'Cog fabricated by Focused Ion Beam Nanolithography'. Image by Dr Ian Reid.
UCD School of Chemical & Bioprocess Engineering - Research Publications 2008/09
Below is the list of research publications for the UCD School of Chemical & Bioprocess Engineering in the academic year 2008/09
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| Professor Mohamed Al-Rubeai | |
| Browne S. M. and Al-Rubeai M. (2009) 'Selection Methods for High-Producing Mammalian Cell Lines' In: Cell Engineering: Cell Line development. Berlin: Springer. | |
Melero-Martin J. M., Santhalingam S., Al-Rubeai M. (2009) 'Methodology for optimal in vitro cell expansion in tissue engineering' In: Bioreactor Systems for Tissue Engineering. Berlin: Springer-Verlag.  |
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| Dr Cosima Stubenrauch | |
| O. Rojas, C. Stubenrauch, L. Lucia, Y. Habibi (2009) 'Chapter 16: Interfacial Properties of Sugar-Based Surfactants' In: D. Hayes, D. Kitamoto D. Solaiman, R. Ashby (eds). Biobased Surfactants and Detergents: Synthesis, Properties, and Applications. Urbana: AOCS Press. | |
| C. Stubenrauch and T. Sottmann (2009) 'Chapter 12: Microemulsions stabilized by Sugar Surfactants' In: Ruiz, C.C (eds). Sugar-Based Surfactants: Fundamentals and Applications. Boca Raton: Taylor & Francis. | |
| P. Claesson, C. Stubenrauch, R. Krustev, I. Johansson (2009) 'Chapter 4: Thin Film and Foam Properties of Sugar-Based Surfactants' In: Ruiz, C.C (eds). Sugar-Based Surfactants: Fundamentals and Applications. Boca Raton: Taylor & Francis. | |
| C. Stubenrauch and R. Strey (2009) 'Chapter 11: Future Challenges' In: Stubenrauch, C (eds). Microemulsions: Background, New Concepts, Applications, Perspectives. Oxford: Wiley-Blackwell. | |
| T. Sottmann and C. Stubenrauch (2009) 'Chapter 1: Phase Behavior, Interfacial Tension, and Microstructure of Microemulsions' In: Stubenrauch, C (eds). Microemulsions: Background, New Concepts, Applications, Perspectives. Oxford: Wiley-Blackwell. | |
| Professor Mohamed Al-Rubeai | |
| M. Al-Rubeai (Ed.). (2009) Cell Engineering Vol. 6: Cell Line Development. Springer. | |
| Dr Cosima Stubenrauch | |
| C. Stubenrauch (Ed.). (2009) Microemulsions - Background, New Concepts, Publications, Perspectives. Oxford: Wiley-Blackwell. | |
| Professor Mohamed Al-Rubeai | |
| Kuystermans D. and Al-Rubeai M. (2009) 'cMyc increases cell number through uncoupling of cell division from cell size in CHO cells'. BMC Biotechnology, 9 . |
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| Woolley J. F. and Al-Rubeai M (2009) 'The isolation and identification of a secreted biomarker associated with cell stress in serum-free CHO cell culture. Biotechnology and Bioengineering'. Biotechnology and Bioengineering, 104 :590-600. | |
| Boehm D., Murphy W. G. and Al-Rubeai M (2009) 'The potential of human peripheral blood derived CD34+ cells for ex vivo red blood cell production'. Journal of Biotechnology . | |
| Sandhu K. S. and Al-Rubeai M. (2009) 'The effect of Bcl-2, YAMA, and XIAP over-expression on apoptosis and adenovirus production in HEK293 cell line'. Biotechnology and Bioengineering, 104 :752-765. | |
| Woolley J. F. and Al-Rubeai M (2009) 'The application of SELDI-TOF mass spectrometry to mammalian cell culture'. Biotechnology Advances, 104 :590-600. | |
| Khoo S. H. G. and Al-Rubeai M. (2009) 'Metabolic characterization of a hyper-productive state in an antibody producing NS0 myeloma cell line'. Metabolic Engineering, 11 :199-211. | |
| Khoo S. H. G. and Al-Rubeai M. (2009) 'Detailed understanding of enhanced specific antibody productivity in NS0 myeloma cells'. Biotechnology and Bioengineering, 102 :188-199. | |
| Dr Eoin Casey | |
| Cotter, J.J., O'Gara, J. P. and E. Casey (2009) 'Rapid depletion of dissolved oxygen in 96 well microtitre plate Staphylococcus epidermidis0 biofilm assays promotes biofilm development and is influenced by inoculum cell concentration'. Biotechnology and Bioengineering, 103 (5):1042-1047. |
