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UCD School of Agriculture, Food Science & Veterinary Medicine

'Deep Sequence Analysis'. Image by Pablo Rojas.

'Deep Sequence Analysis'. Image by Pablo Rojas.

UCD School of Agriculture, Food Science & Veterinary Medicine- Research Publications 2008/09

Below is the list of research publications for the UCD School of Agriculture, Food Science & Veterinary Medicine in the academic year 2008/09




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Books
Dr Ger Jason Devlin
Devlin, Ger (2009) TO DEVELOP A ROUTE COSTING MODEL USING GIS, GPS AND SDSS TECHNOLOGY. Germany: VDM.  
Dr Deirdre O'Connor
Di Iacovo, F. and O' Connor, D. (2009) Supporting Policies for Social Farming In Europe. Firenze: ARSIA.  
Professor Da-Wen Sun
Sun, Da-Wen (Editor) (2008) Computer Vision Technology for Food Quality Evaluation. San Diego, California, USA: Academic Press / Elsevier, 608 pp. Available Online  
Sun, Da-Wen (Editor) (2008) Infrared Spectroscopy for Food Quality Analysis and Control. San Diego, California, USA: Academic Press / Elsevier, 416 pp. Available Online  
Sun, Da-Wen (Editor) (2008) Modern Techniques for Food Authentication. San Diego, California, USA: Academic Press / Elsevier, 720 pp. Available Online  
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Book Chapters
Professor Pieter Brama
Brama PAJ (2009) 'Osteochondrosis' In: Robinson and Sprayberry (eds). Current Therapy in Equine Medicine. St. Louis: Saunders Elsevier.  
Ms Diane Cashman
Diane Cashman David Jennings (2008) 'Mature Cynics and Fledgling Eclectics: Elaborating Instructional Design for the Net Generation' In: Bettie Higgs Marian McCarthy (eds). Emerging Issues II The Changing Roles and Identities of Teachers and Learners in Higher Education. Cork: NAIRTL. Available Online  
Dr Enda Cummins
Coffey R. and Cummins E. (2009) 'Pathogenic Microorganisms in drinking water' In: Heldman, R (eds). Encyclopedia of Agriculture, Food and Biological Engineering. London, UK: Taylor and Francis.  
O'Brien N. and Cummins E. (2009) 'Development of a three-level risk assessment strategy for nanomaterials' In: Linkov, I. and Steevens, J (eds). Nanomaterials: Risks and Benefits. Dordrecht, The Netherlands: Springer.  
Cummins E. (2008) 'Nanoparticle risk assessment' In: Heldman, D.R (eds). Encyclopedia of Agriculture, Food and Biological Engineering. London, UK: Taylor and Francis.  
Mr Florent David
David, F. and Laverty, S. (2008) 'Thoracic Trauma' In: J-P Lavoie & KW Hinchcliff (eds). Blackwell's Five-Minute Veterinary Consult - Equine - Second Edition. Ames, Iowa, USA: Wiley-Blackwell.  
David, F. and Laverty, S. (2008) 'Pneumothorax' In: J-P Lavoie & KW Hinchcliff (eds). Blackwell's Five-Minute Veterinary Consult - Equine - Second Edition. Ames, Iowa, USA: Wiley-Blackwell.  
Dr Adriana Edith Delgado
Zheng, L.; Delgado, A.E. and Sun, D.-W. (2009) 'Surface Heat Transfer Coefficients with and without Phase Change' In: Rahman, S (eds). Food Properties Handbook, 2nd Edition. Boca Raton, FL, USA: CRC Press, Inc.  
Dr Colette Fagan
Fagan C.C., O'Donnell, C.P., Rudzik, L., Wüst (2009) 'Milk and Dairy Products' In: Da-Wen Sun (eds). Infrared Spectroscopy for Food Quality Analysis and Control. San Diego, USA: Academic Press.  
Fagan, C., O'Donnell C.P. and Cullen, P.J. (2009) 'Monitoring and control of mixing operations' In: Cullen, P.J (eds). Food Mixing: Principles and Applications. England: Blackwell.  
Professor Nick Holden
J. Eitzinger, S. Thaler, S. Orlandini, P. Nejedlik, V. Kazandjiev, V. Vucetic, T. H. Sivertsen, D. T. Mihailovic, B. Lalic, E. Tsiros, N. R. Dalezios, A Susnik, C. K. C. Kersebaum, N. M. Holden and R. Matthews (2008) 'Agroclimatic Indices and Simulation Models' In: P. Nejedlik and S. Orlandini (eds). Survey of Agrometeorological Practices and Applications in Europe Regarding Climate Change Impacts. Brussels, Belgium: ESF / COST / ESSEM. Available Online  
Dr Carol Iversen
Angelika Lehner, Roger Stephan, Carol Iversen, S. Fanning (2009) 'Enterobacter' In: Dongyou Liu (eds). Molecular Detection of Foodborne Pathogens. Boca Raton: CRC Press. Available Online  
Dr Deirdre O'Connor
Feehan, J. and O Connor, D. (2009) 'Agriculture and Multifunctionality in Ireland' In: John McDonagh, Tony Varley ans Sally Shortall (eds). A Living Countryside? The Politics of Sustainable Development in Ireland. Cornwall: Ashgate.  
O'Connor, D (2008) 'Policies for Farming for Health - Partners or Enemies?' In: Joost Dessein (eds). Farming for Health. Ghent: ILVO.  
Dr Colm O'Donnell
Fagan, C., O'Donnell C.P. and Cullen, P.J. (2009) 'Monitoring and control of mixing operations' In: Cullen, P.J (eds). Food Mixing: Principles and Applications. England: Blackwell.  
Cullen, P.J., and O'Donnell C.P. (2009) 'Mixing in the food procesing industry: trends and challenges' In: Cullen, P.J (eds). Food Mixing: Principles and Applications. England: Blackwell.  
Muthukumarappan, K.,O'Donnell, C.P.,Cullen, P.J. (2009) 'Ozone treatment of food materials, pp 263 - 280' In: S. Jun, J. Irudayaraj (eds). Food Processing Operations Modeling: Design and Analysis, Second Edition. New York, USA: CRC Press.  
Fagan, C.C., O'Donnell, C.P., Rudzik, L. and Wust, E. (2008) 'Milk and dairy products, pp 241 - 273' In: Infrared Spectroscopy for Food Quality Analysis and Control. San Diego, California, USA: Elsevier. Available Online  
Dr Karina Pierce
Begley, N., K. Pierce and F. Buckley (2009) 'Milk production, udder health, body condition score and fertility performance of Holstein-Friesian, Norwegian Red and Norwegian Red×Holstein-Friesian cows on Irish dairy farms' In: Marija Klopcic, Reinhard Reents, Jan Philipsson and Abele Kuipers (eds). Breeding for robustness in cattle. EAAP publication no. 126: Wageningen Academic Publishers.  
Dr Gordon Purvis
Sheridan, H., Purvis, G., O'Donovan, G. (2009) 'The ecological values and functions of grassland field margins' In: Schroder, H.G (eds). Grasslands: Ecology, Management and Restoration. USA: Nova publishers.  
Professor Da-Wen Sun
T. Norton and Da-Wen Sun (2009) 'Computational Fluid Dynamics in Thermal Processing' In: R. Simpson (eds). Engineering Aspects of Thermal Processing. USA: CRC Press / Taylor & Francis, Boca Raton, Florida.  
Du, C.J., and Sun, Da-Wen (2008) 'Quality Measurement of Cooked Meats' In: Da-Wen Sun (eds). Computer Vision Technology for Food Quality Evaluation. San Diego, California, USA: Academic Press / Elsevier.  
Du, C.J. and Sun, Da-Wen (2008) 'Quality Evaluation of Pizzas' In: Da-Wen Sun (eds). Computer Vision Technology for Food Quality Evaluation. San Diego, California, USA: Academic Press / Elsevier.  
Zheng, C.X. and Sun, Da-Wen (2008) 'Object Measurement Methods' In: Da-Wen Sun (eds). Computer Vision Technology for Food Quality Evaluation. San Diego, California, USA: Academic Press / Elsevier.  
Zheng, L.Y., Sun, Da-Wen and Tan, J. (2008) 'Quality Evaluation of Meat Cuts' In: Da-Wen Sun (eds). Computer Vision Technology for Food Quality Evaluation. San Diego, California, USA: Academic Press / Elsevier.  
