Lynch MB, Sweeney T, Callan JJ and O'Doherty JV. (2007) 'The effect of dietary crude protein concentration and inulin supplementation on nutrient digestibility, nitrogen excretion, intestinal microflora and manure ammonia emissions fro m finisher pigs'. Livestock Science, 109 :204-207.  
Lynch MB, Sweeney T, Callan JJ Flynn B, and O'Doherty JV. (2007) 'The effect of high and low dietary crude protein and inulin supplementation on nutrient digestibility, nitrogen excretion, intestinal microflora and manure ammonia emissions from finisher pigs'. Animal, 1 :1112-1121.  
Dr Matthias Tacke
Pampillón, C., Claffey, J., Hogan, M., Tacke, M. (2007) 'Morpholino-Functionalised and Heteroaryl-Substituted Titanocene Anticancer Drugs: Synthesis and Cytotoxicity Studies'. Zeitschrift fuer Anorganische und Allgemeine Chemie, 633 (10):1695-1700.  
Müller-Bunz, H., Dix, I., Lou, Y., Pampillón, C., Strohfeldt, K., Sweeney, N.J., Tacke, M. (2007) 'A series of novel 6-aryl fulvenes: Impact of substitution on the phenyl ring, characterised by X-Ray crystallography'. Zeitschrift Fur Krystallographie, 222 (7):376-882.  
Pampillón, C., Claffey, J., Hogan, M., Strohfeldt, K., Tacke, M. (2007) 'Synthesis and Cytotoxicity Studies of New Dimethylamino-Functionalised and Indolyl-Substituted Titanocene Anti-Cancer Drugs'. Transition Metal Chemistry, 32 (4):434-441.  
Pampillón, C., Sweeney, N.J., Strohfeldt, K., Tacke, M. (2007) 'Synthesis and Cytotoxicity Studies of New Dimethylamino-Functionalised and Heteroaryl-Substituted Titanocene Anti-Cancer Drugs'. Journal of Organometallic Chemistry, 692 (11):2153-2159.  
Hogan, M., Claffey, J., Pampillón, C., Watson, R.W.G., Tacke, M. (2007) 'Synthesis and Cytotoxicity Studies of New Dimethylamino-Functionalised and Azole-Substituted Titanocene Anti-Cancer Drugs'. Organometallics, 26 (10):2501-2506.  
Oberschmidt, O., Hanauske, A-R., Pampillón, C., Strohfeldt, K., Sweeney, N.J., Tacke, M. (2007) 'Activity of Titanocene Y against Tumor Colony Forming Units'. Anti-Cancer Drugs, 18 (3):317-321.  
Beckhove, P., Hanauske, A-R., Oberschmidt, O., Pampillón, C., Schirrmacher, V., Sweeney, N.J., Strohfeldt, K., Tacke, M. (2007) 'Antitumor Activity of Titanocene Y in Freshly Explanted Human Breast Tumors and in Xenografted MCF-7 Tumors in Mice'. Anti-Cancer Drugs, 18 (3):311-315.  
Sweeney, NJ; Claffey, J; Muller-Bunz, H; Pampillon, C; Strohfeldt, K; Tacke, M. (2007) 'The synthesis and cytotoxic evaluation of a series of benzodioxole substituted titanocenes'. Applied Organometallic Chemistry, 21 (2):57-65.  
Sweeney, NJ; Claffey, J; Muller-Bunz, H; Pampillon, C; Strohfeldt, K; Tacke, M. (2007) 'The synthesis and cytotoxic evaluation of a series of benzodioxole substituted titanocenes'. Applied Organometallic Chemistry, 21 :57-65.  
Dr Cormac Taylor
Ryan, S., Nolan, G. M., Hannigan, E., Cunningham, S., Taylor, C., McNicholas, W. T. (2007) 'Cardiovascular risk markers in obstructive sleep apnoea syndrome and correlation with obesity'. Thorax, 62 (6):509-14.  
Taylor, C. T., Keely, S. J. (2007) 'The autonomic nervous system and inflammatory bowel disease'. Auton Neurosci, 133 (1):104-14.  
Barry RE, Allan BB, Cummins EP, Kattla JJ, Giblin A, Scally N, Taylor CT, Brazil DP. (2007) 'Enhanced sensitivity of protein kinase B/Akt to insulin in hypoxia is independent of HIF1alpha and promotes cell viability'. European Journal of Cell Biology, 86 (7):393-403.  
Ryan, S, McNicholas, WT & Taylor, CT. (2007) 'A critical role for p38 MAP kinase in NF-kB signaling during intermittent hypoxia / reoxygenation'. Biochemical and Biophysical Research Communications, 355 (3):728-733.  
Leonard, M. O., Kieran, N. E., Howell, K., Burne, M. J., Varadarajan, R., Dhakshinamoorthy, S., Porter, A. G., O'Farrelly, C., Rabb, H., Taylor, C. T. (2006) 'Reoxygenation-specific activation of the antioxidant transcription factor Nrf2 mediates cytoprotective gene expression in ischemia-reperfusion injury'. Faseb J.  
Dr Edward Timoshenko
Bellesia, G; Fedorov, MV; Timoshenko, EG. (2007) 'Molecular dynamics study of structural properties of beta-sheet assemblies formed by synthetic de novo oligopeptides'. Physica A-Statistical Mechanics and it's Applications, 373 (NA):455-476.  
Dr Douglas Veale
Smith MD, Baeten D, Ulfgren AK, McInnes IB, Fitzgerald O, Bresnihan B, Tak PP, Veale D.(2006) 'OMERACT synovial special interests group. Standardisation of synovial tissue infiltrate analysis: how far have we come? How much further do we need to go?'. Annals of Rheumatic Diseases, 65 (1):93-100.  
Dr Dominic Walsh
Shankar, Ganesh M., Townsend, Matthew, Walsh, Dominic M., Selkoe, Dennis J. and Sabatini, Bernardo L. (2007) 'Natural oligomers of the Alzheimer amyloid-beta protein lower dendritic spine density and synapse number in hippocampus'. Journal of Neuroscience, 27 :2866-2875.  