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| Heffernan, B., Murphy, C., Syron, E. and Casey, E. (2009) 'Treatment of fluoroacetate by a Pseudomonas fluorescens biofilm grown in a membrane aerated biofilm reactor'. Environmental Science and Technology . |
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| Syron, E., Kelly, H., Casey, E. (2009) 'Studies on the effect of concentration of a self-inhibitory substrate on biofilm reaction rate under co-diffusion and counter diffusion configurations'. Journal of Membrane Science, 335 (1):76-82. |
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| Heffernan,B ., Murphy, C. and Casey, E. (2009) 'Comparative performance of planktonic and biofilm cultures of Pseudomonas fluorescens DSM 8341 grown on fluoroacetate'. Applied and Environmental Microbiology, 75 (9):2899-2907. |
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| Dr Niall J English | |
| N.J. English and G.M. Phelan (2009) 'Molecular dynamics study of thermal-driven methane hydrate dissociation'. Journal of Chemical Physics, 131 (7). | |
| R. Long and N.J. English (2009) 'Band gap engineering of (N, Ta)-codoped TiO2: A first-principles calculation'. Chemical Physics Letters, 478 (4-6):175-179. | |
| N.J. English and D.A. Mooney (2009) 'Very different responses to electromagnetic fields in binary ionic liquid-water solutions'. Journal of Physical Chemistry B, 113 (30):10128-10134. | |
| N.J. English and J.S. Tse (2009) 'Mechanisms for thermal conduction in methane hydrate'. Physical Review Letters, 103 (1). | |
| N.J. English, G.Y. Solomentsev and P. O¿Brien (2009) 'Non-equilibrium molecular dynamics study of electric and low-frequency microwave fields on hen egg white lysozyme'. Journal of Chemical Physics, 131 (3). | |
| R. Long and N.J. English (2009) 'Energetic and electronic properties of P doping at the rutile TiO2 (110) surface from first-principles'. Journal of Physical Chemistry, 113 (21):9423-9430. | |
| R. Long and N.J. English (2009) 'Synergistic Effects of Bi/S Co-doping on Visible Light-Activated Anatase TiO2 Photocatalysts from First-Principles'. Journal of Physical Chemistry, 113 (19):8373-8377. | |
| R. Long and N.J. English (2009) 'First-principles calculation of nitrogen-tungsten codoping effects on the band structure of anatase-titania'. Applied Physics Letters, 94 (13). | |
| J.-A. Garate, N.J. English and J.M.D. MacElroy (2009) 'Carbon nanotube assisted water self-diffusion across lipid membranes in the absence and presence of electric fields'. Molecular Simulation, 35 (1-2):3-12. | |
| Professor Donal MacElroy | |
| Ramamoorthy, A., R., Rahman, M., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P. (2009) 'Effect of process parameters on chemistry, growth rate and particle formation of atmospheric plasma deposited SiOx - siloxane coatings'. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, 9 :3506-3513. | |
| Dowling, D.P., Ramamoorthy, A., R., Rahman, M., Mooney, D.A., MacElroy, J.M.D. (2009) 'Influence of atmospheric plasma source and gas composition on the properties of deposited siloxane coatings'. Plasma Process and Polymers, 6 (S1):S483-S489. | |
| Ramamoorthy, A., R., Rahman, M., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P. (2009) 'Ramamoorthy, A., R., Rahman, M., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P., ¿The influence of process parameters on chemistry, roughness and morphology of siloxane films deposited by an atmospheric plasma jet system¿, 6'. Plasma Process and Polymers, 6 (S1):S530-S536. | |
| Deshmukh, S., Mooney, D.A., McDermott, T.C., Kulkarni, S., MacElroy, J.M.D. (2009) 'Molecular Modeling of Thermo-responsive Hydrogels: Observation of Lower Critical Solution Temperature'. Soft Matter, 5 :1514-1521. | |
