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UCD Complex and Adaptive Systems Laboratory

'Collective search behaviour in chaotic flows	'. Image by Colin Torney.

'Collective search behaviour in chaotic flows '. Image by Colin Torney.

UCD Complex and Adaptive Systems Laboratory - Research Publications 2008/09

Below is the list of research publications for the UCD Complex and Adaptive Systems Laboratory in the academic year 2008/09




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Books
Professor Anthony Brabazon
Dempsey, I., O'Neill, M. and Brabazon, A. (2009) Foundations in Grammatical Evolution for Dynamic Environments. Berlin: Springer. Available Online  
Dr Michael O'Neill
Dempsey, I., O'Neill, M., Brabazon, A. (2009) Foundations in Grammatical Evolution for Dynamic Environments. Berlin/Heidelberg: Springer.  
Dr Emil Vassev
Emil Vassev (2009) General Architecture for Demand Migration in Distributed Systems. Germany: LAP Lambert Academic Publishing. Available Online  
Emil Iordanov Vassev (2008) Towards a Framework for Specification and Code Generation of Autonomic Systems. Montreal, Canada: Concordia University, Montreal, Canada.  
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Book Chapters
Professor Petra Ahrweiler
Andreas Pyka, Petra Ahrweiler and Nigel Gilbert (2009) 'Agent-based Modelling of Innovation Networks: The Fairytale of Spillovers. ' In: Andreas Pyka and Andrea Scharnhorst (eds). Innovation Networks. New Approaches in Modeling and Analyzing. Berlin/New York: Springer.  
Petra Ahrweiler and Nigel Gilbert (2009) 'Evaluating Simulation: Abstract social Processes or history-friendly Models?' In: Flaminio Squazzoni (eds). Epistemological Aspects of Computer Simulation in the Social Sciences. Berlin/New York: Springer.  
Professor Christopher Bean
Vassalli, M., Longo, A., Montagna, C.P., O'Brien, G.S., Bean, C.J., Bisconti, L., Papale, P. and Saccorotti, G. (2009) 'An integrated method to model volcanic processes and associated geophysical signals' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Bean, C.J., Lokmer, I. and O'Brien, G.S. (2009) 'Moment tensor inversion of Long Period signals: The effect of near surface velocity structure' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
O'Brien, G.S. and Bean, C.J. (2009) 'Gas slug ascent in irregular volcanic conduits: Implications for recorded seismicity' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
O'Brien, G.S., Lokmer, I., Stich, D. and Bean, C.J. (2009) 'Time reverse location and source radiation determination of synthetic volcanic tremor' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Martini, F., Bean, C.J. and Pandolfi, D. (2009) 'Using coda wave interferometry to detect velocity changes in volcanic environments: Application to Mt Vesuvius, Mt Etna, Fogo and Deception Island' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Lokmer, I. and Bean, C.J. (2009) 'Characteristics of the near-field seismic observations in volcanic environments' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Professor Anthony Brabazon
Schyuan, W. and Brabazon, A. (2009) 'The Emergence of a Market: What Efforts can Entrepreneurs Make?' In: Natural Computing in Computational Finance (Volume II). Germany: Springer. Available Online  
Bradley, R., Brabazon, A. and O'Neill, M. (2009) 'A Neuro-evolutionary Approach for Interest Rate Modelling' In: Natural Computing in Computational Finance (Volume II). Germany: Springer. Available Online  
Dr Eimear Byrne
E. Byrne, T. Mora (2009) 'Groebner bases over commutative rings with applications to coding theory' In: Sala, Mora, Perret, Sakata, Traverso (eds). Gröbner Bases, Coding, and Cryptography. RISC Series: Springer.  
Professor Pádraig Cunningham
Foley, R., DiFranco, M., Bryan, K., Rexhepaj, E., Mulrane, L., Watson, W., Cunningham, P. and Gallagher, W. (2008) 'Automated Image Analysis Approaches in Histopathology' In: Handbook of Research on Systems Biology Applications in Medicine. Hershey, Pennsylvania: IGI Global.  
Dr Simon Andrew Dobson
Kieran Delaney and Simon Dobson (2008) 'Augmenting materials to build cooperating objects' In: Kieran Delaney (eds). Ambient intelligence with microsystems: augmented materials and smart objects. New York: Springer Verlag.  
Juan Ye and Simon Dobson and Paddy Nixon (2008) 'An overview of pervasive computing systems' In: Kieran Delaney (eds). Ambient intelligence with microsystems: augmented materials and smart objects. New York: Springer Verlag.  
Simon Dobson (2008) 'Co-design for context awareness in pervasive systems' In: Kieran Delaney (eds). Ambient intelligence with microsystems: augmented materials and smart objects. New York: Springer Verlag.  
Professor Joao Marques-Silva
J. Marques-Silva (2009) 'Boolean Satisfiability and EDA Applications' In: Cambridge University Press.  
J. Marques-Silva and I. Lynce and S. Malik (2009) 'Conflict-Driven Clause Learning SAT Solvers' In: IOS Press.  
Dr Gareth Shane O'Brien
Vassalli, M., Longo, A., Montagna, C.P., O'Brien, G.S., Bean, C.J., Bisconti, L., Papale, P. and Saccorotti, G. (2009) 'An integrated method to model volcanic processes and associated geophysical signals' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
O'Brien, G.S., Lokmer, I., Stich, D. and Bean, C.J. (2009) 'Time reverse location and source radiation determination of synthetic volcanic tremor' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Project Consortium/Jaycee Printing. Available Online  
Monteiller, V., Métaxian, J-P., Macedo, O., O'Brien, G.S., Lokmer, I. and Taipe, E. (2009) 'Moment-tensor inversion of Very Long Period explosion events recorded on the Ubinas volcano, Peru' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Bean, C., Lokmer, I. and O'Brien, G.S. (2009) 'Moment tensor inversion of Long period signals: The effect of near surface velocity structure' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
O'Brien, G.S. and Bean, C.J. (2009) 'Gas slug ascent in irregular volcanic conduits: Implications for recorded seismicity' In: Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (eds). VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Dr Michael O'Neill
Bradley, R., Brabazon, A., O'Neill, M. (2009) 'A Neuro-evolutionary Approach for Interest Rate Modelling' In: Natural Computing in Computational Finance (Volume 2). Heidleberg: Springer.  
Brabazon A., O'Neill M. (2009) 'Natural Computing in Computational Finance (Volume 2): Introduction' In: Natural Computing in Computational Finance (Volume 2). Heidleberg: Springer.  