Walsh, Dominic M. and Selkoe, Dennis J. (2007) 'Abeta oligomers - a decade of discovery'. Journal of Neurochemistry, 101 :1172-1180.  
Farris, Wesley, Schütz, Sonja, Cirrito, John R., Shankar, Ganesh M., Sun, Xioayan,  May, Patrick C., George, Ana, Leissring, Malcolm A., Walsh, Dominic M, Qiao Qiu, Wei, Holtzman, David M., Selkoe, Dennis J. (2007) 'Loss of neprilysin function promotes amyloid plaque formation and precipitates cerebral amyloid angiopathy'. American Journal of Pathology, 171 (1):241-251.  
Dr Bill Watson
Morrissey C, Brown M, O'Sullivan J, Weathered N, Watson RW, Tenniswood M. (2007) 'Epigallocatechin-3-gallate and bicalutamide cause growth arrest and apoptosis in NRP-152 and NRP-154 prostate epithelial cells'. Int J Urol, 14 (6):545-551.  
Healy DG, Wood AE, O'Neill A, McCarthy JF, Fitzpatrick JM, Watson RW. (2007) 'Can preoperative modelling of individual neutrophil adhesion responses predict renal morbidity?'. Eur J Cardiothorac Surg, 31 (6):1088-1093.  
Perry AS, Loftus B, Moroose R, Lynch TH, Hollywood D, Watson RW, Woodson K, Lawler M. (2007) 'In silico mining identifies IGFBP3 as a novel target of methylation in prostate cancer'. British Journal of Cancer, 96 (10):1587-1594.  
Burke, JP; Mulsow, JJ; O'Keane, C; Docherty, NG; Watson, RWG; O'Connell, PR. (2007) 'Fibrogenesis in Crohn's disease'. American Journal of Gastroenterology, 102 (2):439-448.  
Downes, MR; Byrne, JC; Pennington, SR; Dunn, MJ; Fitzpatrick, JM; Watson, RWG. (2007) 'Urinary markers for prostate cancer'. BJU International, 99 (2):263-268.  
McGuire BB, Watson RW, Perez-Barriocanal F, Fitzpatrick JM, Docherty NG. (2007) 'Gender differences in the renin-angiotensin and nitric oxide systems: relevance in the normal and diseased kidney'. Kidney Blood Press Res, 30 (2):67-80.  
Healy, DG; Watson, RWG; Fitzpatrick, JM; Wood, AE. (2007) 'Differential white cell count relationships with human cardiac allograft rejection'. Transplantation Proceedings, 39 (1):218-222.  
Dr Xiangming Zhu
Zhu, X., Jin, Ying, Wickham, John (2007) 'Efficient Synthesis of Methylene exo-Glycal: Another Use of Glycosylthiomethyl Chlorides'. Journal of Organic Chemistry, 72 :2670-2673.  
Zhu, X., Kawatkar, S., Rao, Y., Boons, G.J. (2006) 'A Practical Approach for the Stereoselective Introduction of ?-L-Arabinofuranosides'. Journal of the American Chemistry Society, 128 :11948-11957.  
Dr Peadar Ó Gaora
Drudy D, Quinn T, O'Mahony R, Kyne L, O'Gaora P, Fanning S. (2006) 'High-level resistance to moxifloxacin and gatifloxacin associated with a novel mutation in gyrB in toxin-A-negative, toxin-B-positive Clostridium difficile'. Journal of Antimicrobial Chemotherapy, 58 (6):1264-1267.  
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Other Journals


Professor John Bannigan
Thompson, J., Hipwell, E., Voon Loo, H. Bannigan, J. (2006) 'Effects of cadmium on cell death and cell proliferation in chick embryos' Reproductive Toxicology.  
Dr Billy Bourke
Finn, S.M., Rowland, M., Lawlor, F., Kinsella, W., Chan, L., Byrne, O., O'Mahony, O. Bourke, B. (2006) 'The significance of cutaneous spider maevi in children' Arch Dis Child.  
Dr Derek P Brazil
Roxburgh SA, Murphy M, Pollock CA, Brazil DP. (2006) 'Recapitulation of Embryological Programmes in Renal Fibrosis - The Importance of Epithelial Cell Plasticity and Developmental Genes' Nephron Physiol, 103 :139-148.  
Professor Barry Bresnihan
Bresnihan, B. (2006) 'Synovial biomarkers in the spondylarthropathies' Curr Opin Rheumatol.  
Dr Katrina May Comerford
Comerford, K.M., Leonard, M.O., Cummins, E.P., Fitzgerald, K., Beullens, M., Bollen, M. Taylor C.T. (2006) 'Regulation of progin phosphatase 1 activity in hypoxia through increased interaction with NIPP1: implications for cellular metaboliism' J.Cell Physiol.  
Professor Peter Dervan
Wells et al (Editor) (2006) 'European guidelines for quality assurance in breast cancer screening and diagnosis. Fourth Edition. European Commission. Coauthor on Pathology section. Quality assurance guidelines for pathology'.  
Dr Seamas Donnelly
Naji, N.A., Connor, C.M., Donnelly, S.C. McDonnell, T.J. (2006) 'Effectiveness of pulmonary rehabilitation in restrictive lung disease' j Cardiopulm Rehabil.  
Professor Michael J. Dunn
Zhou, S., Mann, C.J., Dunn, M.J., Preedy, V.R., Emery, P. (2006) 'Measurement of specific radioactivity in proteins separated by two-dimensional gel electrophoresis' Electrophoresis.  
Dunn, M.J. (2006) 'PROTEOMICS - Continued growth and comprehensive coverage' Proteomics.  
Byrne, J; Downes, M; O'Donoghue, N; Dunn, MJ; Fitzpatrick, JM; Watson, RWG; Pennington, SR. (2006) 'Utilising proteomic platforms for the identification of novel serum markers of prostate cancer' European Urology Supplements.  