Du, C.J. and Sun, Da-Wen (2008) 'Object Classification Methods' In: Da-Wen Sun (eds). Computer Vision Technology for Food Quality Evaluation. San Diego, California, USA: Academic Press / Elsevier.  
Zheng, C.X., and Sun, Da-Wen (2008) 'Image Segmentation Techniques' In: Da-Wen Sun (eds). Computer Vision Technology for Food Quality Evaluation. San Diego, California, USA: Academic Press / Elsevier.  

Dr Helen Sheridan

Sheridan, H., Purvis, G., O' Donovan, G (2009) 'The Ecological Values and Functions of Grassland Field Margin Habitats' In: Schröder, H.G (eds). Grasslands: Ecology, Management and Restoration. USA: Nova Science Publishers, INC.
Dr Paul Whyte
O'Mahony, M., Fanning, S., Whyte, P. (2009) 'The safety of raw liquid milk' In: Tamime, A.Y (eds). Milk Processing and Quality Management. Oxford, UK: Wiley-Blackwell.  
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Books Edited
Dr Enda Cummins
Cummins, E. and Curran, T (Ed.). (2009) Biosystems Engineering Research Review 14. Dublin, Ireland: UCD.  
Dr Tom Curran
Cummins, E. and Curran, T (Ed.). (2009) Biosystems Engineering Research Review, 14. Dublin: University College Dublin.  
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Peer Reviewed Journals
Dr Gashaw Ayalew Gobezie
Corkery. G.P., Gonzales-Barron, U., Ayalew, G., Ward, S. and K. McDonnell (2009) 'A preliminary investigation of avian comb as a potential biometric marker for identification of poultry'. Transactions of the Asabe, 52 (3):991-998.  
Gashaw Ayalew, Nicholas M. Holden, Shane M. Ward (2009) 'Ranking of risk of injury from glass contaminants using Fourier shape measures of fragment outlines'. Biosystems Engineering, 102 (3):265-273.  
Ayalew, G. Holden, N. and Ward, S. (2008) 'Identification of high-injury-risk glass contaminants using simple shape measures of fragment outlines'. Biosystems Engineering, 101 :145-151. Available Online  
Dr Bojlul Bahar
Schmidt O, Bahar B, Moloney AP, Monahan FJ, Harrison SM, Zazzo A, Scrimgeour CM, Begley IS, (2009) 'Turnover of carbon, nitrogen, and sulfur in bovine longissimus dorsi and psoas major muscles: Implications for isotopic authentication of meat'. Journal of Animal Science, 87 (3):905-913.  
Sweeney T, Bahar B, (2008) 'Mapping of the transcription start site (TSS) and identification of SNPs in the bovine neuropeptide Y (NPY) gene'. Gene, 9 .  
Professor Alan Baird
Winter DC, Hogan AM, Collins D, Baird AW, (2009) 'Estrogen and gastrointestinal malignancy'. Molecular and cellular endocrinology, 1-2 (NA):19-24.  
Winter DC, Hogan AM, Kennelly R, Collins D, Baird AW, (2009) 'Oestrogen inhibits human colonic motility by a non-genomic cell membrane receptor-dependent mechanism'. The British Journal of Surgery, 7 (NA):817-822.  
O'Farrelly C, Nemeth E, Baird AW, (2009) 'Microanatomy of the liver immune system'. Seminars in immunopathology .  
Winter DC, Gallagher TK, Baird AW, (2009) 'Constitutive basal and stimulated human small bowel contractility is enhanced in obesity'. Annals of surgical innovation and research, (NA).  
Winter DC, Hogan AM, Gallagher TK, Rory K, Baird AW, (2009) 'Gastric applications of electrical field stimulation'. Surgical laparoscopy, endoscopy & percutaneous techniques, 2 (NA):85-89.  
Irwin JA, Ryan MT, Baird AW, Mulholland CW, (2009) 'Practical classes: a platform for deep learning? Overall context in the first-year veterinary curriculum'. Journal of veterinary medical education, 2 (NA):180-185.  
Keely SJ, Baird AW, Skelly MM, O'Donoghue DP, Barrett KE, (2008) 'Bradykinin regulates human colonic ion transport in vitro'. British journal of pharmacology, 155 (4):558-566.  
Dr Fabrice Bernard
Da Silva C, Bernard F, Bardet J-F (2009) 'Fribotic myopathy of the iliopsoas muscle in a dog'. Veterinary Comparative Orthopaedics and Traumatology, 22 (3):238-242.  
Dr Tommy Boland
O'Mara FP, Foley PA, Kenny DA, Lovett DK, Callan JJ, Boland TM, (2009) 'Effect of DL-malic acid supplementation on feed intake, methane emissions, and performance of lactating dairy cows at pasture'. Journal of Dairy Science, 92 (7):3258-3264.  
Palladino R.A., O¿ Donovan, M.A., Kennedy, E. Murphy, J.J., Boland, T.M. and Kenny D.A (2009) 'Fatty acid composition and nutritive value of twelve cultivars of perennial ryegrass'. Grass and Forage Science, 64 :219-226.  
McEvoy, M., Delaby, L., Kennedy, E. Boland, T.M. and M., O¿Donovan (2009) 'Early lactation dairy cows: Development of equations to predict intake and milk performance at grazing'. Livestock Science, 122 :214-221.  
O'Mara FP, Foley PA, Kenny DA, Callan JJ, Boland TM, (2009) 'Effect of DL-malic acid supplementation on feed intake, methane emission, and rumen fermentation in beef cattle'. JOURNAL OF ANIMAL SCIENCE, 3 (NA):1048-1057.  
O'Kiely P, Owens D, McGee M, Boland T, (2009) 'Rumen fermentation, microbial protein synthesis, and nutrient flow to the omasum in cattle offered corn silage, grass silage, or whole-crop wheat'. Journal of Animal Science, 87 (2):658-668.  
Walsh, K., O¿Kiely, P., Taweel, H.Z. McGee, M., Moloney, A.P. and Boland, T.M. (2009) 'Intake, digestibility and rumen characteristics in cattle offered whole-crop wheat or barley silages of contrasting grain to straw ratios'. Animal Feed Science and Technology, 148 :192-213.  
McEvoy, M., M. O¿Donovan, E. Kennedy, J.P. Murphy, L. Delaby and T. Boland. (2009) ' Effect of Pre-Grazing Herbage Mass and Daily Herbage Allowance on the Lactation Performance of Holstein Friesian Dairy Cows. Submitted'. Journal of Dairy Science, 92 :414-422.  
Professor Pieter Brama
Brama PA,Holopainen J, van Weeren PR, Firth EC, Helminen HJ, Hyttinen MM (2009) 'Effect of loading on the organization of the collagen fibril network in juvenile equine articular cartilage'. J Orthop Res, 27 (9):1226-34. Available Online  
Isaksson H, Tolvanen V, Finnila MA, Iivarinen J, Turunen A, Silvast TS, Tuukkanen J, Seppanen K, Arokoski JP, Brama PA, Jurvelin JS, Helminen HJ (2009) 'Long-term voluntary exercise of male mice induces more beneficial effects on cancellous and cortical bone than on the collagenous matrix'. Exp Gerontol . Available Online  
Isaksson H, Tolvanen V, Finnila MA, Iivarinen J, Tuukkanen J, Seppanen K, Arokoski JP, Brama PA, Jurvelin JS, Helminen HJ (2009) 'Physical exercise improves properties of bone and its collagen network in growing and maturing mice'. Calcif Tissue Int, 85 (3):247-56. Available Online  
Grauw de JC, Lest van de CHA, Brama PA, Rambags BPB, Weeren van PR (2009) 'In vivo effects of meloxicam on inflammatory mediators, MMP activity and cartilage biomarkers in equine joints with acute synovitis'. Equine Veterinary Journal, 41 (1).  
Brama PA, Holopainen J, van Weeren PR, Firth EC, Helminen HJ, Hyttinen MM (2009) 'Influence of exercise and joint topography on depth-related spatial distribution of proteoglycan and collagen content in immature equine articular cartilage'. Equine Veterinary Journal, 41 (6):557-563.  