Dr Aaron Quigley
Clear A.K., Shannon R., Holland T., Quigley A., Dobson S., and Nixon P., (2009) 'Situvis: A Visual Tool for Modeling a User's Behaviour Patterns in a Pervasive Environment' In: Tokuda, H.; Beigl, M.; Friday, A.; Brush, A.J.B.; Tobe, Y (eds). Pervasive Computing. Nara, Japan: Springer-Verlang. Available Online  
Cutting A and Quigley A (2009) 'Serendipity reloaded: fair loading in event-based messaging' In: Annika Hinze and Alejandro Buchmann (eds). Handbook of Research on Advanced Distributed Event-Based Systems, Publish/Subscribe and Message Filtering Technologies. USA: IGI Global.  
Quigley A and Bodea F. (2009) 'Face to face collaborative interfaces' In: Hamid Aghajan, Stanford University, USA, Juan Carlos Augusto, University of Ulster, UK and Ramon Delgado, University of Granada, Spain (eds). Human Centric Interfaces for Ambient Intelligence. Netherlands: Elsevier. Available Online  
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Books Edited
Professor Christopher Bean
Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (Ed.). (2009) VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Professor Anthony Brabazon
Brabazon, A. and O'Neill, M (Ed.). (2009) Natural Computing in Computational Finance (Volume II). Germany: Springer.  
Giacobini, M. Brabazon, A. et al (Ed.). (2009) Applications of Evolutionary Computing, Lecture Notes in Computer Science 5484. Berlin: Springer. Available Online  
Dr Gareth Shane O'Brien
Bean, C.J., Braiden, A.K., Lokmer, I., Martini, F. and O'Brien, G.S (Ed.). (2009) VOLUME: VOLcanoes, Understanding subsurface mass moveMEnt. Dublin: VOLUME Consortium/Jaycee Printing. Available Online  
Dr Michael O'Neill
Raidl G., Rothlauf R., Squillero G., Drechsler R., Stuetzle T., Birattari M., Congdon C.B., Middendorf M., Blum C., Cotta C., Bosman P., Grahl J., Knowles J., Corne D., Beyer H-G., Stanley K., Miller J.F., van Hemert J., Lenaerts T., Ebner M., Bacardit J., O'Neill M., Di Penta M., Doerr B., Jansen T., Poli R., Alba E (Ed.). (2009) GECCO '09: Proceedings of the 11th Annual conference on Genetic and evolutionary computation. ACM.  
Giacobini, M., Brabazon, A., Cagnoni, S., Di Caro, G.A., Ekart, A., Esparcia-Alcazar, A.I., Farooq, M., Fink, A., Machado, P., McCormack, J., O'Neill, M., Neri, F., Preus, M., Rothlauf, F., Tarantino, E., Yang, S (Ed.). (2009) Applications of Evolutionary Computing. Berlin/Heidelberg: Springer.  
Brabazon, A., O'Neill, M (Ed.). (2009) Natural Computing in Computational Finance (Volume 2). Berlin/Heidelberg: Springer.  
Dr Aaron Quigley
Quigley A., Subramanian S. and Izadi S (Ed.). (2009) Journal of Personal and Ubiquitous Computing. Springer Verlag.  
Choudhury, T.; Quigley, A.; Strang, Th.; Suginuma, K (Ed.). (2009) Proceedings on the 4th International Symposium on Location and Context Awareness, Vol. 5561. Tokyo, Japan: Springer-Verlang. Available Online  
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Peer Reviewed Journals
Professor Christopher Bean
O'Brien, G.S., Bean, C.J. and Tapamo, H. (2009) 'Dispersion analysis and computational efficiency of Elastic Lattice methods for seismic wave propagation'. Computers & Geosciences, 35 :1768-1775.  
Lokmer, I., O'Brien, G.S., Stich, D. and Bean, C.J. (2009) 'Time reverse imaging of synthetic volcanic tremor sources'. Geophysical Research Letters, 36, L12308 .  
Zaccarelli L., Pandolfi D., Bianco F., Saccorotti G., Bean C.J. and Del Pezzo E. (2009) 'Temporal changes in seismic wave propagation towards the end of the 2002 Mt Etna eruption'. Geophysical Journal International, 178 (3):1779-1788.  
Möllhoff, M. and Bean, C.J. (2009) 'Validation of elastic wave measurements of rock fracture compliance using numerical discrete particle simulations'. Geophysical Prospecting, 57 (5):883-895.  
Martini, F., Bean, C.J., Saccorotti, G., Viveiros, F. and Wallenstein, N. (2009) 'Seasonal cycles of seismic velocity variations detected using coda wave interferometry at Fogo volcano, São Miguel, Azores, during 2003-2004'. Journal of Volcanology and Geothermal Research, 181 (3-4):231-246.  
O'Brien, G.S. and Bean, C.J. (2009) 'Volcano topography, structure and intrinsic attenuation: their relative influences on a simulated 3D visco-elastic wavefield'. Journal of Volcanology and Geothermal Research, 183 :123-137.  
Professor Anthony Brabazon
O'Neill, M., Swafford, J. M., McDermott, J., Byrne, J., Brabazon, A., Shotton. E., McNally, C. and Hemberg, M. (2009) 'Evolutionary Design using Grammatical Evolution and Shape Grammars: Designing a Shelter'. International Journal of Design Engineering .  
Hugosson, J., Hemberg, E., Brabazon, A. and O'Neill, M. (2009) 'An investigation of the mutation operator using different representations in Grammatical Evolution'. Applied Soft Computing .  
O'Neill, M. and Brabazon, A. (2009) 'Recent Patents on Genetic Programming'. Recent Patents on Computer Science, 2 (1):43-49. Available Online  
Fan, K., Brabazon, A., O'Sullivan, C. and O'Neill, M. (2009) 'A comparative study of the canonical genetic algorithm and a real-valued quantum-inspired evolutionary algorithm'. International Journal of Intelligent Computing and Cybernetics, 2 (3):494-512. Available Online  
Brabazon, A. O'Neill, M. and Dempsey, I. (2008) 'An Introduction to Evolutionary Computation in Finance'. IEEE Computational Intelligence Magazine, 3 (4):42-55.  
Dr Eimear Byrne
Bernard Blümich, Qingxia Gong, Eimear Byrne, Marcus Greferath (2009) 'NMR with excitation modulated by Frank sequences'. Journal of Magnetic Resonance, 199 (1):18-24.  
C. Bracken, E. Byrne, N. Markin, G. McGuire (2009) 'Fourier Spectra of Binomial APN Functions'. SIAM Journal of Discrete Mathematics, 23 (2):596-608.  
Dr Rodrigo Caballero
Caballero, R., and B. T. Anderson (2009) 'Impact of midlatitude stationary waves on regional Hadley cells and ENSO'. Geophysical Research Letters, 36 .  