| Garate, J.-A., English, N.J., MacElroy, J.M.D. (2009) 'Carbon nanotube assisted water self-diffusion across lipid membranes in the absence and presence of electric fields'. Molecular Simulation, 35 :3-12. | |
| Dr Damian Mooney | |
| English, N.J. and Mooney, D.A. (2009) 'Very Different Responses to Electromagnetic Fields in Binary Ionic Liquid-Water Solutions'. Journal of Physical Chemistry B, 113 (30):10128-10134. | |
| Rahman M., Amsarani, R., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P. (2009) 'AP Plasma CVD The Influence of Process Parameters on Chemistry, Roughness and Morphology of Siloxane Films Deposited by an Atmospheric Plasma Jet System'. Plasma Process and Polymers, 6 (0):S530-S536. | |
| Rahman M., Amsarani, R., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P. (2009) 'AP Plasma CVD Influence of Atmospheric Plasma Source and Gas Composition on the Properties of Deposited Siloxane Coatings'. Plasma Process and Polymers, 6 (0):S483-S489. | |
| Rahman M., Amsarani, R., Mooney, D.A., MacElroy, J.M.D., Dowling, D.P. (2009) 'Effect of Process Parameters on Chemistry, Growth Rate and Nano-Sized Particulate Formation of Atmospheric Plasma Deposited, nm Thick Siloxane Coatings'. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, 9 (6):3506-3513. | |
| Deshmukh, S, Mooney, D.A., McDermott, T., Kulkarni, S., MacElroy, J.M.D. (2009) 'Molecular modeling of thermo-responsive hydrogels: observation of lower critical solution temperature'. Soft Matter, 5 (7):1514-1521. | |
| Dr Ian Reid | |
| A. DeMasi, L.F.J. Piper, Y. Zhang, I. Reid, S. Wang, K.E. Smith, J.E. Downes, N. Peltekis, C. McGuinness and A. Matsuura (2008) 'Electronic Structure of the Organic Semiconductor Alq3 (aluminum tris-8-hydroxyquinoline) from Soft X-ray Spectroscopies and Density Functional Theory Calculations'. Journal of Materials Chemistry, 129 (22). |
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| I. Reid, Y. Zhang, A. DeMasi, G. Hughes and K. E. Smith. (2008) 'Electronic structure characterization of Ultra Low-k (ULK) Carbon Doped Oxide (CDO) using soft X-ray emission spectroscopy'. Thin Solid Films, 516 (1). |
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| Dr Cosima Stubenrauch | |
| M. Magno, R. Tessendorf, B. Medronho, M. da Graça Martins Miguel, C. Stubenrauch (2009) 'Gelled Polymerizable Microemulsions. 3. Rheology'. Soft Matter, 5 (4763). | |
| A. van der Net, A. Gryson, M. Ranft, F. Elias, C. Stubenrauch, W. Drenckhan (2009) 'Highly Structured Porous Solids from Liquid Foam Templates'. Colloids and Surfaces A, 346 (5). | |
| C. Stubenrauch, T. Sottmann, R. Strey, I. Lynch (2009) 'Comment on Gelation of microemulsions and release behavior of sodium salicylate from gelled microemulsions, Eur. J. Pharm. Biopharm., 2009, 710 , 297'. European Journal of Pharmaceutics and Biopharmaceutics, 72 (632). | |
| D. Blunk, N. Bongartz, C. Stubenrauch, V. Gärtner (2009) 'Synthesis, Amphitropic Liquid Crystallinity, and Surface Activity of New Inositol-Based Amphiphiles'. Langmuir, 25 (7872). | |
| C. Stubenrauch, L.K. Shrestha, D. Varade, I. Johansson, G. Olanya, K. Aramaki, P. Claesson (2009) 'Aqueous Foams stabilized by n0 -Dodecyl-b-D-Maltoside, Hexaethyleneglycol MonododecylEther, and their 1:1 Mixture'. Soft Matter, 5 (3070). | |
| E. Carey, C. Stubenrauch (2009) 'Properties of Aqueous Foams stabilized by Dodecyltrimethylammonium Bromide'. Journal of Colloid and Interface Science, 333 (619). | |
| F. Kleinschmidt, C. Stubenrauch, J. Delacotte, R. von Klitzing, D. Langevin (2009) 'On the Stratification of Foam Films containing Polyelectrolytes. Influence of the Polymer Backbone¿s Rigidity'. Journal of Physical Chemistry B, 113 (3972). | |
| R. Najjar, C. Stubenrauch (2009) 'Phase Diagrams of Microemulsions containing Reducing Agents and Metal Salts as Bases for the Synthesis of Metallic Nanoparticles'. Journal of Colloid and Interface Science, 331 (214). | |