Julkunen P, Harjula T, Iivarinen J, Marjanen J, Seppanen K, Narhi T, Arokoski J, Lammi MJ, Brama PA, Jurvelin JS, Helminen HJ (2009) 'Biomechanical, biochemical and structural correlations in immature and mature rabbit articular cartilage'. Osteoarthritis Cartilage . Available Online  
Brama PA, Firth EC, van Weeren PR, Tuukkanen J, Holopainen J, Helminen HJ, Hyttinen MM (2009) 'Influence of intensity and changes of physical activity on bone mineral density of immature equine subchondral bone'. Equine Veterinary Journal, 41 (6):564-571.  
Hyttinen MM, Holopainen J, van Weeren PR, Firth EC, Helminen HJ, Brama PA (2009) 'Changes in collagen fibril network organization and proteoglycan distribution in equine articular cartilage during maturation and growth'. J Anat, 215 (5):584-91. Available Online  
Holopainen JT, Brama PA, Halmesmaki E, Harjula T, Tuukkanen J, van Weeren PR, Helminen HJ, Hyttinen MM (2008) 'Changes in subchondral bone mineral density and collagen matrix organization in growing horses'. Bone, 43 (6):1108-1114.  
van Weeren PR, Firth EC, Brommer H, Hyttinen MM, Helminen HJ, Rogers CW, DeGroot J, Brama PA (2008) 'Early exercise advances the maturation of glycosaminoglycans and collagen in the extracellular matrix of articular cartilage in the horse'. Equine Veterinary Journal, 40 (2):128-135.  
Professor David Brayden
Jones, M., Mantovani, G., Ryan, S. M., Wang, X., Brayden, D. J., & Haddleton, D. M. (2009) 'Phosphine-mediated one-pot thiol-ene ¿click¿ approach to polymer¿protein conjugates'. Chemical Communications, 35 :5272-5274. Available Online  
Sayers, C.T., Mantovani, G., Ryan, S. M., Randev, R.K., Keiper, O., Leszczyszyn, O. I., Blindauer, C., Brayden, D. J., & Haddleton, D. M. (2009) 'Site-specific N-terminus conjugation of poly(mPEG1100) methacrylates to salmon calcitonin: synthesis and preliminary biological evaluation. Site-specific N-terminus conjugation of poly(mPEG1100) methacrylates to salmon calcitonin: synthesis and preliminary biological evaluation'. Soft Matter, 5 :3038-3038.  
Callanan JJ, Fletcher NF, Bexiga MG, Brayden DJ, Brankin B, Willett BJ, Hosie MJ, Jacque JM, (2009) 'Lymphocyte migration through the blood brain barrier (BBB) in feline immunodeficiency virus infection is significantly influenced by the pre-existence of virus and TNF-alpha within the CNS: studies using an in vitro feline BBB model'. Neuropathology and applied neurobiology .  
Brayden DJ, Keely S, Ryan SM, Haddleton DM, Limer A, Mantovani G, Murphy EP, Colgan SP, (2009) 'Dexamethasone-pDMAEMA polymeric conjugates reduce inflammatory biomarkers in human intestinal epithelial monolayers'. Journal of controlled release : official journal of the Controlled Release Society, 135 (1):35-43.  
Brayden DJ, Ryan SM, Wang X, Mantovani G, Sayers CT, Haddleton DM, (2009) 'Conjugation of salmon calcitonin to a combed-shaped end functionalized poly(poly(ethylene glycol) methyl ether methacrylate) yields a bioactive stable conjugate'. Journal of controlled release : official journal of the Controlled Release Society, 135 (1):51-59.  
Brayden DJ, Feighery LM, Smith P, O'Mahony L, Fallon PG, (2008) 'Effects of Lactobacillus salivarius 433118 on intestinal inflammation, immunity status and in vitro colon function in two mouse models of inflammatory bowel disease'. Digestive diseases and sciences, 53 (9):2495-2506.  
Dr Lorraine Brennan
Brennan L, (2008) 'Session 2: Personalised nutrition. Metabolomic applications in nutritional research'. The Proceedings of the Nutrition Society, 67 (4):404-408.  
4. Baccini M, Bachmaier EM, Biggeri A, Boekschoten MV, Bouwman FG, Brennan L, Caesar R, Cinti S, Coort SL, Crosley K, Daniel H, Drevon CA, Duthie S, Eijssen L, Elliott RM, van Erk M, Evelo C, Gibney M, Heim C, Horgan GW, Johnson IT, Kelder T, Kleemann R, Kooistra T, van Iersel MP, Mariman EC, Mayer C, McLoughlin G, Müller M, Mulholland F, van Ommen B, Polley AC, Pujos-Guillot E, Rubio-Aliaga I, Roche HM, de Roos B, Sailer M, Tonini G, Williams LM, de Wit N; For the NuGO PPS Team. (2008) 'The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation'. Genes & Nutrition, 3 .  
Turner DL, PaixaÌ¿o VB, Salgueiro CA, Brennan L, Reid GA, Chapman SK, (2008) 'The Solution Structure of a Tetraheme Cytochrome from Shewanella frigidimarina Reveals a Novel Family Structural Motif'. Biochemistry .  
Ms Sheila Brennan
Mooney CT, Pinilla M, Shiel RE, Brennan SF, McAllister H, (2009) 'Quantitative thyroid scintigraphy in greyhounds suspected of primary hypothyroidism'. Veterinary radiology & ultrasound : the official journal of the American College of Veterinary Radiology and the International Veterinary Radiology Association, 2 (NA):224-229.  
L Traon G, Brennan SF, Burgaud S, Daminet S, Gommeren K, Horspool LJ, Rosenberg D, Mooney CT. (2009) 'Clinical evaluation of a novel liquid formation of L-Thyroxine for once daily treatment of dogs with hypothyroidism'. Journal of Veterinary Internal Medicine .  
Professor Francis Butler
HadiNezhad, M.,Butler, F. (2009) 'Association of Glutenin Subunit Composition and Dough Rheological Characteristics with Cookie Baking Properties of Soft Wheat Cultivars'. Cereal Chemistry, 86 (3):339-349. Available Online  
Prendergast, D. M.,Duggan, S. J.,Gonzales-Barron, U.,Fanning, S.,Butler, F.,Cormican, M.,Duffy, G. (2009) 'Prevalence, numbers and characteristics of Salmonella spp. on Irish retail pork'. International Journal of Food Microbiology, 131 (2-3):233-239. Available Online  
Patras, A.,Tiwari, B. K.,Brunton, N. P.,Butler, F. (2009) 'Modelling the effect of different sterilisation treatments on antioxidant activity and colour of carrot slices during storage'. Food Chemistry, 114 (2):484-491. Available Online  
HadiNezhad, M.,Butler, F. (2009) 'Effect of flour type and dough rheological properties on cookie spread measured dynamically during baking'. Journal of Cereal Science, 49 (2):178-183. Available Online  
Mc Carthy, U.,Ayalew, G.,Butler, F.,McDonnell, K.,Ward, S. (2009) 'The Effects of Item Composition, Tag Inlay Design, Reader Antenna Polarization, Power and Transponder Orientation on the Dynamic Coupling Efficiency of Backscatter Ultra-High Frequency Radio Frequency Identification'. Packaging Technology and Science, 22 (4):241-248. Available Online  
Patras, A.,Brunton, N. P.,Da Pieve, S.,Butler, F. (2009) 'Impact of high pressure processing on total antioxidant activity, phenolic, ascorbic acid, anthocyanin content and colour of strawberry and blackberry purees'. Innovative Food Science & Emerging Technologies, 10 (3):308-313. Available Online  
Brandon, K.,Beggan, M.,Allen, P.,Butler, F. (2009) 'The performance of several oxygen scavengers in varying oxygen environments at refrigerated temperatures: implications for low-oxygen modified atmosphere packaging of meat'. International Journal of Food Science and Technology, 44 (1):188-196. Available Online  
Patras, A.,Brunton, N.,Da Pieve, S.,Butler, F.,Downey, G. (2009) 'Effect of thermal and high pressure processing on antioxidant activity and instrumental colour of tomato and carrot purees'. Innovative Food Science & Emerging Technologies, 10 (1):16-22. Available Online  
Shanahan, C.,Kernan, B.,Ayalew, G.,McDonnell, K.,Butler, F.,Ward, S. (2009) 'A framework for beef traceability from farm to slaughter using global standards: An Irish perspective'. Computers and Electronics in Agriculture, 66 (1):62-69. Available Online  
Brunton, N. Gormley, R. Sinn, M. Butler, F. Cummins, E. O'Keeffe, M. (2009) 'Effect of pre-treatments, frying temperature and oven re-heating on the acrylamide content and quality characteristics of french fries from Rooster potato tubers'. Food Chemistry, 3 :76-81.  