Mitchell, J. L., Pierrehumbert, R. T., Frierson, D. M. W., and R. Caballero (2009) 'The impact of methane thermodynamics on seasonal convection and circulation in a model Titan atmosphere'. Icarus, 203 :250-264.  
Professor Pádraig Cunningham
Segata, N., Blanzieri, E., Delany, S.J., Cunningham, P. (2009) 'Noise Reduction for Instance-Based Learning with a Local Maximal Margin Approach '. Journal of Intelligent Information Systems . Available Online  
Cunningham, P. (2008) 'A Taxonomy of Similarity Mechanisms for Case-Based Reasoning'. IEEE Transactions on Knowledge and Data Engineering . Available Online  
Bryan, K., Brennan, L., Cunningham, P., (2008) 'MetaFIND: A feature analysis tool for metabolomics data'. BMC Bioinformatics, 9 . Available Online  
Villalba, S., Cunningham, P., (2008) 'An evaluation of dimension reduction techniques for one-class classification'. Artificial Intelligence Review, 27 (4):273-294. Available Online  
Bryan, K., Cunningham, P., (2008) 'Extending Bicluster Analysis to Annotate Unclassified ORFs and Predict Novel Functional Modules via Expression Data'. BMC Genomics, 9 (S20). Available Online  
Dr Benoit Gaudin
Brendan Sheehan, Aaron Quigley, Benoit Gaudin and Simon Dobson (2008) 'A relation basedmeasure of semantic similarity for Gene Ontology annotations'. BMC Bioinformatics, 9 .  
Professor Peter Lynch
Wim Verkley and Peter Lynch (2009) 'Energy and enstrophy spectra of geostrophic turbulent flows derived from a maximum entropy principle'. Journal of the Atmospheric Sciences, 66 (8):2216-2236. Available Online  
Peter Lynch (2009) 'On Resonant Rossby-Haurwitz triads'. Tellus, 61A :438-445. Available Online  
Semmler, T., S. Varghese, R. McGrath, P. Nolan, S. Wang, P. Lynch and C O'Dowd C (2008) 'Regional model simulation of North Atlantic cyclones: Present climate and idealized response to increased sea surface temperature'. Journal of Geophysical Research Atmospheres, .  
Peter Lynch and Gérard De Moor (2008) 'Les origines de la prévision numérique du temps et de la modélisation climatique'. La Meteorologie, 63 :14-24. Available Online  
Lynch, Peter & Owen Lynch (2008) ' Forecasts by PHONIAC'. Weather, 63 (11):324-326. Available Online  
Professor Joao Marques-Silva
Antonio Morgado and Joao Marques-Silva (2009) 'Combinatorial Optimization Solutions for the Maximum Quartet Consistency Problem'. Journal of Algorithms in Cognition, Informatics and Logic .  
Dr William McKiver
McKiver, W. J. & Neufeld, Z. (2009) 'The influence of turbulent advection on a phytoplankton ecosystem with nonuniform carrying capacity'. Physical Review E, 79 (6).  
Dr Zoltan Neufeld
William J. McKiver and Zoltan Neufeld (2009) 'Influence of turbulent advection on a phytoplankton ecosystem with nonuniform carrying capacity'. Physical Review E, 79 (6).  
Munoz-Garcia, J., Neufeld, Z. and Kholodenko, B. (2009) 'Positional Information Generated by Spatially Distributed Signaling Cascades'. PLoS Computational Biology, 5 (3).  
Professor Patrick Nixon
S. Dobson, G. Stevenson, G. Williamson, S. Knox, M. Stabler, L. Coyle, S. Neely, and P. Nixon (2008) 'Construct: towards a community middleware for pervasive computing'. PerAda Magazine .  
S. Knox, A. K. Clear, R. Shannon, L. Coyle, S. Dobson, A. Quigley, and P. Nixon (2008) 'Scatterbox: mobile message management'. Revue d¿Intelligence Artificielle .  
Dr Gareth Shane O'Brien
O'Brien, G.S., Bean, C.J. and Tapamo, H. (2009) 'Dispersion analysis and computational efficiency of Elastic Lattice methods for seismic wave propagation'. Computers & Geosciences, 35 :1768-1775.  
Lokmer, I., O'Brien, G.S., Stich, D. and Bean, C.J. (2009) 'Time reverse imaging of synthetic volcanic tremor sources'. Geophysical Research Letters, 36, L12308 .  
O'Brien, G.S. and Bean, C.J. (2009) 'Volcano topography, structure and intrinsic attenuation: their relative influences on a simulated 3D visco-elastic wavefield'. Journal of Volcanology and Geothermal Research, 183 :123-137.  
Drakakis, K., Rickard, S., Beard, J., Caballero, R., Lorio, F., O'Brien, G.S. and Walsh, J. (2008) 'Results of the enumeration of Costas arrays of order 27'. IEEE Transactions on Information Theory, 54 (10):4684-4687.  
Dr Michael O'Neill
Fan, K., Brabazon, A., O'Sullivan, C. and O'Neill, M. (2009) 'A comparative study of the canonical genetic algorithm and a real-valued quantum-inspired evolutionary algorithm'. International Journal of Intelligent Computing and Cybernetics . Available Online  
Professor Adrian Ottewill
Marc Casals, Sam Dolan, Adrian C. Ottewill, and Barry Wardell (2009) 'Self-force calculations with matched expansions and quasinormal mode sums'. Physical Review D, 79 (12):124043-1-124043-37.  
Marc Casals, Sam Dolan, Adrian Ottewill, Barry Wardell (2009) 'Pade Approximants of the Green Function in Spherically Symmetric Spacetimes'. Physical Review D, 79 (12):124044-1-124044-17.  
Ottewill, A. C., Wardell, B., (2009) 'Quasi-local contribution to the scalar self-force: Non-geodesic motion'. Physical Review D, 79 (2):024031-1-024031-10.  
Dr Gianluca Pollastri
Ian Walsh, Alberto JM Martin, Catherine Mooney, Enrico Rubagotti, Alessandro Vullo, Gianluca Pollastri (2009) 'Ab initio and homology based prediction of protein domains by recursive neural networks'. BMC Bioinformatics, 10 .  
Q.Le, G.Pollastri, P.Koehl (2009) 'Structural Alphabets for Protein Structure Classification: a Comparison Study'. Journal of Molecular Biology, 387 (2):431-450.  
C.Mooney and G.Pollastri (2009) 'Beyond the Twilight Zone: Automated prediction of structural properties of proteins by recursive neural networks and remote homology information'. Proteins, 77 (1):181-190.  
I.Walsh, D.Baú, A.J.M.Martin, C. Mooney, A.Vullo, G.Pollastri (2009) 'Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks'. BMC Structural Biology, 9 .  