Professor Paul Engel
Wang, X.T., Lam V.M.S. & Engel, P.C. (2006) 'Functional properties of two mutants of human glucose 6-phosphate dehydrogenase, R393G and R393H, corresponding to the clinical variants G6PD Wisconsin and Nashville' Biochimica et Biophysica Acta (Molecular Basis of Disease), 1762 :767-774.  
Paradisi, F., Collins, S., Maguire, A.R. & Engel, P.C. (2006) 'The use of phenylalanine dehydrogenase mutants as efficient catalysts for the synthesis of non-natural amino acids: scale-up process'.  
Professor Alexander Evans
Evans, A.C.O., Zielak, A. and Forde, N. (2007) 'Will a better understanding of follicle development solve the fertility problem in cattle?' Cattle Practice, 15 (1):13-17.  
Professor Desmond Joseph Fitzgerald
Toomey, S., Harhen,B., Roche, H.M., Fitzgerald, D., Belton, O. (2006) 'Profound resolution of early atherosclerosis with conjugated linoleic acid' Atherosclerosis.  
Professor Patrick Guiry
Quinn, S.T., Guiry, P.J., Schwabb, T., Keenan, A.K.; McBean, G.J. (2006) 'Blockade of noradrenaline transport abolishes 4-methylthioamphetamine-induced contraction of the rat aorta in vitro' J. Autonomic & Autacoid Pharm.  
Professor William Hall
Schaffer, K., Sheehy, N., Coughlan, S., Bergin, C., Hall, W.W. (2006) 'JC virus in the Irish population: Significant increase of genotype 2 in immunocompromised individuals' Journal of Neurovirology.  
Ishak, R., Vallinotor, A.C., Azevedo, V.N., Vicente, A.C., Hall, W.W., Ishak, M.O. (2006) 'Molecular evidence for infection by HTLV-2 among individuals with negative serological screening te4sts for HTLV antibodies' Epidemiol Infection.  
Castro-Costa, C.M., Araujo, A.Q., Barreto, M.M., Takayanagui, O.M., Sohler, M.P., Silva, E.L., Paula, S.M., Ishark, R., Ribas, J.G., Rovirosa, L.C., Carton, H., Gotuzzo, E., Hall, W.W., Montano, S., Murphy, E.L., Oger, J., Remondegui, C., Taylor, G.P. (2006) 'Proposal for Diagnostic Criteria of Tropical Spastic Paraparesis/HTLV-1-Associated Myelopathy 9TSP/HAM)'. AIDS Res Hum Retroviruses.  
Dr Clare O'Connor
Courtney, J.M., Plant, B.J., Morgan, K., Rendall, J., Gallagher, C., Ennis, M., Kalsheker, N., Elborn, S. O’Connor, C.M. (2006) 'Association of improved pulmonary phenotype in Irish Cystic Fibrosis patients with a 3’ enhancer polymorphism in alpha-1-antitrypsin' Ped Pulm.  
Naji, N.A., Connor, C.M., Donnelly, S.C. McDonnell, T.J. (2006) 'Effectiveness of pulmonary rehabilitation in restrictive lung disease' j Cardiopulm Rehabil.  
Dr Francesca Paradisi
Paradisi, F., Collins, S., Maguire, A.R. & Engel, P.C. (2006) 'The use of phenylalanine dehydrogenase mutants as efficient catalysts for the synthesis of non-natural amino acids: scale-up process'.  
Professor William Powderly
Chew NS, Doran PP, Powderly WG. (2007) 'Osteopenia and osteoporosis in HIV and AIDS: pathogenesis and treatment' Current Opinion in HIV and AIDS, 2 :318-323.  
Powderly WG. (2007) 'The Three Ages of Antiretroviral Therapy - its Evolution and the Emergence of Long-term Safety Concerns' European Infectious Diseases, 1 :19-25.  
Overton TE, Powderly WG. (2006) 'The future of CCR5 antagonists with a specific focus on Maraviroc' Future Virology, 1 :605-613.  
Dr Peter Smyth
Nawoor Z, Burns R, smith DF, Sheehan S, O'Herlihy C, Smyth PPA. (2006) 'Iodine intake in pregnancy in Ireland - a cause for concern?' Ir J Med Sci.  
Dr Matthias Tacke
O’Connor, K., Gill, C., Tacke, M., Rehmann, F.-J. K., Strohfeldt, K., Sweeney, N., Fitzpatrick, J. M., Watson, R. W. G. (2006) 'Novel Titanocene Anti-Cancer Drugs and their Effect on Apoptosis and the Apoptotic Pathway in Prostate Cancer Cells' Apoptosis.  
Dr Cormac Taylor
Molloy, E.J., O'Neill, A.J., Doyle, B.T., Grantham, J.J., Taylor, C.T., Sheridan-Pereira, M., Fitzpatrick, J.M. Watson, R.W.G. (2006) 'Effects of heat shock and hypoxia on neonatal neutrophil lipopolysaccharide responses: altered apoptosis, toll-like receptor-4 and CD11b expression compared with adults' Biology of the Neonate.  
Comerford, K.M., Leonard, M.O., Cummins, E.P., Fitzgerald, K., Beullens, M., Bollen, M. Taylor C.T. (2006) 'Regulation of progin phosphatase 1 activity in hypoxia through increased interaction with NIPP1: implications for cellular metaboliism' J.Cell Physiol.  
Dr Bill Watson
O’Connor, K., Gill, C., Tacke, M., Rehmann, F.-J. K., Strohfeldt, K., Sweeney, N., Fitzpatrick, J. M., Watson, R. W. G. (2006) 'Novel Titanocene Anti-Cancer Drugs and their Effect on Apoptosis and the Apoptotic Pathway in Prostate Cancer Cells' Apoptosis.  