Brandon, K. Beggan, M. Allen, P. Butler, F. (2009) 'The performance of several oxygen scavengers in varying oxygen environments at refrigerated temperatures: implications for low-oxygen modified atmosphere packaging of meat'. International Journal of Food Science and Technology, 44 :188-196.  
Gonzales Barron, U., Butler, F., McDonnell, K., and Ward, S. (2009) 'The end of the identity crisis? Advances in biometrics markers for animal identification'. Irish Veterinary Journal, 63 (3):204-208.  
Gonzales Barron, U., Soumpasis, I., Butler, F., and Duffy, G. (2009) 'An appraisal of the use of meat juice serology monitoring data for estimating prevalence of caecal Salmonella carriage of pigs at slaughter by means of herd-level and animal-level simulation'. Journal of Food Protection, 72 (2):286-294.  
Prendergast, D. M.,Duggan, S. J.,Fanning, S.,Cormican, M.,Gonzales-Barron, U.,Butler, F.,Duffy, G. (2008) 'Prevalence and numbers of Salmonella spp. and Enterobacteriaceae on pork cuts in abattoirs in the Republic of Ireland'. Journal of Applied Microbiology, 105 (4):1209-1219. Available Online  
Stojceska, V.,Butler, F. (2008) 'Digitization of farinogram plots and estimation of mixing stability'. Journal of Cereal Science, 48 (3):729-733. Available Online  
Professor Sean Callanan
Callanan JJ, Nolan CM, O'Sullivan FM, Brabazon DC, (2009) 'Genomic imprinting in Canis familiaris'. Reproduction in Domestic Animals, 44 Suppl 2 :16-21.  
Mally A, Sieber M, Hoffmann D, Adler M, Vaidya VS, Clement M, Bonventre JV, Zidek N, Rached E, Amberg A, Callanan JJ, Dekant W, (2009) 'Comparative analysis of novel noninvasive renal biomarkers and metabonomic changes in a rat model of gentamicin nephrotoxicity'. Toxicological sciences : an official journal of the Society of Toxicology, 109 (2):336-349.  
O'Farrelly C, Chapwanya A, Meade KG, Doherty ML, Callanan JJ, Mee JF, (2009) 'Histopathological and molecular evaluation of Holstein-Friesian cows postpartum: toward an improved understanding of uterine innate immunity'. Theriogenology, 71 (9):1396-1407.  
O'Farrelly C, Shaughnessy RG, Meade KG, Cahalane S, Allan B, Reiman C, Callanan JJ, (2009) 'Innate immune gene expression differentiates the early avian intestinal response between Salmonella and Campylobacter'. Veterinary Immunology and Immunopathology .  
Callanan JJ, Fletcher NF, Bexiga MG, Brayden DJ, Brankin B, Willett BJ, Hosie MJ, Jacque JM, (2009) 'Lymphocyte migration through the blood brain barrier (BBB) in feline immunodeficiency virus infection is significantly influenced by the pre-existence of virus and TNF-alpha within the CNS: studies using an in vitro feline BBB model'. Neuropathology and applied neurobiology .  
McLean WH, Fallon PG, Sasaki T, Sandilands A, Campbell LE, Saunders SP, Mangan NE, Callanan JJ, Kawasaki H, Shiohama A, Kubo A, Sundberg JP, Presland RB, Fleckman P, Shimizu N, Kudoh J, Irvine AD, Amagai M, (2009) 'A homozygous frameshift mutation in the mouse Flg gene facilitates enhanced percutaneous allergen priming'. Nature Genetics, 41 (5):602-608.  
Duggan V, Bryan J, Puggioni A, McAllister H, Callanan J, Katz L, (2009) 'Thrombosis of the pulmonary artery in a yearling thoroughbred colt'. Journal of Veterinary Internal Medicine, 23 (1):215-219.  
Nally JE, Monahan AM, Callanan JJ, (2008) 'Proteomic analysis of Leptospira interrogans shed in urine of chronically infected hosts'. Infection and Immunity, 76 (11):4952-4958.  
Gallagher WM, Mulrane L, Rexhepaj E, Penney S, Callanan JJ, (2008) 'Automated image analysis in histopathology: a valuable tool in medical diagnostics'. EXPERT REV MOL DIAGN, 8 (6):707-725.  
Dr Deirdre Campion
Carey MF, Fanning RA, Campion DP, Collins CB, Keely S, Briggs LP, O'Connor JJ, (2008) 'A comparison of the inhibitory effects of bupivacaine and levobupivacaine on isolated human pregnant myometrium contractility'. Anesthesia and Analgesia, 107 (4):1303-1307.  
Professor Stephen Carrington
Innes AL, Carrington SD, Thornton DJ, Kirkham S, Rousseau K, Dougherty RH, Raymond WW, Caughey GH, Muller SJ, Fahy JV. (2009) 'Ex vivo sputum analysis reveals impairment of protease-dependent mucus degradation by plasma proteins in acute asthma'. American journal of respiratory and critical care medicine, 180 (3):203-210.  
Dr John Connolly
Connolly, J. et al. (2009) 'Using MODIS derived fPAR with ground based flux tower measurements to derive the light use efficiency for two Canadian peatlands'. Biogeosciences, 6 :225-234. Available Online  
Professor Mark Crowe
Cavestany D. Viñoles C, Crowe MA, La Manna A and Mendoza A (2009) 'Effect of prepartum diet on postpartum ovarian activity in Holstein cows in a pasture-based dairy system'. Animal Reproduction Science, 114 :1-13.  
Piebes AHG, van de Griend B, Rijnders MJW, de Vries IJR, van der Weijden GC, Crowe MA and Gruys E (2009) 'Subacute ruminal acidosis, claw problems and infertility in (high producing) milk cows (article in Dutch)'. Tijdschr Diergeneeskd, 134 :486-490.  

Crowe MA, Lane EA, Sweeney T, Ryan M, Roche JF, (2009) 'Relationship between serum gonadotropins and pituitary immunoreactive gonadotropins and steroid receptors during the first FSH increase of the estrous cycle and following steroid treatment in heifers'. Animal Reproduction Science, 1-2 (NA):66-82.  
Crowe MA, Beltman ME, Lonergan P, Diskin MG, Roche JF, (2009) 'Effect of progesterone supplementation in the first week post conception on embryo survival in beef heifers'. Theriogenology, 71 (7):1173-1179.  
MA Crowe (2008) 'Resumpyion of ovarian cycliclty in post-partum beef and dairy cows'. Reproduction in Domestic Animals, 43 (Suppl. 5):20-28.  
Dr Enda Cummins
Fontana, M., E. Cummins, S. Buiattic and A. Sensidonic (2009) ' Quantification of uncertainty using Bayesian and bootstrap models to simulate the impact of nitrogen fertilisation on beta-glucan levels in barley'. Journal of the Science of Food and Agriculture, 89 (11):1890-1896.  
Brunton, N., R. Gormley, M. Sinn, F. Butler, E. Cummins and M O'Keefe (2009) 'Effect of Pre-Treatments, Frying Temperature and Oven Re-Heating on the Acrylamide Content and Quality Characteristics of French Fries from Rooster Potato Tubers'. Food, 3 (2):76-81.  
Tiwari, U. and Cummins, E. (2009) 'Factors influencing β-glucan levels and molecular weight in cereal-based products'. Cereal Chemistry, 86 (3):290-301.  
Coffey R., Cummins E. and Ward, S. (2009) 'Exposure Assessment of mycotoxins in dairy milk'. Food Control, 20 (3):239-249.  
Tiwari, U. and Cummins, E. (2008) 'A predictive model of the effects of genotypic, pre- and postharvest stages on barley β-glucan levels'. Journal of the Science of Food and Agriculture, 88 (13):2277-2287.  
Mr Florent David
Bryan J, David F, Duggan V. (2009) 'Investigation of acute colic in the adult horse'. Irish Veterinary Journal, 62 (8):541-547.  
Lavoie JP, Thompson D, Hamilton E, Debrue M, David F, Hickey G. (2008) 'Effects of a MAPK p38 inhibitor on lung function and airway inflammation in equine recurrent airway obstruction'. Equine Veterinary Journal, 40 (6):577-583.  