Martin AJ, Bau D, Vullo A, Walsh I, Pollastri G (2008) 'Long-range information and physicality constraints improve predicted protein contact maps'. Journal of bioinformatics and computational biology, 5 (NA):1001-1020.  
Dr Aaron Quigley
Terrenghi L., Quigley A. and Dix A. (2009) 'A taxonomy for and analysis of multi-person-display ecosystems'. Journal of Personal and Ubiquitous Computing .  
Rashid R. and Quigley A. (2009) 'Ambient Displays in Academic Settings: Avoiding their Underutilization'. International Journal of Ambient Computing and Intelligence (IJACI), 1 (2):31-38.  
Dobson S, Sheehan B, Quigley A, Gaudin B, (2008) 'A relation based measure of semantic similarity for Gene Ontology annotations'. BMC Bioinformatics, 9 (1).  
Dr Scott Thurston Rickard
L. Barber, K. Drakakis, S. Rickard (2009) 'On the complexity of the verification of the Costas property'. Proceedings of the IEEE, 97 (3):586-593.  
K. Drakakis, R. Gow, S. Rickard (2009) 'Common distance vectors between Costas arrays'. Advances in Mathematics of Communications, 3 (1):35-52.  
K. Drakakis, S. Rickard, R. Gow (2008) 'Interlaced Costas Arrays do not exist'. Mathematical Problems in Engineering, 2008 (Article ID 456034).  
K. Drakakis, S. Rickard, J. Beard, R. Caballero, F. Iorio, G. O'Brien, J. Walsh (2008) 'Results of the enumeration of Costas arrays of order 27'. IEEE Transactions on Information Theory, 54 (10):4684-4687.  
Professor Denis Shields
Moran N, Bernard E, Parthasarathi L, Cho MK, Aylward K, Raab M, Daxecker H, O'Dushlaine CT, Shields DC, Devocelle M, Keyes T, Cosgrave L, O'Neill S, Mok KH, (2009) 'Ligand switching in cell-permeable peptides: manipulation of the alpha-integrin signature motif'. Chemistry & biology, 4 (6):457-471.  

Edwards RJ, Davey NE, Shields DC, (2009) 'Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery'. Bioinformatics, 25 (4):443-450.  
Shields DC, Parthasarathi L, Casey F, Stein A, Aloy P, (2008) 'Approved Drug Mimics of Short Peptide Ligands from Protein Interaction Motifs'. Journal of Chemical Information and Modeling .  
Shields DC, Casey FP, Cagney G, Krogan NJ, (2008) 'Optimal stepwise experimental design for pairwise functional interaction studies'. Bioinformatics .  
Dr Emil Vassev
Olga Ormandjieva and Emil Vassev (2008) 'ASSL Specification of a Self-Scheduling Modeling and Monitoring in Reactive Autonomic Systems: Team-Robotics Case Study'. International Transactions on Systems Science and Applications, 4 (3):277-286. Available Online  
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Other Journals
Professor Anthony Brabazon
O'Neill, M., Hemberg, E., Giligan, C. Bartley, E., McDermot, J. and Brabazon, A. (2008) 'GEVA: Grammatical Evolution in Java' SIGEVOlution, 3 (2):17-22.Available Online  
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Conference Publications
Professor Christopher Bean
Bean, C.J. (2009) Volcano source processes: Lessons from combined high resolution field data and computational seismology. (invited) Seminar Series, Ludwig-Maximilians-University, Munich, Germany  
Bean, C.J., O'Brien, G.S., De Barros, L., Murphy, S., Lokmer, I., Saccorotti, G., Patanè, D. and Métaxian, J-P. (2009) Constraining Volcano Source Rheology and Mechanisms: 3D Full Wavefield Simulations and Very High Resolution Observations From Mt Etna. (invited) AGU 2009 Joint Assembly, Eos Transactions, 90(22), V32B-08,  
Montagna, C.P., Longo, A., Vassalli, M., Papale, P., Saccorotti, G., O'Brien, G.S. and Bean, C.J. (2009) Influence of dyke geometry on the dynamics of magma flow and associated ground displacement and seismic signals EGU General Assembly 2009, Geophysical Research Abstracts, Vol. 11, EGU2009-12805 Available Online  
Bean, C.J. and O'Brien, G.S. (2009) Seismic signatures of sub-surface fluid motion: Numerical simulations and field observations. (invited) EGU General Assembly 2009, Geophysical Research Abstracts, Vol. 11, EGU2009-13185-1 Available Online  
Bean, C.J. and O'Brien, G.S. (2009) Numerical tools for modelling the origins of seismic signals on volcanoes EGU General Assembly 2009, Geophysical Research Abstracts, Vol. 11, EGU2009-13809 Available Online  
De Barros, L., Bean, C.J., Zuccarello, L., Saccorotti, G., O'Brien, G., Lokmer, I., Metaxian, J.P. (2009) Elements of the plumbing system beneath Etna Volcano from localisation of long-period events recording by a high density network 52nd Irish Geological Research Meeting, Trinity College Dublin, Dublin, Ireland,  
Cociani, L., Bean, C.J., Lyon-Caen, H. and Möllhoff, M (2009) The Role of Static and Dynamic stress changes associated with the M=4.3 event in the Gulf of Corinth, Greece 52nd Irish Geological Research Meeting,  
Murphy, S. and Bean C. J. (2008) Generating low frequency radiation from stick slip rupture AGU Fall Meeting, Eos Transactions, 89(53), S41A-1830  
Murphy, S. and Bean, C.J. (2008) The effects that local media and stress play in earthquake rupture ESF-FWF Conference: New challenges in Earthquake Dynamics: Observing and Modelling a multiscale system, Innsbruck, Austria, Abstracts  
Bean, C.J., Cociani, L. and Lyon-Caen, H. (2008) Seismic velocity changes associated with the Agios Ioanis M= 4.3 event in the Gulf of Corinth, Greece: Possible evidence for static stress change induced fault unclamping ESF-FWF Conference: New challenges in Earthquake Dynamics: Observing and Modelling a multiscale system, Innsbruck, Austria, Abstracts  
Dr Chris Bleakley
Ballal, T. and Bleakley, C.J. (2009) 3D Location and Orientation Estimation using Angle of Arrival IEEE Int. Symp. on Intelligent Signal Processing (WISP) , Budapest, Hungary,  
Patel, K., et al. (2009) MAW: A Reliable Lightweight Multi-Hop Wireless Sensor Network Routing Protocol Int. Conf. on Computer Science and Engineering, Vancouver, Canada, 487 - 493  
Ballal, T. and Bleakley, C.J. (2009) DOA Estimation of Multiple Sparse Sources Using Three Widely-Spaced Sensors European Signal Processing Conference (EUSIPCO), Glasgow, Scotland, U.K, 1978 - 1982 Available Online  