| N. Anjum, M.-A. Guedeau-Boudeville, C. Stubenrauch, A. Mourchid (2009) 'Phase Behavior and Microstructure of Microemulsions Containing the Hydrophobic Ionic Liquid bmimPF6'. Journal of Physical Chemistry B, 113 (239). | |
| R. Tessendorf, R. Strey, C. Stubenrauch (2008) 'Microemulsions with Alkyldimethyl Phosphine Oxides and Alkyldiethyl Phosphine Oxides'. Langmuir, 24 (11390). | |
| Professor Mohamed Al-Rubeai | |
| Boehm D., Murphy W. G. and Al-Rubeai M. (2009) The effect of cell crowdedness on ex vivo erythropoiesis of peripheral blood derived CD34+ cells Human pluripotent stem cells symposium, Dublin, | |
| Al-Rubeai M. (2009) Life, stress and death in the bioreactor Cell Line Development and Engineering, | |
| Boehm D., Murphy W. G. and Al-Rubeai M. (2009) The Influence of the microenvironment on cell expansion, maturation and viability in ex vivo erythropoiesis of peripheral blood derived CD34+ cells 19th European Society for Animal Cell Culture (ESACT-UK) Annual Meeting, Hinxton, | |
| Krampe, B. and Al-Rubeai, M. (2009) The Influence of the microenvironment on cell expansion, maturation and viability in ex vivo erythropoiesis of peripheral blood derived CD34+ cells 19th European Society for Animal Cell Culture (ESACT-UK) Annual Meeting, Hinxton, | |
| Al-Rubeai M. (2008) Cell engineering strategy to improve stability, adaptation and growth of cell lines for bioproduction IV National Congress of Bioengineering, Izmir, Turkey, | |
| Boehm D., Murphy W., Al-Rubeai M. (2008) Ex-vivo production of human red blood cells from peripheral blood derived CD34+ cells Stem Cells Europe, | |
| Krampe B. and Al-Rubeai M. (2008) Transcriptome analysis of antibody producing NS0 cells in chemostat and perfusion cultures 7th European Symposium on Biochemical Engineering Science (ESBES7), | |
| Dr Eoin Casey | |
| Katarzyna Misiak, Eoin Casey, Cormac Murphy (2008) Biodegradation of fluorobenzoate using a Pseudomonas sp. B13 biofilm Society for General Microbiology 163rd Meeting, | |
| Dr Niall J English | |
| N.J. English (2009) Molecular Simulation Studies of Materials for Solar Energy Applications World Congress of Chemical Engineering, Montreal, | |
| N.J. English (2009) Remote teaching of molecular simulation courses by videoconferencing and online delivery American Chemical Society Autumn meeting, Washington, D.C, | |
| R. Long and N.J. English (2009) Density Functional Theory Studies of Doping in Both Bulk- and Surface-State Titania American Chemical Society Autumn Meeting, Washington, D.C, | |
| N.J. English, G.Y. Solomentsev and P. O'Brien (2009) Non-Equilibrium MD Study of Electric and Low-Frequency Microwave Fields on Hen Egg White Lysozyme American Chemical Society Autumn Meeting, Washington, D.C, | |
| N.J. English (2009) The role of audiovisual technology in remote engineering/science education: case study of videoconferencing and online delivery European Society for Engineering Education (SEFI) Annual Meeting, Rotterdam, | |
| R. Long and N.J. English (2009) Density functional theory description of the mechanism of ferromagnetism in boron-doped SnO2 International Conference on Magnetism 2009, Karlsruhe, | |
| N.J. English and D.A. Mooney (2009) Molecular Simulation Studies of E/m Field Effects on Neat Ionic Liquids ACAM-CECAM Meeting on Molecular Simulation of Ionic Liquids, Univ. College Dublin, | |
| N.J. English and D.A. Mooney (2009) Molecular Simulation Studies of E/m Field Effects on Ionic Liquid-Water Mixtures ACAM-CECAM Meeting on Molecular Simulation of Ionic Liquids, Univ. College Dublin, | |
| J.A. Garate, N.J. English and J.M.D. MacElroy (2008) ¿ Carbon Nanotube Assisted Water Self-Diffusion Across Lipid Membranes in the Absence and Presence of Electric and Electromagnetic Fields American Institute of Chemical Engineers Annual Meeting, Philadelphia, | |
| Professor Brian Glennon | |