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Conference Publications


Professor Mohamed Al-Rubeai
Buckler A. and Al-Rubeai M. (2007) The effect of genetically modified insulin growth factor on cell proliferation and adenovirus productivity in serum free medium . In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, Harrowgate UK, 619 - 622. Available Online  
Clee P. and Al-Rubeai M. (2007) Media and cell manipulation approaches to the reduction of adaptation time in GS NS0 cell line . In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, 381 - 383. Available Online  
Astley K. L. and Al-Rubeai M. (2007) Adaptation without cell division? Enhanced adaptation to suspension and serum free culture by the co-expression of p21 and Bcl-2. In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, 107 - 110. Available Online  
Veraitch F. and Al-Rubeai M. (2007) The expression of the neo gene in GS-NS0 cells increases their proliferative capacity . In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, Harrowgate UK, 157 - 162. Available Online  
Shah D., Clee P., Boisen S., Al-Rubeai M. (2007) NucleoCounter – An efficient technique for the determination of Cell Number and Viability in Animal Cell Culture Processes . In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, Harrowgate UK, 535 - 538. Available Online  
Khoo G., Falciani F., Al-Rubeai M. (2007) Microarray analysis of metabolically engineered NS0 cell lines producing chimeric antibody . In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, Harrowgate UK, 47 - 52. Available Online  
Sandhu K. S. and Al-Rubeai M. (2007) Flow cytometry as a tool for process monitoring of virus-cell systems . In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, 571 - 573. Available Online  
Melero-Martin J., Santhalingam S., Al-Rubeai M. (2007) Large-scale expansion of cells for use as therapeutic agents. In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, Harrowgate UK, 335 - 338. Available Online  
Crea F., Sarti D., Falciani F., Al-Rubeai M. (2007) Growth, Apoptosis and Functional Genomics Analysis of CHO-K1 Over-Expressing Telomerase . In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, Harrowgate UK, 41 - 45. Available Online  
Ifandi V. and Al-Rubeai M. (2007) Influence of c-myc and bcl-2 co-expression on proliferation, apoptosis and survival of CHO cultures. In: Cell Technology for Cell Products. Springer, London. Smith R eds. 19th ESACT Meeting, Harrowgate UK, 217 - 220. Available Online  
Dr Orina Belton
McClelland S, Ballou L, Fitzgerald D, Belton O. (2007) COX-2 gene deletion increases advanced aortic arch atherosclerosis in the apoE-/- mouse model. 8th Annual Conference on Atherosclerosis Thrombosis and Vascular Biology.  
McClelland S, Fitzgerald D, Belton O. (2007) Conjugated linoleic acid alters the pro-atherosclerotic phenotype of the monocyte/macrophage- evidence for the involvement of a novel signalling pathway. European Atherosclerosis Society 76th Congress.  
Professor Sean Callanan
Fletcher NF, Brayden DJ, Brankin B and Callanan JJ. (2006) The interaction of feline immunodeficiency virus with a cell culture model of the feline blood brain barrier. International Feline Retrovirus Research Symposium, Washington DC.  
Dr Eoin Casey
Syron, Eoin, Casey, Eoin (2007) Characterization of biofilm detachment using a novel bioreactor. American Society for Microbiology, Biofilms 2007, Quebec, Canada, 141 - 141.  
Casey, E. (2007) Simulation studies of process scale membrane aerated biofilm reactor configurations 4th International Water Association Membranes Conference, Harrogate, UK.  
Heffernan, Barry, Bryan, Una, Murphy, Cormac, Casey, Eoin (2007) Investigation of the effect of 2-fluorobenzoate on respiratory location in a stratified Pseudomonas fluorescens biofilm. American Society for Microbiology, Biofilms 2007, Quebec, Canada, 150 - 150.  
Cotter, John J., O’Gara, James P., Stewart, Philip S., Pitts, Betsey, Casey, Eoin (2007) Contribution of oxygen to Staphylococcus epidermidis biofilm development and antibiotic susceptibility. American Society for Microbiology, Biofilms 2007, Quebec, Canada, 172 - 173.  
Heffernan, B., Phelan, S., Murphy, C., Casey, E. (2006) Investigation of the effect of respiratory location in a stratified Pseudomonas fluorescens biofilm on overall activity for an inhibitory substrate. IWA Conference on Biofilm Systems VI, Amsterdam, the Netherlands.  
Cotter, J.J., O’Gara J.P., Casey E. (2006) Analysis of Staphylococcus epidermidis 1457 biofilm grown in a Rotating-Disk Reactor (RDR) under defined oxygen concentrations. International Symposium on Staphylococci & Staphylococcal Infections, Maastricht, The Netherlands.  
Syron, E. and, Casey, E. (2006) Dynamics of active layer stratification in a membrane-aerated biofilm. IWA Conference on Biofilm Systems VI, Amsterdam, the Netherlands.  
Professor Alexander Evans
Carter, F., Fair, T., Park, S., Wade, M., Evans, A.C.O. and Lonergan, P. (2007) Gene expression profiling of immature and in vitro-matured bovine oocytes using affymetrix genechip technology. In: Reproduction Fertility Development, 19 eds. Annual Conferance of the International Embryo Transfer Society, Kyoto, Japan, 248 - 248.  
Smith, N., Lonergan, P., Duffy, P., Crosby, T.F., McAuliffe, F. and Evans, A.C.O. (2007) Undernutrition during the periconceptional period in ewes affects the blood pressure and weight of their neonatal lambs. In: Reprodcution Fertility Development, 19 eds. Annual Conferance of the International Embryo Transfer Society, Kyoto, Japan, 194 - 194.  
Berry, D.P., Lonergan, P., Butler, S.T. and Evans, A.C.O. (2007) Dairy cow energy status early in pregnancy does no affect the reproductive performance of primiparous female progeny. 58th Annual meeting of European Association for Animal Production, Dublin, Ireland, 22.11 - 22.11.  
Berry, D.P., Lonergan, P., Butler, S.T., Cromie, A.R., Mossa, F., Fair, T. and Evans, A.C.O. (2007) Adult dairy cow performance is influenced by intrauterine environment. In: M Royal eds. An International Conference: Fertility in Dairy Cows, bridging the gaps, Liverpool, UK, 40 - 40.  
Zielak, A.E., Ward, F., Forde, N., Mossa, F., Lonergan, P., Smith, G.W., Ireland, J.J. and Evans, A.C.O. (2007) Comparison of ovarian follicles at follicle wave emergence between heifers with high versus low numbers of follicles. In: M Royal eds. An International Conference: Fertility in Dairy Cows, bridging the gaps, Liverpool, UK, 14 - 14.  