Dr Theo De Waal
de Waal T, Relf V, Good B, McCarthy E, (2009) 'Evidence of Fasciola hepatica infection in Radix peregra and a mollusc of the family Succineidae in Ireland'. Veterinary Parasitology, 163 (1-2):152-155.  
Mulcahy G, Zintl A, Proctor AF, Read C, Dewaal T, Shanaghy N, Fanning S, (2009) 'The prevalence of Cryptosporidium species and subtypes in human faecal samples in Ireland'. Epidemiology and infection, 137 (2):270-277.  
Dr Adriana Edith Delgado
Norton, T.; Delgado, A.; Hogan, E.; Grace, P. and Sun, D.-W. (2009) 'Simulation of high pressure freezing processes by enthalpy method'. Journal of Food Engineering, 91 (2):260-268.  
Delgado, A.E.; Zheng, L. and Sun, D.-W. (2009) 'Influence of Ultrasound on Freezing Rate of Immersion-frozen Apples'. Food and Bioprocess Technology, 2 (3):263-270.  
Dr Ger Jason Devlin
Rory Deverell, Kevin McDonnell, Shane Ward and Ger Devlin (2009) 'An economic assessment of potential ethanol production pathways in Ireland'. Energy Policy .  
Rory Deverell, Kevin McDonnell, Shane Ward and Ger Devlin (2009) 'Potential Bioethanol Feedstock Availability Around Nine Locations in the Republic of Ireland'. Energies, 2 (1):120-133. Available Online  
Devlin, G. J., K. McDONNELL (2009) 'Performance accuracy of real-time GPS asset tracking systems for timber haulage trucks travelling on both internal forest road network and public road network'. International Journal of Forest Engineering, 20 (1):45-49.  
Professor Michael Liam Doherty
O'Farrelly C, Chapwanya A, Meade KG, Doherty ML, Callanan JJ, Mee JF, (2009) 'Histopathological and molecular evaluation of Holstein-Friesian cows postpartum: toward an improved understanding of uterine innate immunity'. Theriogenology, 9 (NA):1396-1407.  
Nally JE, Sayers G, Marques PX, Evans NJ, O'Grady L, Doherty ML, Carter SD, (2009) 'Identification of spirochetes associated with contagious ovine digital dermatitis'. JOURNAL OF CLINICAL MICROBIOLOGY, 4 (NA):1199-1201.  
Nally JE, Sayers G, Marques PX, Evans NJ, O'Grady L, Doherty ML, Carter SD, (2009) 'Identification of spirochetes associated with contagious ovine digital dermatitis'. JOURNAL OF CLINICAL MICROBIOLOGY, 4 (NA):1199-1201.  
Dr Owen Doyle
Doyle, O.P.E., Kelleher, Y. and O'Connor, A. (2009) 'Developing Human Capital through Horticulture'. Acta Horticulturae, 817 (1):91-97.  
Doyle, O.P.E. and Kelleher, Y. (2009) 'Re-Discovering Horticulture: An Exploration from Plant Production to Social Capital'. Acta Horticulturae, 817 (1):209-215.  
Barry, J. Grant, J. Doyle, O. and Grogan, H. (2008) 'Partial substitution of peat with spent mushroom substrate in peat-based blends. '. Science and Cultivation of Edible Fungi, XVIII :388-410.  
Dr Elaine Duggan
Farag, K.W.; Duggan, E.; Morgan, D.J.; Cronin, D.A.; Lyng, J.G. (2009) 'A comparison of conventional and radio frequency defrosting of lean beef meats: effects on water binding characteristics'. Meat Science, 83 (2):278-284.  
Arimi, J.M., Duggan, E., O'Riordan, E.D., O'Sullivan, M., Lyng, J.G. (2008) 'Microwave expansion of imitation cheese containing resistant starch'. Journal of Food Engineering, 88 (2):254-262.  
Dr Vivienne Duggan
Collins J, Hanlon A, More SJ, Wall PG, Duggan V (2009) 'Policy Delphi with vignette methodology as a tool to evaluate the perception of equine welfare'. The Veterinary Journal, 1 (NA):63-69.  
Collins, J., Hanlon, A., More, S.J. and Duggan, V. (2008) 'The structure and regulation of the Irish equine industry: links to consideration of equine welfare'. Irish Veterinary Journal, 61 (11):746-756. Available Online  
Professor Alexander Evans
NA Smith, FM Mc Auliffe, K Quinn, P Lonergan, ACO Evans. (2009) 'Transient high glycaemic intake in the last trimester of pregnancy increases offspring birth weight and postnatal growth rate in sheep'. British Journal of Obstetrics and Gynaecology, 116 (7):975-983.  
F Jimenez-Krassel, JK Folger, JLH Ireland, GW Smith, X Hou, JS Davis, P Lonergan, ACO Evans, and JJ Ireland (2009) 'Evidence that high variation in ovarian reserves of healthy young adults has a negative impact on the corpus luteum and endometrium during reproductive cycles of single-ovulating species'. Biology of Reproduction, 80 (6):1272-1281.  
JJ Ireland, AE Zielak, F Jimenez-Krassel, J Folger, A Bettegowda, D Scheetz, S Walsh, F Mossa, PG Knight, GW Smith, P Lonergan, ACO Evans (2009) 'Variation in the Ovarian Reserve is linked to Alterations in Intrafollicular Estradiol Production and Ovarian Biomarkers of Follicular Differentiation and Oocyte Quality in Cattle'. Biology of Reproduction, 80 (5):954-964.  
JLH Ireland, D Scheetz, F Jimenez-Krassel, AP Themmen, F Ward, P Lonergan, GW Smith, GI Perez, ACO Evans, JJ Ireland. (2008) 'Antral follicle count reliably predicts number of morphologically healthy oocytes and follicles in ovaries of young adult cattle'. Biology of Reproduction, 79 (6):1219-1225.  
PAR Hawkens, ACO Evans and AP Beard. (2008) 'Prior exposure of maiden ewes to rams enhances their behavioural interactions with rams but is not a pre-requisite to their endocrine response to the ram effect'. Animal Reproduction Science, 108 :13-21.  
de Feu, M.A., Patton, J., Evans, A.C.O., Lonergan, P., Butler, S.T. (2008) 'The effect of strain of Holstein-Friesian cow on size of ovarian structures, periovulatory circulating steroid concentrations, and embryo quality following superovulation'. Theriogenology, 70 :1101-1110.  
KE Ryan, C Glister, P Lonergan, F Martin, PG Knight, ACO Evans (2008) 'Functional significance of the signal transduction pathways Akt and Erk in ovarian follicles: in vivo and in vitro studies in cattle and sheep'. Journal of Ovarian Research, 1 (2):1-13.  
MA de Feu, J Patton, ACO Evans, P Lonergan, ST Butler. (2008) 'The effect of strain of Holstein-Fresian cow on size of ovarian structures, periovulatory circulating steroid concentrations, and embryo quality following superovulation'. Theriogenology, 70 (7):1101-1110.  
Dr Colette Fagan
Mateo, M.J., O'Callaghan, D.J., Everard, C. D., O'Donnell, C.P., Fagan, C.C., Castillo, M., Payne, F.A. (2009) 'Effect of Milk Fat Concentration and Gel Firmness on Syneresis during Curd Stirring in Cheese-making'. International Dairy Journal .  
De Marchi, M., Fagan, C., O'Donnell, C.P., Cecchinato, A., Dal Zotto, R., Cassandro, M., Penasa, M., Bittante G. (2009) 'Prediction of Coagulation Properties, Titratable Acidity and pH of Bovine Milk using Mid-Infrared Spectroscopy'. Journal of Dairy Science, 92 :423-432.  
Dr Alan Fahey
Sorrells, A.D., K. Corcoran-Gomez, K.A. Eckert, A.G. Fahey, B.L. Hoots, L.B. Charleston, J.S. Charleston, C.R. Roberts, and H. Markowitz (2009) 'Effects of Environmental Enrichment on the Amyotrophic Lateral Scelrosis Model'. Laboratory Animals, 43 (2):182-190.  
Begley, N., F. Buckley, K.M. Pierce, A.G. Fahey, and B.A. Mallard (2009) 'Differences in udder health and immune response traits of Holstein-Friesians, Norwegian Reds, and their crosses in second lactation'. Journal of Dairy Science, 92 (2):749-757.  
R.L. Dennis, A.G. Fahey, and H.W. Cheng (2009) 'Infrared beak treatment method compared with conventional hot-blade trimming in laying hens'. Poultry Science, 88 (1):38-43.  