Phelan, C., Bleakley, C.J. and Cummins, F. (2009) Adapting and Parameterising Auditory Icons for use in a Synthetic Musical Instrument IET Irish Signals and Systems Conference (ISSC), Dublin, Ireland,  
Reviriego, P. et al. (2009) Soft Error Detection and Correction for FFT Based Convolution using Different Block Lengths IEEE International On-Line Testing Symposium (IOLTS),  
O'Donnell, A. et al. (2009) Efficient Concurrent Error Detection and Correction of Soft Errors in NTT-based Convolutions IET Irish Signals and Systems Conference (ISSC), Dublin, Ireland,  
Patel, K., Chua, C.P. and Bleakley, C.J. (2009) Low Power Real-Time Seizure Detection for Ambulatory EEG Int. Conf. on Pervasive Computing Technologies for Healthcare 2009, London, U.K, 1 - 7 Available Online  
Lim, J.C. and Bleakley, C.J. (2008) Extending the Lifetime of Sensor Networks Using Prediction and Scheduling Int. Conf. on Intelligent Sensors, Sensor Networks and Information Processing (ISSNIP), Syndey, Australia,  
Professor Anthony Brabazon
O'Neill, M., Swafford, J. M., McDermott, J., Byrne, J., Brabazon, A., Shotton. E., McNally, C. and Hemberg, M. (2009) Shape Grammars and Grammatical Evolution for Evolutionary Design Genetic and Evolutionary Computation Conference (GECCO 2009), Montreal, Canada,  
Byrne, J., O'Neill, M., McDermott, J. and Brabazon, A. (2009) Structural and Nodal Mutation in Grammatical Evolution Proceedings of the Genetic and Evolutionary Computation Conference (GECCO 2009), Montreal, Canada,  
Le-Khac, N. A., Markos, S., O'Neill, M., Brabazon, A. and Kechadi, M. T. (2009) An investigation into Data Mining approaches for Anti-money Laundering IEEE International Conference on Knowledge Discovery, (ICKD'09), Manila, Philippines,  
Le-Khac,, N. A., Markos, S., O¿Neill, M., Brabazon, A. and Kechadi, M. T. (2009) An Efficient Search Tool for an Anti-Money Laundering Application of an Multi-National Bank's Dataset . In: CESRA Press eds. 2009 International Conference on Information and Knowledge Engineering (IKE'09), Las Vegas, USA,  
Hemberg E., O'Neill M. and Brabazon A. (2009) An investigation into automatically defined function representations in Grammatical Evolution Mendel 2009 15th International Conference on Soft Computing, Brno, Czech Republic,  
Fan, K., Brabazon, A., O'Sullivan, C. and O'Neill, M. (2009) Intorduction to Agent-based Modelling and its Applications in Finance 22nd Annual Irish Accounting and Finance Association Conference, UCD,  
Cui, W., Brabazon, A., O¿Sullivan, C. and O'Neill, M. (2009) Evolutionary Computation and Trade Execution 22nd Annual Irish Accounting and Finance Association Conference, UCD,  
Byrne J., O'Neill M., Hemberg E., Brabazon A. (2009) Analysis of Constant Creation Techniques on the Binomial-3 Problem in Grammatical Evolution IEEE Congress on Evolutionary Computation, Trondheim, Norway,  
Dang, J., Brabazon, A., Dempsey, I. and O'Neill, M. (2009) Natural Computing in Finance: A Review . In: Giacobini, M., Brabazon, A. et al eds. 3rd European Workshop on Evolutionary Computation in Finance and Economics (EvoFin 2009), Tubingen, Germany,  
Bradley, R., Brabazon, A. and O'Neill, M. (2009) Dynamic High-frequency Trading: A Neuro-Evolutionary Approach . In: Giacobini, M., Brabazon, A. et al eds. 3rd European Workshop on Evolutionary Computation in Finance and Economics (EvoFin 2009), Tubingen, Germany,  
Dr Eimear Byrne
E. Byrne, M. Greferath, A. Kohnert, V. Skachek (2009) Refined Bounds for Ring-Linear Codes . In: Peter Boyvalenkov eds. Sixth International Workshop on Optimal Codes and Related Topics, Varna, Bulgaria, 55 - 61  
Professor Pádraig Cunningham
Foley, R., Callanan, S., Gallagher, W., Cunningham, P., (2009) A Machine Learning System for Identifying Hypertrophy in Histopathology Images . In: Freyne, J., Coyle, L., Dunnion, D eds. 20th Irish Conference on Artificial Intelligence and Cognitive Science (AICS 2009),  
Duggan, B., Gainza, M., O'Shea, B., Cunningham, P. (2009) Compensating for Expressivness in Queries to a Content Based Music Information Retrieval System International Computer Music Conference (ICMC 2009), Montreal, Canada,  
Brew, A., Greene, D. and Cunningham, P. (2009) A Machine Learning System for Tracking Sentiment in Irish Economic News 20th Irish Conference on Artificial Intelligence and Cognitive Science (AICS'09),  
O'Mahony, M.P., Cunningham, P., Smyth, B., (2009) An Assessment of Machine Learning Techniques for Review Recommendation . In: Freyne, J., Coyle, L., Dunnion, D. eds. 20th Irish Conference on Artificial Intelligence and Cognitive Science (AICS 2009),  
Segata, N., Blanzieri, E., Cunningham, P., (2009) A Scalable Noise Reduction Technique for Large Case-Base Systems . In: L. McGinty D.C., Wilson eds. 8th International Conference of Case-Based Reasoning (ICCBR 2009)0, Seattle, USA, 328 - 342  
Brew, A., Cunningham, P., (2009) Combining Cohort And UBM Models In Open Set Speaker Identification 7th International Workshop on Content-Based Multimedia Indexing, Available Online  
Greene, D. and Cunningham, P. (2009) Multi-view clustering for mining heterogeneous social network data Workshop on Information Retrieval over Social Networks, 31st European Conference on Information Retrieval (ECIR'09),  
Bryan, K., O'Mahony, M.P., Cunningham, P., (2008) Unsupervised retrieval of attack profiles in collaborative recommender systems . In: P. Pu, D. G. Bridge, B. Mobasher, F. Ricci eds. 2nd ACM International Conference on Recommender Systems (RecSys2008), Lausanne, Switzerland, 155 - 162 Available Online  
Greene, D., Bryan, K. and Cunningham, P. (2008) Parallel Integration of Heterogeneous Genome-Wide Data Sources 8th International Conference on BioInformatics and BioEngineering (BIBE 2008),  
Greene, D., Freyne, J., Smyth, B. and Cunningham, P. (2008) An Analysis of Research Themes in the CBR Conference Literature . In: K-D Althoff, R. Bergmann, M. Minor, A. Hanft eds. 9th European Conference on Case-Based Reasoning (ECCBR 2008), 18 - 43 Available Online  