| Mairtin McNamara & Brian Glennon (2009) Eliminating micronisation using fine particle crystallization 16th International Process Development Conference, | |
| Brian Rice & Brian Glennon (2009) Use of ReactIR and FBRM for monitoring animal cell culture processes 16th International Process Development Conference, | |
| Mark Barrett & Brian Glennon (2009) The optimization and scale-up of anti-solvent addition crystallization from lab to pilot plant 16th International Process Development Conference, | |
| Dr Patricia Mary Kieran | |
| Kieran, PM & O'Neill, G (2009) Introducing Peer-Assisted Learning to a Chemical Engineering Curriculum Students learning from students - from theory to practice, KU Leuven, Belgium, | |
| Hennessy E., Hernández R., Kieran P.M.& McLoughlin H. (2008) Students' Motivation for Module Choices in an Irish University SRHE Annual Conference 2008: Valuing Higher Education, | |
| Dr Maria Raytchinova Kosseva | |
| Kosseva M.R. (2009) Recovery of valuable chemicals from thermophilic biomass BIOENERGY II, Brazil, Rio de Janeiro, | |
| Professor Donal MacElroy | |
| Deshmukh, S., Landowski, M., Mooney, D.A., MacElroy, J.M.D. (2008) Hydrogel Behaviour: A Molecular Simulation Study of Poly(N-isopropyl acrylamide) AIChE National Annual Meeting, Philadelphia, Pennsylvania, | |
| Akter, T., McDermott, T.C., MacElroy, J.M.D., Mooney, D.A. (2008) Molecular Simulation of the Formation of Ultrathin Silica Films from TEOS (tetraethoxysilane) using Kinetic Monte Carlo AIChE National Annual Meeting, Philadelphia, Pennsylvania, | |
| McCann, M, Ramamoorthy, A., Rahman, M., Mooney, D.A., Dowling, D.P., and MacElroy, J.M.D. (2008) Microporous Silica Coatings on Mesoporous SiO2 and ZrO2 Supports: Membranes for High Temperature Gas Separation Applications AIChE National Annual Meeting, Philadelphia, Pennsylvania, | |
| MacElroy, J.M.D., Garate, J.-A., English, N.J. (2008) The Influence of Electric and Electromagnetic Fields on Water Self-diffusion within Carbon Nanotubes Implanted in Lipid Membranes AIChE National Annual Meeting, Philadelphia, Pennsylvania, | |
| D. P. Dowling, R. Amsarani, M. Rahman, D. A. Mooney and J. M. D. MacElroy (2008) Influence of gas composition on particulate generation during the deposition of siloxane films using atmospheric pressure plasmas 11th International Conference on Plasma Surface Engineering (PSE), Garmisch-Partenkirchen, Germany, | |
| R. Amsarani, M. McCann, M. Rahman, D. A. Mooney, J. M. D. MacElroy and D. P. Dowling (2008) Preparation, properties and gas permeability of silica membranes deposited by plasma jet system 11th International Conference on Plasma Surface Engineering (PSE), Garmisch-Partenkirchen, Germany, | |
| Dr Susan McDonnell | |
| Ryle JP, Moloney KM, McDonnell S, Naughton TJ and JT Sheridan (2009) Multispectral lensless digital holographic microscrope: imaging MCF-7 and MDA-MB-231 cancer cell cultures Proceeding of SPIE, Optics and Photonics for Information Processing III, Volume 7442 - 744206 | |
| Ryle JP, Monaghan DS, McDonnell S and JT Sheridan (2009) Real world objects: capturing using in-line digital holography projecting using spatial light modulators Proceeding of SPIE, Optics and Photonics for Information Processing III, Volume 7442, 744 | |
| Germano S, Kennedy S, Hughes L, McDonnell S, Mehta JP, Doolan P, Clynes M, O'Driscoll LO (2009) Characterisation of neuronal calcium sensor-1 (NCS-1) as a novel prognostic biomarker wit potential therapeutic implications for triple negative breast cancer . In: Annals of Oncology eds. IMPAKT Breast Cancer Conference, 49 - 50 | |
| Malone, C., McGee, S., Hughes, L., Gallagher, W.M., and S. McDonnell (2008) Effect of PLAC8 knockdown in breast cancer cell line growth 4th All Ireland Cancer Conference, Dublin, December, 2008, | |
| Dr Cosima Stubenrauch | |
| D. Blunk, C. Stubenrauch (2009) New surface active inositol derivatives 44th International wfk Detergency Conference, | |