Fahey, A.G., and H.W. Cheng (2008) 'Effects of Social Disruption on Physical Parameters, Corticosterone, and Immune System in two Genetic Lines of White Leghorn Layers'. Poultry Science, 87 (10):1947-1954.  
Professor Séamus Fanning
Acke, E., McGill, K., Quinn, T., Jones, B., Fanning, S. and Whyte, P (2009) 'Prevalence of Campylobacter species in household pets in Ireland'. Foodborne Pathogens and Disease, (6):705-710.  
Dolan, A., Burgess, C., Barry, T.B., Fanning, S. and Duffy, G (2009) 'A novel quantitative reverse-transcription PCR (qRT-PCR) for the enumeration of total bacteria, using meat microflora as a model'. Journal of Microbiological Methods, (77):1-7.  
Acke, E., McGill, K., Golden, O., Jones, B., Fanning, S. and Whyte, P (2009) 'Prevalence of thermophilic Campylobacter species in household cats and dogs in Ireland'. The Veterinary Record, (10):44-47.  
O¿Brien, S., Healy, B., Negredo, C., Anderson, W., Fanning, S. and Iversen, C (2009) 'Cronobacter species (Enterobacter sakazakii) in follow-on infant formulas'. Letters in Applied Microbiology, (48):536-541.  
Spengler, G., Martins, A., Schelz, Z., Rodrigues, L., Aagaard, L., Martins, M, Santos-Costa, S., Couto, I., Viveros, M., Fanning, S., Kristiansen, J.E., Molnar, J. and Amaral, L (2009) 'Characterisation of intrinsic efflux activity of Enterococcus faecalis ATCC29212 by a semi-automated ethidium bromide method'. In Vivo, (23):81-88.  
O¿Regan, E. Quinn, T, McCusker, M., Pagès, J-M., Piddock, L.V.P. and Fanning, S (2009) 'Multiple regulatory pathways associated with high-level ciprofloxacin and multi-drug resistance in Salmonella enterica serovar Enterotodis ¿involvement of ramA and other global regulators'. Antimicrobial Agents and Chemotherapy, (53):1080-1087.  
El-Sharoud, W., O¿Brien, S., Negredo, C., Iversen, C., Fanning, S. and Healy, B (2009) 'Isolation and characterisation of Cronobacter recovered from dried milk and related products'. BMC microbiology, (2):24-24.  
Lenahan, M., O¿Brien, S., Byrne, C., Ryan, M., Kennedy, C.-A., McNamara, E., Fanning, S., Sheridan, J. and Sweeney, T (2009) 'Molecular characterisation of Irish E. coli O157:H7 isolates of human, bovine, ovine and porcine origin'. Journal of Applied Microbiology, (75):3146-3152.  
Toomey, N., Monaghan, A., Fanning, S. and Bolton, D (2009) 'Transfer of antibiotic resistatnce markers between lactic acid bacteria in model rumen and plant environments'. Applied and Environmental Microbiology, (75):3146-3152.  
Toomey, N., Monaghan, A., Fanning, S. and Bolton, D (2009) '. Assessment of antimicrobial resistance transfer between Lactic Acid Bacteria and food-borne pathogens, including Listeria spp., Salmonella spp., Staphylococcus aureus, and Escherichia coli, using in vitro methods and mating in a food matrix'. Foodborne Pathog Dis, (6):925-933.  
Almedia, C., Azevedo, N.F., Iversen, C., Fanning, S., Keevil, C.W. and Vieira, M.J (2009) 'Development and application of a novel peptide nucleic acid probe for the specific detection of Cronobacter in powdered infant formula'. Applied Environmental Microbiology, (75).  
Prendergast, D.M., Duggan, S.J., Gonzales-Barron, U., Fanning, S., Butler, F., Cormican, M. and Duffy, G (2009) 'Prevalence, numbers and characteristics of Salmonella spp on Irish retail pork'. International Journal of Food Microbiology, (31):233-239.  
Patriarchi, A., Maunsell, B., O¿Mahony, E., Fox, Á.; Fanning, S., Buckley, J. and Bolton, D (2009) 'Prevalence of Campylobacter in s subset of intensive poultry flocks in Ireland'. Letters in Applied Microbiology, (49):305-310.  
Toomey, N., Monaghan, A., Fanning, S. and Bolton, D (2009) 'Assessment of horizontal gene transfer in lactic acid bacteria-a comparison of mating techniques with a view to optimising conjugation conditions'. Journal of Microbiological Methods, (77):23-28.  
Martins, A., Spengler, G., Rodrigues, L., Viveiros, M., Ramos, J., Martins, M., Couto, I., Fanning, S., Pagés, J.-M., Bolla, J.-M., Molnar, J. and Amaral, L. (2009) 'pH modulation of efflux pump activity of multi-drug resistant E. coli: relationship to the protection of the organism during its passage and eventual colonization of the colon'. PLoS ONE .  
Fanning S, O'Regan E, McCabe E, Burgess C, McGuinness S, Barry T, Duffy G, Whyte P, (2008) 'Development of a real-time multiplex PCR assay for the detection of multiple Salmonella serotypes in chicken samples'. BMC microbiology, (NA).  
Dr Mary Forrest
Forrest, Mary and Moore, Tom (2008) 'Eucalyptus gunnii: A possible source of bioenergy?'. Biomass and Bioenergy, 32 (10):978-980.  
Professor Mike Gibney
Gibney MJ, Joyce T, Wallace AJ, McCarthy SN, (2008) 'Intakes of total fat, saturated, monounsaturated and polyunsaturated fatty acids in Irish children, teenagers and adults'. Public Health Nutrition, :1-10.  

Dr Margherita Gioria 

Gioria, M. & Osborne, B. (2009) 'The impact of Gunnera tinctoria Molina (Mirbel) on soil seed bank communities'. Journal of Plant Ecology.
Gioria, M. & Osborne, B. (2009) 'Assessing the impact of plant invasions on soil seed bank communities: use of univariate and multivariate statistical approaches'. Journal of Vegetation Science, 20 (3):547-556.

Dr Ursula Andrea Gonzales-Barron
Corkery, G., Gonzales Barron, U., Ayalew, G., Ward, S., and McDonnell, K (2009) 'A preliminary investigation of avian comb as a potential biometric marker for identification of poultry'. Transactions of the Asabe, 52 (3):991-998.  
Gonzales Barron, U., Butler, F., McDonnell, K., and Ward, S. (2009) 'The end of the identity crisis? Advances in biometrics markers for animal identification'. Irish Veterinary Journal, 63 (3):204-208.  
Gonzales Barron, U., Soumpasis, I., Butler, F., and Duffy, G. (2009) 'An appraisal of the use of meat juice serology monitoring data for estimating prevalence of caecal Salmonella carriage of pigs at slaughter by means of herd-level and animal-level simulation'. Journal of Food Protection, 72 (2):286-294.  
Professor Stephen Gordon
Vordermeier M, Gordon SV, Hewinson AR. (2009) 'Antigen Mining to Define Mycobacterium bovis Antigens for the Differential Diagnosis of Vaccinated and Infected Animals: A VLA Perspective'. Transboundary and emerging diseases, 56 (6-7):240-247.  
Santangelo Mde L, Klepp L, Nunez-GarcÃia J, Blanco FC, Soria M, Garcia-Pelayo Mdel C, Bianco MV, Cataldi AA, Golby P, Jackson M, Gordon SV, Bigi F. (2009) 'Mce3R, a TetR-type transcriptional repressor, controls the expression of a regulon involved in lipid metabolism in Mycobacterium tuberculosis'. Microbiology (Reading, England), 155 (Pt 7):2245-2255.  
Smith NH, Hewinson RG, Kremer K, Brosch R, Gordon SV. (2009) 'Myths and misconceptions: the origin and evolution of Mycobacterium tuberculosis'. Nature reviews. Microbiology, 7 (7):537-544.  
Garcia Pelayo MC, Uplekar S, Keniry A, Mendoza Lopez P, Garnier T, Nunez Garcia J, Boschiroli L, Zhou X, Parkhill J, Smith N, Hewinson RG, Cole ST, Gordon SV (2009) 'A comprehensive survey of single nucleotide polymorphisms (SNPs) across Mycobacterium bovis strains and M. bovis BCG vaccine strains refines the genealogy and defines a minimal set of SNPs that separate virulent M. bovis strains and M. bovis BCG strains'. Infection and Immunity, 77 (5):2230-2238.  