Mossa, F., Butler, S., Duffy, D., Jimenez-Krassel, F., Folger, J., Smith, G.W., Lonergan, P., Ireland, J.J. and Evans, A.C.O. (2007) Distribution of follicle numbers in diary cows aged from 2 to 11 years. In: M Royal eds. An International Conference: Fertility in Dairy Cows, bridging the gaps, Liverpool, UK, 37 - 37.  
Carter, F., Forde, N., Duffy, P., Wade, M., Fair, T., Crowe, M.A., Evans, A.C.O., Roche, J.F. and Lonergan, P. (2007) Progesterone profiles and embryo development in beef heifers with elevated progesterone concentrations. In: M Royal eds. An International Conference: Fertility in Dairy Cows, bridging the gaps, Liverpool, UK, 9 - 9.  
de Feu, M., Evans, A.C.O., Lonergan, P. and Butler, S. (2007) Effects of dry period duration and dietary energy density on transition period metabolic status and postpartum ovarian function in dairy cows. In: M Royal eds. An International Conference: Fertility in Dairy Cows, bridging the gaps, Liverpool, UK, 41 - 41.  
Smith, G.W., Rosa, G.J.M., Coussens, P.M., Halgren, R., Evans, A.C.O., Mihm, M., Lonergan, P., Ireland, J.J. (2006) Interpretation of microarray data: Trudging out of the abyss towards elucidation of biological significance. Triennial Reproduction Symposium at the American Society of Animal Science,/American Dairy Science Association, July 2006.  

Dr Trudee Fair
Doyle, J., Ellis, S.A., Lonergan, P., and Fair, T. (2007) Classical and Non-Classical Major Histocompatability Complex Class I Gene Expression in In Vitro Derived Embryos1. International Embryo Transfer Association, Kyoto, Japan.  
Dr Jana Haase
Grudzinska J., Malynn S., Müller H., Corbett D. and Haase J. (2007) Analysis of Serotonin Transporter Interacting Proteins - A Proteomic Approach. LifeSciences 2007.  
Grudzinska J, Malynn S, Müller H, Haase J. (2006) Analysis of Serotonin Transporter Interacting Proteins - A Proteomic Approach. Neuroscience Ireland Inaurgural Conference.  
Professor Therese Kinsella
Reid, Helen M.  & Kinsella, B. Therese (2007) Palmitoylation of the TP isoform of the human thromboxane A2 receptor LifeSciences2007, Glasgow, UK.  
Gannon, Anne-Marie & Kinsella, B. Therese (2006) Molecular Characterisation of Promoter 1 of the Human Thromboxane A2 Receptor Gene. Conway Institute of Biomolecular and Biomedical Research Festival of Research, University College Dublin.  
Dr Dermot Leahy
Coss, A., Sheahan, K., Sullivan, S., Fox, E., Hyland, J., O'Donoghue, D., Leahy, D., Mulcahy, H., O'Sullivan, J. (2007) Gastroenterology 132: Suppl. 1, A-293 Amplification of Topoisomerase II? Occurs in Colorectal Cancer and Its Expression Is Associated with Aggressive Disease.  
Sheridan, J., Mulcahy, H., Fox, E., Leahy, D., Sheahan, K., Hyland, J., O’Donoghue, D., O’Sullivan, J. (2006) GUT 55: Suppl. 2, A85 Alterations in the levels of oxidative damage in sporadic colorectal cancer.  
Coss, A., Sheahan, K., Sullivan, S., Fox, E., O’Donoghue, D., Hyland, J., Leahy, D., Mulcahy, H., O’Sullivan, J. (2006) Modern Pathology 19: Suppl. 3, 57 Amplification of the topoisomerase IIa gene occurs in colorectal cancer and is associated with more aggressive disease.  
Sheridan, J., Wang, L.M., Fox, E., Leahy, D., Sheahan, K., Hyland, J., O’Donoghue, D., Mulcahy, H., O’Sullivan, J. (2006) Modern Pathology 19: Suppl. 3, 71 Higher levels of oxidative damage and tumor infiltrating lymphocytes in non-metastatic versus metastatic colorectal tumours.  
Professor Donal MacElroy
Ramamoorthy, A., R., Rahman, M., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P. (2007) Effect of process parameters on chemistry, growth rate and particle formation of atmospheric plasma deposited SiOx-siloxane coatings. Nanosmat2007 Conference, Portugal.  
McCann, M., Rahman, M., Mooney, D.A., Dowling, D., MacElroy, J.M.D. (2007) Growth of TiOx nano-films by PVD sputtering onto ceramic surfaces as a function of time for the preparation of high performance separation membranes. International Meeting on Developments in Materials, Processes and Applications of Nanotechnology, MPA-2007, Belfast, Northern Ireland.  
Ramamoorthy, A., R., Rahman, M., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P. (2006) Atmospheric pressure plasma deposition of SiOx coatings on Vycor glass. International Conference on Technological Advances of Thin Films & Surface Coatings, OFN 606, Singapore.  
Deshmukh, S.A., Mooney, D.A., MacElroy, J.M.D. (2006) Molecular modelling of thermo-responsive hydrogels. Macro-2006, Polymers for Advanced Technologies, Pune, India.  
Deshmukh, S.A., Mooney, D.A., MacElroy, J.M.D. (2006) Molecular simulation of pH sensitive hydrogels : structure generation, dynamics and solvent transport. Macro-2006, Polymers for Advanced Technologies, Pune, India.  
McDermott, T.C., Kozachok, M., Akter, T., MacElroy, J.M.D., Mooney, D.A (2006) Atomistic Simulation of the Formation of Nanoporous Silica Films Via Chemical Vapor Deposition. AIChE National Annual Meeting, San Francisco, USA.  
Dr Bryan Markey
Marques P.X., Williams E., O’Donovan J., Brady C., Sammin D., Bassett H., Markey B. and Nally J. (2007) Characterisation of the proteome of Chlamydophila abortus and antigens reactive with convalescent sheep serum Microbial Pathogenesis and Host Response, Cold Spring Harbor.  