Duggan, B., Gainza, M., O'Shea, B., Cunningham, P. (2008) Machine Annotation of Sets of Traditional Irish Dance Tunes . In: J.P. Bello, E. Chew, D. Turnbull eds. 9th International Conference on Music Information Retrieval (ISMIR 2008), Philadelphia, 401 - 406 Available Online  
Dr Simon Andrew Dobson
Juan Ye and Lorcan Coyle and Simon Dobson and Paddy Nixon (2009) Using situation lattices in sensor analysis Proceedings of the 7th IEEE International Conference on Pervasive Computing and Communications (Percom'09),  
Hui Zhang, Paddy Nixon and Simon Dobson (2008) Multi-criteria adaptation mechanisms in homological sensor networks 11th IEEE International Conference on Communciations Systems, Guangzhou, CN,  
Emerson Loureiro, Paddy Nixon and Simon Dobson (2008) A fine-grained model for adaptive on-demand provisioning of CPU shares in data centres 3rd International Workshop on Self-Organising Systems (IWSOS 2008), Vienna, AT,  
M.A. Razzaque, Simon Dobson and Paddy Nixon (2008) Cross-layer self routing: a self-managed routing approach for MANETs 4th IEEE International Conference on Wireless and Mobile Computing, Avignon, FR,  
Olga Murdoch, Lorcan Coyle and Simon Dobson (2008) Ontology-based query recommendation as a support to image retrieval 19th Irish Conference In Artificial Intelligence and Cognitive Science, Cork, IE,  
Adrian K. Clear, Ross Shannon, Thomas Holland, Simon Dobson, Aaron Quigley and Paddy Nixon (2008) Situvis: visualising multivariate context information to evaluate situation specifications 2nd International Workshop on Ubiquitous Systems Evaluation (USE 2008), Seoul, KR,  
Dr Peter Duffy
Tamm J. , P. Duffy (2008) Particle acceleration timescales in TeV Blazar flares Proceedings of the Heidelberg Symposium on High-Energy gamma ray astronomy,  
Reville B. J.G. Kirk, P. Duffy (2008) Steady state solutions to cosmic-ray modified shocks Proceedings of the Heidelberg Symposium on High-Energy gamma ray astronomy,  
Dr Derek Greene
Brew, A., Greene, D. and Cunningham, P. (2009) A Machine Learning System for Tracking Sentiment in Irish Economic News 20th Irish Conference on Artificial Intelligence and Cognitive Science (AICS'09),  
Greene, D. and Cunningham, P. (2009) Multi-view clustering for mining heterogeneous social network data Workshop on Information Retrieval over Social Networks, 31st European Conference on Information Retrieval (ECIR'09),  
Greene D., Bryan K., Cunningham P. (2008) Parallel Integration of Heterogeneous Genome-Wide Data Sources 8th International Conference on BioInformatics and BioEngineering (BIBE 2008), Athens, Greece, Available Online  
Greene D., Freyne J., Smyth B., Cunningham P. (2008) An Analysis of Research Themes in the CBR Conference Literature 9th European Conference on Case-Based Reasoning (ECCBR'08), Trier, Germany, Available Online  
Dr Joseph Kiniry
Kiniry, J. and Zimmerman, D. (2009) A Verification-centric Software Development Process for Java The 9th International Conference on Software Quality,  
Janota, M. et al. (2009) CLOPS: A DSL for Command Line Options IFIP Domain Specific Languages Working Conference (DSL-WC 2009), Available Online  
Kiniry, J. and Fairmichael, F. (2009) Ensuring Consistency between Designs, Documentation, Formal Specifications, and Implementations Component-based Software Engineering (CBSE 2009), Available Online  
Professor Patrick Nixon
W. Zhou, Z. Wei, M. Kang, P. Nixon, and L. Jia (2009) A credit-based incentive mechanism for recommendation acquisition in multihop mobile ad hoc networks The Third International Conference Emerging Security Information, Systems and Technologies (SECURWARE09),  
G. Stevenson, S. Knox, S. Dobson, and P. Nixon (2009) Ontonym: A collection of upper ontologies for developing pervasive systems the European Semantic Web Conference,  
A. K. Clear, R. Shannon, T. Holland, A. Quigley, S. Dobson, and P. Nixon (2009) Situvis: a visual tool for modeling a user¿s behaviour patterns in a pervasive environment 7th International Conference on Pervasive Computing,  
M. Stabeler, G. Stevenson, S. Dobson, and P. nixon (2009) Basadaeir: harvesting user profiles to bootstrap pervasive applications The Seventh International Conference on Pervasive Computing - Late Breaking Results,  
R. Shannon, M. Stabeler, A. Quigley, and P. Nixon (2009) Profiling and targeting opportunities in pervasive advertising 1st Workshop on Pervasive Advertising, vol. 1,  
L. Coyle, J. Ye, S. McKeever, S. Knox, M. Stabeler, S. Dobson, , and P. Nixon (2009) Gathering datasets for activity identification the Workshop on Developing Shared Home Behaviour Datasets to Advance HCI and Uniquitous Computing Research at CHI 2009,  
J. Ye, L. Coyle, S. Dobson, and P. Nixon (2009) Using situation lattices in sensor analysis IEEE International Conference on Pervasive Computing and Communications (PerCom 2009),  
R. Shannon, A. Quigley, and P. Nixon (2009) Time sequences CHI ¿09 extended abstracts on human factors in computing systems,  
J. Doyle, A. Quigley, and P. Nixon (2009) Do pattern languages help us structure evaluations in healthcare technologies? CHI 2009 Workshop on Evaluating New Interactions in Healthcare: Challenges and Approaches,  
E. Loureiro, P. Nixon, and S. Dobson (2008) A fine-grained model for adaptive on-demand provisioning of cpu shares in data centres the 3rd International Workshop on Self-Organizing Systems,  
H. Zhang, P. Nixon, and S. Dobson (2008) Multi criteria adaptation in homological sensor networks 11th IEEE International Conference on Communications Systems (ICCCS),  
G. L. Insua, M. Bennett, P. Nixon, and L. Coyle (2008) User generated ambient presence 2nd Workshop on Ambient Information Systems,  
Dr Gareth Shane O'Brien
Bean, C.J., O'Brien, G.S., De Barros, L., Murphy, S., Lokmer, I., Saccorotti, G., Patanè, D. and Métaxian, J-P. (2009) Constraining Volcano Source Rheology and Mechanisms: 3D Full Wavefield Simulations and Very High Resolution Observations From Mt Etna. (invited) AGU 2009 Joint Assembly, Eos Transactions, 90(22), V32B-08,  