Gordon SV, Bottai D, Simeone R, Stinear TP, Brosch R. (2009) 'Pathogenicity in the tubercle bacillus: molecular and evolutionary determinants'. BioEssays : news and reviews in molecular, cellular and developmental biology .  
Berg S, Firdessa R, Habtamu M, Gadisa E, Mengistu A, Yamuah L, Ameni G, Vordermeier M, Robertson BD, Smith NH, Engers H, Young D, Hewinson RG, Aseffa A, Gordon SV. (2009) 'The burden of mycobacterial disease in ethiopian cattle: implications for public health'. PLoS ONE, 4 (4).  
Muller B, Hilty M, Berg S, Garcia-Pelayo MC, Dale J, Boschiroli ML, Cadmus S, Naré B, Ngandolo R, Godreuil S, Diguimbaye-Djaibé C, Kazwala R, Bonfoh B, Njanpop-Lafourcade BM, Sahraoui N, Guetarni D, Aseffa A, Mekonnen MH, Rasolofo Razanamparany V, Ramarokoto H, Djønne B, Oloya J, Machado A, Mucavele C, Skjerve E, Portaels F, Rigouts L, Michel A, Müller A, Källenius G, van Helden PD, Hewinson RG, Zinsstag J, Gordon SV, Smith NH (2009) 'African 1; An Epidemiologically Important Clonal Complex of Mycobacterium bovis Dominant in Mali, Nigeria, Cameroon and Chad'. Journal of Bacteriology .  
Ojo O, Sheehan S, Corcoran GD, Okker M, Gover K, Nikolayevsky V, Brown T, Dale J, Gordon SV, Drobniewski F, Prentice MB (2008) 'Mycobacterium bovis Strains Causing Smear-Positive Human Tuberculosis, Southwest Ireland'. Emerging infectious diseases, 14 (12):1931-1934.  
Gordon SV (2008) 'Bovine TB: stopping disease control would block all live exports'. Nature, 456 (7223).  
Wheeler PR, Brosch R, Coldham NG, Inwald JK, Hewinson RG, Gordon SV (2008) 'Functional analysis of a clonal deletion in an epidemic strain of Mycobacterium bovis reveals a role in lipid metabolism'. Microbiology (Reading, England), 154 (Pt 12):3731-3742.  
Dr Eamonn Gormley
Murphy D, Gormley E, Costello E, O'Meara D, Corner LA (2009) 'The prevalence and distribution of Mycobacterium bovis infection in European badgers (Meles meles) as determined by enhanced post mortem examination and bacteriological culture'. Research in Veterinary Science .  
Meade KG, Machugh DE, Gormley E, Park SD, Browne JA, Taraktsoglou M, O'Farrelly C, (2009) 'Gene Expression Profiling of the Host Response to Mycobacterium bovis Infection in Cattle'. Transboundary and emerging diseases, (NA).  
Corner LA, Murphy D, O'Keeffe JJ, Martin SW, Gormley E, (2009) 'An assessment of injury to European badgers (meles meles) due to capture in stopped restraints'. Journal of wildlife diseases, 45 (2):481-490.  
McCarthy G, Shiel R, O'Rourke L, Murphy D, Corner L, Costello E, Gormley E (2009) 'Bronchoalveolar lavage cytology from captive badgers'. Veterinary Clinical Pathology, 38 (3):381-387.  
Lesellier S, Corner L, Costello E, Sleeman P, Lyashchenko KP, Greenwald R, Esfandiari J, Glyn Hewinson R, Chambers M, Gormley E (2009) 'Immunological responses following experimental endobronchial infection of badgers (Meles meles) with different doses of Mycobacterium bovis'. Veterinary Immunology and Immunopathology, 127 :174-180.  
Lesellier S, Corner L, Costello E, Lyashchenko K, Greenwald R, Esfandiari J, Singh M, Hewinson RG, Chambers M, Gormley E (2009) 'Immunological responses and protective immunity in BCG vaccinated badgers following endobronchial infection with Mycobacterium bovis0   '. Vaccine, 27 (3):402-409.  
Corner LA, Costello E, Lesellier S, O'Meara D, Gormley E (2008) 'Experimental tuberculosis in the European badger (Meles meles) after endobronchial inoculation with Mycobacterium bovis: II. Progression of infection'. Research in Veterinary Science, 85 (3):481-490.  
Corner LA, Costello E, Lesellier S, O'Meara D, Gormley E, (2008) 'Vaccination of European badgers (Meles meles) with BCG by the subcutaneous and mucosal routes induces protective immunity against endobronchial challenge with Mycobacterium bovis'. Tuberculosis (Edinburgh, Scotland), 88 (6):601-609.  
Lesellier S, Corner L, Costello E, Lyashchenko K, Greenwald R, Esfandiari J, Singh M, Hewinson RG, Chambers M, Gormley E, (2008) 'Immunological responses and protective immunity in BCG vaccinated badgers following endobronchial infection with Mycobacterium bovis'. Vaccine .  
Meade KG, Gormley E, O'Farrelly C, Park SD, Costello E, Keane J, Zhao Y, MacHugh DE. (2008) 'Antigen stimulation of peripheral blood mononuclear cells from Mycobacterium bovis infected cattle yields evidence for a novel gene expression program'. BMC Genomics, 9 .  
Lesellier S, Corner L, Costello E, Sleeman P, Lyashchenko KP, Greenwald R, Esfandiari J, Glyn Hewinson R, Chambers M, Gormley E. (2008) 'Immunological responses following experimental endobronchial infection of badgers (Meles meles) with different doses of Mycobacterium bovis'. Veterinary Immunology and Immunopathology .  
Dr Aoife Gowen
Gowen, A.A., C. P. O'Donnell, M. Taghizadeh, E. Gaston, A. O'Gorman, P. J. Cullen, J. M. Frias, C. Esquerre and G. Downey (2008) 'Hyperspectral imaging for the investigation of quality deterioration in sliced mushrooms (Agaricus bisporus) during storage'. Sensing and Instrumentation for Food Quality and Safety, 2 (3):133-143.  
Dr Alison J Hanlon
O¿Driscoll, K.M., Hanlon, A., French, P. and Boyle, L.A. (2009) 'The effects of two out-wintering pad systems comparedwith free-stalls on dairy cow hoof and limb health'. Journal of Dairy Science, 76 :59-65.  
G. Olmos, L. Boyle, B. Horan, D. P. Berry, P. O¿Connor, J. F. Mee and A. Hanlon (2009) 'Effect of genetic group and feed system on locomotion score, clinical lameness and hoof disorders of pasture-based Holstein–Friesian cows'. Animal, 3 (1):96-107.  
Collins, J., Hanlon, A., More, S.J. and Duggan, V. (2008) 'The structure and regulation of the Irish equine industry: links to consideration of equine welfare'. Irish Veterinary Journal, 61 (11):746-756. Available Online  
O'Driscoll, K., Hanlon, A. and Boyle, L. (2008) 'The Effect of Out-Wintering Pad Design on the Synchrony of Dairy Cow Behavior'. Journal of Dairy Science, 91 :4651-4660.  
O'Driscoll, K., Boyle, B. French, P., Meaney, B. and Hanlon, A. (2008) 'The Effect of Out-Wintering Pad Design on Dirtiness Score, Somatic Cell Score and Mastitis Incidence in Dairy Cows'. Animal, 2 :912-920.  
Dr Yumi Hashim
Mel, M.; Abdul Rahman, A.R.; Mohamad Salleh, M.R.; Hashim, Y.Z.H-Y. (2008) 'Monoclonal antibody production: viability improvemnet of RC1 hybridoma cell in different types of bioreactor'. World Journal of Microbiology & Biotechnology, 24 :1923-1927.  
Dr Emmeline Hill
Gu J, Orr N, Park SD, Katz LM, Sulimova G, MacHugh DE, Hill EW (2009) 'A genome scan for positive selection in thoroughbred horses'. PLoS ONE, 4 (6).  
O'Gorman GM, Park SD, Hill EW, Meade KG, Coussens PM, Agaba M, Naessens J, Kemp SJ, MacHugh DE (2009) 'Transcriptional profiling of cattle infected with Trypanosoma congolense highlights gene expression signatures underlying trypanotolerance and trypanosusceptibility'. Genomics, 10 .  