Monahan A., Sekiya M., Brady C., Markey B., Mulcahy G. and Nally J. (2007) Proteomic analysis of sheep-specific Toxoplasma gondii tachyzoite antigens. Proceedings of the Joint Meeting of the British Society for Parasitology and Irish Society for Parasitology, Belfast.  
Leggett B., Abbott Y., Markey B. and Leonard F.C. (2006) Toxigenic Corynebacterium diphtheriae isolated from an equine wound. First Meeting of DipNet and Ninth International Meeting of the European Laboratory Working Group on Diphtheria.  
Leggett B., Abbott Y., Markey B. and Leonard F.C. (2006) Toxigenic Corynebacterium diphtheriae isolated from an equine wound. First meeting of DipNet and Ninth International Meeting of the European Laboratory Working Group on Diphtheriae, Athens.  
Markey B. (2006) Chlamydial infections of animals and ovine abortion. Proceedings of the Final Conference of COST 854, Protozoal reproduction losses in farm animals, Liege.  
Dr Amanda McCann
Brennan, D.J., Hewitt, S.M., Fox, E.J.P., O’Brien, S., Jirstrom, K., Duffy, M.J., Landberg, G., McCann, A., & Gallagher, W.M. (2006) Automated quantitative analysis of immunohistochemistry linked to clinical outcome, Dublin, Ireland.  
Dr Tara McMorrow
O’Connell S, McMorrow T, Ryan MP. (2006) Evidence for EMT in a CsA induced model of renal fibrosis. American Society of Nephrology.  
O’ Riordan A, McMorrow T, Johnston O, Gallagher W, Maguire P, Cagney G, Hegarty J, McCormick A, Watson AJ and Ryan MP. (2006) Using SELDI-TOF-MS Apo A1 is a serum biomarker of chronic kidney disease, post orthotopic liver transplantation. American Society of Nephrology.  
Johnston O, Conlon PJ, McMorrow T, O’Riordan A, Gallagher W, Maguire P, Wynne K, Cagney G, and Ryan MP. (2006) Urinary B2-microglobulin as a novel potential biomarker for chronic allograft nephropathy. American Society of Nephrology.  
Nolan S, Ryan MP, McMorrow T. (2006) Implications of increased expression of tissue transglutaminase in immune-mediated renal EMT. American Society of Nephrology.  
Dr James McRedmond
McRedmond J, Sewell L, Sullivan M, Edwards R, Cagney G. (2007) 'Protein Interaction Partners of Human 14-3-3 Protein Isoforms' Molecular and Cellular Proteomics.  
McRedmond J, O'Donoghue, N, Sullivan M, Cagney G. (2006) 'Protein movement during platelet activation revealed using shotgun proteomics of subcellular compartments' Molecular and Cellular Proteomics.  
Professor Wim Meijer
Miranda-CasoLuengo, R. and Meijer, W.G. (2007) A novel signal transduction system in mycolic acid-containing bacteria. International Symposium on the Biology of Actinomycetes, University of Newcastle, United Kingdom.  
Chen X, Yang J. and Meijer W.G. (2007) Identification of sensor kinase interacting with VirS encoded by the virulence plasmid of Rhodococcus equi. International Symposium on the Biology of Actinomycetes, University of Newcastle, United Kingdom.  
Finn, C.E., Chen, X. & Meijer, W.G. (2007) Protein networks of Rhodococcus equi. 160th Meeting of the Society for General Microbiology P MI 34.  
Fahey, R. and Meijer, W.G. 2007 (2007) An investigation into the extent and function of sigma factors in the genome of Rhodococcus equi. 160th Meeting of the Society for General Microbiology. P. PS 11.  
Finn, C., Chen, X. and Meijer, W.G. (2007) Virulence protein networks of Rhodococcus equi. International Symposium on the Biology of Actinomycetes, University of Newcastle, United Kingdom.  
Dr Keith J Murphy
O’Sullivan NC, McGettigan PA, Croydon L, Sheridan GK, Pickering M, Ring RH, von Schack D, Higgins DG, Regan CM, Murphy KJ (2007). Cell type- and region-specific regulation of nuclear factor kappa-B p65 activity in the hippocampus during consolidation of an avoidance conditioning task. Society for Neuroscience Annual Meeting 2007.  
Raghnaill, Nic, Monopoli MP, O’Sullivan NC, Loscher JS, Pennington S, Dunn MJ, Regan CM, Murphy KJ. (2007) Hippocampal protein expression changes associated with consolidation of spatial memory characterised using two dimensional electrophoresis. Society for Neuroscience Annual Meeting 2007.  
Sheridan G, Pickering M, Moynagh PN, O’Connor JJ, Murphy KJ. (2007) Temporal changes in nuclear factor kappa-B activity in distinct neuronal subpopulations of the rat hippocampus following spatial learning. Society for Neuroscience Annual Meeting 2007.  
Loscher JS, Pickering B, Pickering M, Murphy KJ. (2007) The nootropic nefiracetam prevents isoflurane-induced post-operative cognitive dysfunction (pocd) in aged wistar rats. Society for Neuroscience Annual Meeting 2007.  
O’Connor JJ, Watters O, Sheridan GK, Murphy KJ & Pickering M. (2007) TNFalpha-mediated modulation of glutamate excitotoxicity and ischemic preconditioning is time and sequence of TNFalpha and glutamate exposure-dependent. Society for Neuroscience Annual Meeting 2007.  
Connole L, O’Sullivan NC, Connellan J, Regan CM, Marquis KL, Menelas N. Pangalos MN, Bates B, von Schack D, Beyna M, Murphy KJ, Ring RH. (2007) Midkine is a learning-associated peptide with potent effects on hippocampal neurite outgrowth and synaptogenesis. Society for Neuroscience Annual Meeting 2007.  