Bean, C.J. and O'Brien, G.S. (2009) Numerical tools for modelling the origins of seismic signals on volcanoes EGU General Assembly 2009, Geophysical Research Abstracts, Vol. 11, EGU2009-13809 Available Online  
Montagna, C.P., Longo, A., Vassalli, M., Papale, P., Saccorotti, G., O'Brien, G.S. and Bean, C.J. (2009) Influence of dyke geometry on the dynamics of magma flow and associated ground displacement and seismic signals EGU General Assembly 2009, Geophysical Research Abstracts, Vol. 11, EGU2009-12805 Available Online  
Bean, C.J. and O'Brien, G.S. (2009) Seismic signatures of sub-surface fluid motion: Numerical simulations and field observations. (invited) EGU General Assembly 2009, Geophysical Research Abstracts, Vol. 11, EGU2009-13185-1 Available Online  
Dr Michael O'Neill
Byrne, J., O'Neill, M., McDermott, J., Brabazon, A. (2009) Structural and Nodal Mutation in Grammatical Evolution Genetic and Evolutionary Computation Conference GECCO 2009, Montreal, Canada,  
O'Neill, M., Swafford, J. M., McDermott, J., Byrne, J., Brabazon, A., Shotton, E., McNally, C., and Hemberg, M. (2009) Shape Grammars and Grammatical Evolution for Evolutionary Design Genetic and Evolutionary Computation Conference (GECCO 2009), Montreal, Canada,  
Murphy J., O'Neill M., Carr H. (2009) Gait Optimisation for Distinct Horse Models using Grammatical Evolution Mendel 2009 15th International Conference on Soft Computing,  
Nguyen Q.U., Nguyen X.H., O'Neill M. (2009) Semantics Based Mutation in Genetic Programming: The case for real-valued symbolic regression Mendel 2009 15th International Conference on Soft Computing,  
Hemberg E., O'Neill M., Brabazon A. (2009) n investigation into automatically defined function representations in Grammatical Evolution Mendel 2009 15th International Conference on Soft Computing,  
Le-Khac, N. A., Markos, S., O'Neill, M., Brabazon, A. and Kechadi, M. T. (2009) An investigation into Data Mining approaches for Anti-money Laundering IEEE International Conference on Knowledge Discovery, (ICKD'09), Manila, Philippines,  
Byrne, J., O'Neill, M., Hemberg, E., Brabazon, A. (2009) Analysis of Constant Creation Techniques on the Binomial-3 Problem in Grammatical Evolution IEEE Congress on Evolutionary Computation, Trondheim, Norway,  
Cui, W., Brabazon, A., O¿Sullivan, C. and O'Neill, M. (2009) Evolutionary Computation and Trade Execution 22nd Annual Irish Accounting and Finance Association Conference, UCD,  
Fan, K., Brabazon, A., O'Sullivan, C. and O'Neill, M. (2009) Intorduction to Agent-based Modelling and its Applications in Finance 22nd Annual Irish Accounting and Finance Association Conference, UCD,  
Dang, J., Brabazon, A., Dempsey, I. and O'Neill, M. (2009) Natural Computing in Finance: A Review . In: Giacobini, M., Brabazon, A. et al eds. 3rd European Workshop on Evolutionary Computation in Finance and Economics (EvoFin 2009), Tubingen, Germany,  
Bradley, R., Brabazon, A. and O'Neill, M. (2009) Dynamic High-frequency Trading: A Neuro-Evolutionary Approach . In: Giacobini, M., Brabazon, A. et al eds. 3rd European Workshop on Evolutionary Computation in Finance and Economics (EvoFin 2009), Tubingen, Germany,  
Nguyen, Q.U., Nguyen, X.H., O'Neill, M. (2009) Semantic Aware Crossover for Genetic Programming: the case for real-valued function regression EuroGP 2009 the 12th European Conference on Genetic Programming, Tubingen, Germany,  
Murphy, J.E., O'Neill, M., Carr, H. (2009) Exploring Grammatical Evolution for Horse Gait Optimisation EuroGP 2009 the 12th European Conference on Genetic Programming, Tubingen, Germany,  
Reddin, J., McDermott, J., Brabazon, A., O'Neill, M. (2009) Elevated Pitch: Automated Grammatical Evolution of Short Compositions 7th European Workshop on Evolutionary and Biologically Inspired Music, Sound, Art and Design , Tubingen, Germany, Available Online  
Dr Gianluca Pollastri
A.J.M.Martin, G.Pollastri (2009) Neural Network Pairwise Interaction Fields for protein model quality assessment Intelligent Systems for Molecular Biology,  
Q.Le, P. Koehl, G.Pollastri (2009) Combining Kernels for SVM-based Classification of protein structral sequences Intelligent Systems for Molecular Biology 2009,  
I.Walsh, A.Vullo, G.Pollastri (2009) An adaptive model for learning molecular endpoints . In: M.Biehl, B.Hammer, S.Hochreiter, S.C. Kremer and T.Villmann eds. Similarity-based learning on structures , Dagstuhl Seminars series0, Dagstuhl, Germany, Available Online  
A.J.M.Martin, A.Vullo, G.Pollastri (2009) Neural Network Pairwise Interaction Fields for protein model quality assessment LION3, Trento, Italy, Available Online  
Mooney C, Pollastri G (2008) Automated prediction of protein backbone structural motifs by recursive neural networks and remote homology information ECCB 2008, Cagliari, Italy,  
Dr Aaron Quigley
Vassev E., Hinchey M. and Quigley A. (2009) A self-adaptive architecture for autonomic systems developed with ASSL 4th International Conference on Software and Data Technologies (ICSOFT 2009),  
Rashid U. and Quigley A. (2009) Interaction Techniques for Binding Smartphones:A Desirability Evaluation 13th International Conference on Human-Computer Interaction,  
Cowzer N. and Quigley A. (2009) GeoIGM: a Location-Aware IGM Platform 5th International Workshop on Collaborative Peer-to-Peer Systems (COPS 2009), Groningen (The Netherlands),  
Shannon R. and Quigley A. (2009) From intrusive to supportive: recommendations for pervasive advertising Pervasive 2009 workshop on Pervasive Advertising, Nara, Japan,  
Shannon R., Stabeler M. and Quigley A. (2009) Profiling and targeting opportunities in pervasive advertising Pervasive 2009 workshop on Pervasive Advertising, Nara, Japan,  
Vassev E., Hinchey M. and Quigley A. (2009) Model Checking for Autonomic Systems Specified with ASSL Proc. First NASA Formal Methods Symposium (NFM 2009),  
Shannon R., Quigley A. and Nixon P. (2009) Time Sequences CHI '09 Extended Abstracts on Human Factors in Computing Systems, Boston, Massachusetts,  
Vassev E., Hinchey M. and Quigley A. (2009) Model Checking for Autonomic Systems Specified with ASSL First NASA Formal Methods Symposium (NFM 2009),  
Doyle J., Quigley A. and Nixon P. (2009) Do Pattern Languages help us Structure Evaluations in Healthcare Technologies? CHI  2009 Workshop on Evaluating New Interactions in Healthcare: Challenges and Approaches, Boston, Massachusetts,  
Rashid U. and Quigley A. (2009) Designing for Collaboration: Professional Information Management (PIM) in Research Communities CHI 2009 Workshop on the Changing Face of Digital Science: New Practices in Scientific Collaborations, Boston, Massachusetts,  
Farrugia M. and Quigley A. (2009) Visual data exploration of temporal graph data Conference on Visualization and Data Analysis 2009, Part of IS&T/SPIE's International Symposium on Electronic Imaging 2009, San Jose, CA, USA,  
Farrugia M. and Quigley A. (2008) Cell phone Mini Challenge: Node-link animation award animating multivariate dynamic social networks IEEE Symposium on Visual Analytics Science and Technology 2008 (VAST '08), Columbus, OH, USA,  
Clear A.K, Shannon R., Holland T., Dobson S., Quigley A. and Nixon P. (2008) Situvis: visualising multivariate context information to evaluate situation specifications . In: Graeme Stevenson, Steve Neely, Christian Kray eds. 2nd Workshop on Ubiquitous Systems Evaluation (USE '08) ,  
Umer Rashid and Aaron Quigley (2008) Ambient Displays in Academic Settings: Avoiding their Underutilization Ambient Information Systems Workshop at UbiComp 2008, COEX, Seoul, South Korea,  
Eugene Kenny, Ross Shannon and Aaron Quigley (2008) Stay-in-touch: a system for ambient social reminders Ambient Information Systems Workshop at UbiComp 2008, COEX, Seoul, South Korea,  
Dr Scott Thurston Rickard
R. de Frein, S. Rickard, K. Drakakis (2009) Extracting GARCH E ects from Asset Returns using Robust NMF IEEE Digital Signal Processing Workshop, Marco Island, Florida, USA,  
A. Moni, S. Rickard (2009) Comparison of Localization Algorithms using Attenuation Estimates IEEE Digital Signal Processing Workshop, Marco Island, Florida, USA,  
R. de Frein, S. Rickard (2008) Sparse Multi-channel Echoic Source Separation IMA International Conference on Mathematics in Signal Processing, The Royal Agricultural College, Cirencester, UK,  
A. Moni, S. Rickard (2008) Comparison of Localization Algorithms using Time Delay of Arrival Estimates IMA International Conference on Mathematics in Signal Processing, The Royal Agricultural College, Cirencester, UK,  
P. O'Grady and S. Rickard (2008) Non-negative Matrix Factorisation of Compressively-Sampled Non-Negative Signals IMA International Conference on Mathematics in Signal Processing, The Royal Agricultural College, Cirencester, UK,  
P. O'Grady and S. Rickard (2008) Compressive Sampling Of Non-Negative Signals IEEE International Workshop on Machine Learning for Signal Processing, Cancun, Mexico,  
N. Hurley and S. Rickard (2008) Comparing Measures Of Sparsity IEEE International Workshop on Machine Learning for Signal Processing, Cancun, Mexico,  
Dr Emil Vassev
Emil Vassev and Mike Hinchey (2009) Modeling the Image-processing Behavior of the NASA Voyager Mission with ASSL 3rd IEEE International Conference on Space Mission Challenges for Information Technology (SMC-IT'09), Pasadena, California, USA, 246 - 253  
Emil Vassev, Mike Hinchey, and Aaron Quigley (2009) A Self-adaptive Architecture for Autonomic Systems Specified with ASSL 4th International Conference on Software and Data Technologies (ICSOFT 2009) - Volume 1, Sofia, Bulgaria, 163 - 168  
Emil Vassev and Serguei A. Mokhov (2009) Self-Optimization Property in Autonomic Specification of Distributed MARF with ASSL 4th International Conference on Software and Data Technologies (ICSOFT 2009) - Volume 1, Sofia, Bulgaria, 331 - 335  
Emil Vassev, Mike Hinchey, and Aaron Quigley (2009) Towards Model Checking with Java PathFinder for Autonomic Systems Specified and Generated with ASSL 4th International Conference on Software and Data Technologies (ICSOFT 2009) - Volume 1, Sofia, Bulgaria, 251 - 256  
Serguei A. Mokhov and Emil Vassev (2009) Autonomic Specification of Self-Protection for Distributed MARF with ASSL C* Conference on Computer Science & Software Engineering (C3S2E '09), ACM, Montreal, Canada, 175 - 183 Available Online  
Emil Vassev and Serguei A. Mokhov (2009) An ASSL-Generated Architecture for Autonomic Systems C* Conference on Computer Science & Software Engineering (C3S2E '09), ACM, Montreal, Canada, 121 - 126 Available Online  
Marco Bakera, Christian Wagner, Tiziana Margaria, Emil Vassev, Mike Hinchey, and Bernhard Steffen (2009) Component-Oriented Behavior Extraction for Autonomic System Design . In: Ewen Denney, Dimitra Giannakopoulou, Corina S. Pasareanu eds. First NASA Formal Methods Symposium (NFM 2009), NASA Aims, Moffett Field, California, 66 - 75 Available Online  
Emil Vassev and Mike Hinchey (2009) ASSL Specification and Code Generation of Self-Healing Behavior for NASA Swarm-Based Systems 6th IEEE International Workshop on Engineering of Autonomic and Autonomous Systems (EASe'09), San Francisco, Ca, USA, 77 - 86  
Emil Vassev, Mike Hinchey, and Aaron Quigley (2009) Model Checking for Autonomic Systems Specified with ASSL . In: Ewen Denney, Dimitra Giannakopoulou, Corina S. Pasareanu eds. First NASA Formal Methods Symposium (NFM 2009), NASA Aims, Moffett Field, California, 16 - 25 Available Online  
Emil Vassev and Mike Hinchey (2008) An Emergent Self-Adapting Behavior Model for NASA Swarm-Based Exploration Missions 2nd IEEE International Conference on Self-Adaptive and Self-Organizing Systems (SASO 2008), Venice, Italy, 473 - 474  
Emil Vassev and Mike Hinchey (2008) ASSL Specification of Emergent Self-Adapting for NASA Swarm-Based Exploration Missions 2nd IEEE International Conference on Self-Adaptive and Self-Organizing Systems Workshops (SASOW 2008), Venice, Italy, 13 - 18  
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