Halley P, Connole LM, O’Sullivan NC, Loscher JS, Rombach N, Ford R, Ring RH, von Schack D, Pangalos MN, Regan CM, Murphy KJ. (2007) Alzheimer’s disease-associated proteins are regulated at a transcriptional level in the hippocampus during spatial memory consolidation. Society for Neuroscience Annual Meeting 2007.  
von Schack D, Connole L, Halley P, O’Sullivan NC, Li C, Rombach N, Hill AA, Ford R, Marquis KL, Brown EL, Pangalos MN, Regan CM, Ring RH, Murphy KJ. (2007) Characterization of temporal transcriptional programs accompanying memory consolidation in the hippocampus Society for Neuroscience Annual Meeting 2007.  
ter Horst JPF, Loscher JS, Regan CM, Murphy KJ. (2007) Expression of NCAM polysialylation in the rat prefrontal cortex in learning and disease. 8th IBRO congress.  
Monopoli MP, Pennington S, Dunn MJ, Murphy KJ. (2007) Use of two dimensional electrophoresis to characterise the hippocampal memory consolidation proteome. 8th IBRO congress.  
Professor Paul Murphy
Anquetin, Guillaume, Rawe, Sarah L., Murphy, Paul V. (2007) Synthesis and anticancer activity of new migrastatin analogs. 234th ACS National Meeting.  
Dr Philip Newsholme
Brennan L, Scullion, SM, Mion B, Hewage C, Malthouse JPG, Flatt P, Newsholme P and McClenaghan NH. (2007) Prolonged alanine exposure induces changes in metabolism Ca2+ handling and dsensitization of insulin secretion in clonal pancreatic beta cells. In: Diabetologia Vol 50 Spplement 1 eds. EASD 43rd Annual Meeting, S214 - S214.  
Keane D. and Newsholme P. (2007) Analysis of specific arachidonic acid induced changes in gene and protein expression in a clonal rat pancreatic beta cell line. In: Diabetologia Vol 50 Spplement 1 eds. EASD 43rd Annual Meeting, Amsterdam, Holland, S171 - S171.  
Kiely AM, Flatt PR and Newsholme P. (2007) Pro-inflammatory cytokines inhibit insulin secretion but increase glucose consumption, lactate production, triacylglycerol utilisation and AMPK activation in a clonal pancreatic beta cell line. In: Diabetologia Vol 50 Spplement 1 eds. EASD 43rd Annual meeting, Amsterdam, Holland, S229 - S229.  
Bender K, Maechler P and Newsholme P. (2007) The effect of over expression of the mitochondrial Aspartate-Glutamate exchanger Aralar 1 on insulin secretion and metabolism in the BRIN BD11 cell line. In: Diabetologia Vol 50 Spplement 1 eds. EASD 43rd Annual meeting, Amsterdam, Holland, S220 - S220.  
Dr Jens Erik Nielsen
Bjarnadottir, Una, Carstensen, Tommy, Nielsen, Jens Erik (2007) Detailed Analysis of the Dynamics of cAMP Dependent Protein Kinase using Molecular Dynamics Simulations and Normal Mode Analysis Proteins: From Birth to Death. 21st Annual Symposium of The Protein Society, July 21-25, 2007, Boston, MA, USA.  
Soendergaard, Chresten, McIntosh, Lawrence P., Pollastri, Gianluca, Nielsen, Jens (2007) Determination of electrostatic interaction energies and protonation state populations in enzyme active sites by global fits of NMR- titration data and pH-activity profiles Proteins: From Birth to Death 1st Annual Symposium of The Protein Society, July 21-25, 2007, Boston, MA, USA.  
Tynan-Connolly BM, Nogueira E, O’Meara F, Nielsen JE (2007) Modifying the pKa values in Hen Egg White Lysozyme using pKD and 1H-15N HSQC Spectroscopy. Proteins: From Birth to Death 21st Annual Symposium of The Protein Society, July 21-25, 2007, Boston, MA, USA.  
Bradley J, Salbo R, Nielsen JE. (2007) HEWL amyloidgenesis. Proteins: From Birth to Death 21st Annual Symposium of The Protein Society, July 21-25, 2007, Boston, MA, USA.  
Georgi N, Farrell D, O’Meara F, Webb H, Tynan-Connolly BM, Bjarnadottir U, Soendergaard C, Nielsen JE. (2007) Structural analysis of datasets from protein engineering studies using PEAT. Proteins: From Birth to Death 21st Annual Symposium of The Protein Society, July 21-25, 2007, Boston, MA, USA.  
Carstensen T, Nielsen JE. (2007) Prediction of residues important for protein dynamics. A normal mode analysis approach Frontiers of NMR in Molecular Biology, Snowbird, Utha, Jan 6-10, 2007.  
Tynan-Connolly B, Webb H, O'Meara F, McIntosh LP, Nielsen JE (2007) Altering The pKa Values Of HEWL using pKD and 1H-15N HSQC Spectroscopy. Keystones Conference: Frontiers of NMR in Molecular Biology. Keystones Conference, Snowbird Resort, Snowbird, Utah. Jan 6-10, 2007.  
Sondergaard CR, Pollastri G, Nielsen JE. (2006) Comparing machine learning and empirical methods for scoring of protein-ligand binding energies. The 16th European Symposium on Quantitative Structure-Activity Relationships & Molecular Modelling The Mediterranean Sea, 10th-17th September 2006.  
Dr John O'Connor
Sheridan, G.K., Pickering, M., Twomey, C., Moynagh, P.N., O'Connor, J.J., Murphy, K.J. (2006) GABA receptor blockade increases NF?b activation in neuroplastic cells of the rat dentate gyrus while decreasing its activity in more mature granule neurons. Irish journal of Medical Science, Volume 175(3) (electronic supplement 1), 78.  
Pickering, B.W., Pickering, M., O'Connor, J.J., Murphy, K.J. (2006) The anaesthetic agents propofol and isoflurane differentially effect glutamate-induced calcium influx in primary cultured neurones and glia. Irish journal of Medical Science, Volume 175(3) (electronic supplement 1), 40.  
Pickering, M., Pickering, B.W., Murphy, K.J., O'Connor, J.J. (2006) Discrimination of neurones and glia using calcium imaging in primary mixed cell culture models of glutamate excitotoxicity. Irish journal of Medical Science, Volume 175(3) (electronic supplement 1), 100.  
Cumiskey, D., O' Connor, J.J. (2006) The role of metabotropic glutamate receptors in the inhibitory effect of interleukin-18 on long-term potentiation. Irish journal of Medical Science, Volume 175(3) (electronic supplement 1), 53.  
Evers-Donnelly, A., O'Neill, C., O'Boyle, K., O'Connor, J.J. (2006) Modulation of dopamine release by cannabinoid receptor activation in rat striatal slices. Irish journal of Medical Science, Volume 175(3) (electronic supplement 1), p41.  
O'Neill C., Nolan B., O'Boyle K.M. and O'Connor J.J. (2006) SCH23390 attenuates A1 receptor-mediated inhibition of electrically evoked dopamine release from rat striatal slices. British Journal of Pharmacology. Vol 3, Issue 4, 067P.  
O'Leary D.M., Grennan G.Z., O'Connor J.J. and Herron C.E. (2006) The role of arachidonic acid signalling in mGluR mediated long term depression in the rat hippocampus. British Journal of Pharmacology, Vol 3, Issue 4, 152P.  
Sheridan G., Pickering M., Moynagh P.N., O'Connor J.J. and Murphy K.J. (2006) Tumour necrosis factor - selectively upregulates nuclear factor ?b expression in hippocampal sub-neuronal populations. British Journal of Pharmacology, Vol 3, Issue 4, 113P.  
Cumiskey, D., O' Connor, J.J. (2006) A role for mGluRs and Ca2+ in the inhibitory effect of tumour necrosis factor-a on long-term potentiation. British Journal of Pharmacology. Vol 3, Issue 4, 055P.  
Dr William O'Connor
O'Connor, W.J. (2007) Control of flexible mechanical systems: wave-based techniques. ACC 2007.  
O'Connor, W.J. (2006) Wave-based control of flexible mechanical systems. International Conference on Informatics in Control, Automation and Robotics (ICINCO 2006), Setúbal, Portugal, 27 - 32.  
O’Connor, W.J., Ramos, F. (2006) Wave-based control of a non-linear flexible systems. ESDA 2006, 8th Biennial ASME Conference on Engineering Systems Design and Analysis, Turin, Italy.  
Yang, TW, O’Connor, W.J. (2006) Wave Based Robust Control of a Crane System. IROS 2006: International Conference on Intelligent Robots and Systems, Beijing, China.  
Dr Donal O'Shea
O'Shea, D.F. (2007) New Light Activated Anti-cancer Agents. Central European Society for Anticancer Drug Research Meeting, Frankfurt, Germany.  
O'Shea, D.F. (2007) Directed Stilbene Lithiation. 8th International Symposium on Carbanion Chemistry, Madison, WI, USA.  
Dr Cosima Stubenrauch
Tessendorf, R, Stubenrauch, C., Lynch, I., Dawson, K., Strey, R. (2007) Microemulsions as Templates for New Materials. Ostwald Kolloquium.  
Catanoiu, G., Stubenrauch, C., Blunk, D. (2007) Liquid crystalline amphiphilic phosphine oxide metal complexes. 35. Arbeitstagung Flüssigkristalle.  
Stubenrauch, C. (2006) Factors that determine the Stability of Foam and Emulsion Films: Disjoining Pressure and Interfacial Rheology World Congress of Emulsions.  
Dr Torres Sweeney
Pannier, L., Sweeney, T., Stapleton, P., Hamill R. and Mullen, A.M. (2007) Assessment of single nucleotide polymorphisms (SNPs) in the bovine leptin gene in association with intramuscular fat (IMF) in beef cattle European Association for Animal Production, Dublin.  
Pannier, L., Stapleton, P., Mullen, A.M., Hamill, R. and Sweeney, T. (2007) Assessment of single nucleotide polymorphisms (SNPs) in genes on bovine chromosome 14 in association with intramuscular fat (IMF) in beef. European Association for Animal Production, Dublin.  
Aslan, O., Sweeney, T., Mullen, A.M. and Hamill, R. (2007) Genotype frequencies of a non-synonymous polymorphism at exon 9 of the calpain I gene vary among breeds sampled from the Irish herd. European Association for Animal Production.  
Sweeney, T., Aslan, O., Bahar, B., Pannier, L. Mullen, A.M. and Hamill, R.M. (2007) Genetic variation and selection for superior meat quality traits in cattle breeds under sustainable animal production systems European Association for Animal Production.  

Boland, T.M., Hayes, L., Murphy, J.J., Sweeney, T. and Crosby, T.F. (2007) Dietary iodine and cobalt supplementation of the pregnant ewe reduces nutrient uptake from the colostrum by the new born lamb. Americal Society for Animal Science.

 
McGettrick, S.A., Moloney, A.P., Monahan, F.J., Sweeney, T., Mulligan, F.J. (2007) Delta 9 desaturase gene expression in muscle, adipose tissue and liver of beef heifers following supplementation of grass with a concentrate containing sunflower seed and fish oil. American Association for Animal Science.  
Bahar B. and Sweeney, T. (2007) Diversity of single nucleotide polymorphisms (SNPs) in the promoter region of the bovine Neuropeptide Y (NPY) gene. European Association for Animal Production.  
Pannier, L., Stapleton, P., Sweeney, T. and Mullen, A.M. (2006) Analysis of bovine muscle DNA polymorphisms and their association with meat quality, in particular intramuscular fat, in the Irish cattle population. 30th International Conference on Animal Genetics.  
Pannier L, Stapleton P, Sweeney T. and Mullen (2006) Relationship between a DNA polymorhism in the bovine thyroglobulin gene and intramuscular fat values in the Irish Cattle population Proceedings, BioNet Annual Conference, The Biotechnology Showcase 2006, Dublin, 13.  
Pannier, L., Stapleton, P., Sweeney, T. & Mullen, A.M (2006) Analysis of bovine muscle DNA polymorphisms and their association with meat quality, in particular intramuscular fat, in the Irish cattle population. International Society for Animal Genetics.  
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