Professor Nick Holden
J. P. Carroll, N. M. Holden (2009) 'Modeling the relationship between patch sprayer performance and weed distribution'. T ASABE, 52 :1051-1056.  
A. Moges, N. M. HOLDEN (2009) 'Soil Fertility in Relation to Slope Position and Agricultural Land Use: A Case Study of Umbulo Catchment in Southern Ethiopia'. Environmental Management, 42 :753-763.  
J.B. Fitzgerald, A.J. Brereton and N.M. Holden (2009) 'Assessment of the adaptation potential of grass-based dairy systems to climate change in Ireland¿The maximised production scenario'. AGRICULTURAL AND FOREST METEOROLOGY, 149 :244-255.  
Connolly, J., N. M. Holden, J. W. Seaquist, P. Lafleur, E Humphreys, B Heumann, S M. Ward and N Roulet (2009) 'Using MODIS derived 'PAR with ground based flux tower measurements to derive the light use efficiency for two Canadian peatlands'. Biogeosciences, 6 :225-234.  
Ayalew, G. Holden, N. and Ward, S. (2008) 'Identification of high-injury-risk glass contaminants using simple shape measures of fragment outlines'. Biosystems Engineering, 101 :145-151. Available Online  
Mrs Lynne Hughes
Clutton RE, Self IA, Hughes JM, Kenny DA, (2009) 'Effect of muscle injection site on preanaesthetic sedation in dogs'. Veterinary Record, 164 (11):323-326.  
Dr Jane Irwin
Reid CJ, Thompson L, Donnelly S, Deaton CM, Marlin DJ, Carrington SD, Irwin JA (2009) 'The activity and expression of chitinase in the equine lung and its activity in normal horses and animals with recurrent airway obstruction'. Research in Veterinary Science, 87 (1):20-25.  
Irwin JA, Ryan MT, Baird AW, Mulholland CW, (2009) 'Practical classes: a platform for deep learning? Overall context in the first-year veterinary curriculum'. Journal of Veterinary Medical Education, 36 (2):180-185.  
Dr Carol Iversen
C. Almeida, N. F. Azevedo, C. Iversen, S. Fanning, C. W. Keevil, M. J. Vieira (2009) 'Development and application of a novel peptide nucleic acid probe for the specific detection of Cronobacter0 genomospecies ( Enterobacter sakazakii0 ) in Powdered Infant Formula'. Applied and Environmental Microbiology, 75 :2925-2930. Available Online  
Walid M El-Sharoud, Stephen O'Brien, Carmen Negredo, Carol Iversen, Séamus Fanning and Brendan Healy. (2009) 'Characterization of Cronobacter0 recovered from dried milk and related products'. BMC microbiology, 9 . Available Online  
C. Iversen, A. Lehner, C. Fricker, K. Gschwend, R. Stephan (2009) 'Genotyping of Cronobacter0 ( Enterobacter sakazakii0 ) strains isolated from an infant formula processing plant'. Archiv für Lebensmittelhygiene, 60 (2):66-72.  
Sophie Zuber, Catherine Boissin-Delaporte, Lise Michot, Carol Iversen, Benjamin Diep, Harald Brüssow and Pieter Breeuwer (2008) 'Decreasing Enterobacter sakazakii0 ( Cronobacter0 spp.) food contamination level with bacteriophages: prospects and problems'. Microbial Biotechnology, 1 (6):532-543. Available Online  
Hassler, Ch., Nitzsche, S. Iversen, C., Zweifel, C., Stephan, R. (2008) 'Characteristics of Staphylococcus hyicus strains isolated from pig carcasses in two different slaughterhouses'. Meat Science, 80 (2):505-510. Available Online  
Dr Jean-Christophe Jacquier
Harbourne, Niamh and Jacquier, Jean Christophe and O'Riordan, Dolores (2009) 'Optimisation of the extraction and processing conditions of chamomile (Matricaria chamomilla L.) for incorporation into a beverage'. FOOD CHEMISTRY, 115 (1):15-19.  
Alexa, R. I. and Mounsey, J. S. and O'Kennedy, B. T. and Jacquier, J. C. (2009) 'Effect of milk salts on the viscosity, zeta potential, gelation and binding capacity of kappa-carrageenan'. MILCHWISSENSCHAFT-MILK SCIENCE INTERNATIONAL, 64 (4):417-421.  
Ellis, A. and Jacquier, J. C. (2009) 'Manufacture and characterisation of agarose microparticles'. JOURNAL OF FOOD ENGINEERING, 90 (2):141-145.  
Harbourne, N; Jacquier, JC; Morgan, DJ; Lyng, JG (2008) 'Determination of the degradation kinetics of anthocyanins in a model juice system using isothermal and non-isothermal methods'. FOOD CHEMISTRY, 111 (1):204-208.  
Dr Lisa Katz
Gu, J et al (2009) 'A genome scan for positive selection in Thoroughbred horses'. PLoS ONE, 4 (6).  
Katz, LM, O'Dwyer S, Pollock, PJ (2009) 'Nutritional muscular dystrophy in a four-day-old Connemara foal'. Irish Veterinary Journal, 62 (2):119-124.  
Bryan, J et al. (2009) 'Thrombosis of the pulmonary artery in a yearling thoroughbred colt'. Journal of Veterinary Internal Medicine, 23 :215-219.  

Dr Aidan M Keith  

Keith, A. M., Brooker, R. B., Osler, G. H. R., Chapman, S. J. Burslem, D. F. R. P. & Van der Wal, R. (2009) 'Strong impacts of belowground tree inputs on soil nematode trophic composition'. Soil Biology & Biochemistry, 41 :1060-1065.
Keith, A. M., Van der Wal, R., Brooker, R. B., Osler, G. H. R., Chapman, S. J. & Burslem, D. F. R. P. & Elston, D (2008) 'Increasing litter species richness reduces variability in a terrestrial decomposer system'. Ecology, 89 (9):2657-2664.

Dr David Kenny
O'Mara FP, Foley PA, Kenny DA, Callan JJ, Boland TM, (2009) 'Effect of DL-malic acid supplementation on feed intake, methane emission, and rumen fermentation in beef cattle'. Journal of Animal Science, 87 (3):1048-1057.  
Kenny DA, Waters SM, Kelly JP, O'Boyle P, Moloney AP, (2009) 'Effect of level and duration of dietary n-3 polyunsaturated fatty acid supplementation on the transcriptional regulation of Delta9-desaturase in muscle of beef cattle'. Journal of Animal Science, 87 (1):244-252.  
Kenny DA, Childs S, Carter F, Lynch CO, Sreenan JM, Lonergan P, Hennessy AA, (2008) 'Embryo yield and quality following dietary supplementation of beef heifers with n-3 polyunsaturated fatty acids (PUFA)'. Theriogenology, 70 (6):992-1003.  
Waters SM, Coyne GS, Kenny DA, Childs S, Sreenan JM, (2008) 'Dietary n-3 polyunsaturated fatty acids alter the expression of genes involved in prostaglandin biosynthesis in the bovine uterus'. Theriogenology, 70 (5):772-782.  
Kenny DA, Childs S, Hennessy AA, Sreenan JM, Wathes DC, Cheng Z, Stanton C, Diskin MG, (2008) 'Effect of level of dietary n-3 polyunsaturated fatty acid supplementation on systemic and tissue fatty acid concentrations and on selected reproductive variables in cattle'. Theriogenology, 70 (4):595-611.  
Dr James Kinsella
Jim Kinsella, Eamonn Brehony (2009) 'Are current aid strategies marginalising the already marginalised? Cases from Tanzania'. Development in Practice, 19 (1):51-60. Available Online  
Dr Finola Leonard
Scott L, McGee P, Walsh C, Fanning S, Sweeney T, Blanco J, Karczmarczyk M, Earley B, Leonard N, Sheridan JJ. (2009) 'Detection of numerous verotoxigenic E. coli serotypes, with multiple antibiotic resistance from cattle faeces and soil'. Veterinary Microbiology, 134 (3-4):288-293.  
Gutierrez M, Fanning J, Murphy A, Murray G, Griffin M, Flack A, Leonard N, Egan J. (2009) 'Salmonella in broiler flocks in the republic of Ireland'. Foodborne Pathogens and Disease, 6 (1):111-120.  
Professor Patrick Lonergan
Evans AC, McAuliffe FM, Quinn K, Lonergan P, Smith NA, (2009) 'Transient high glycaemic intake in the last trimester of pregnancy increases offspring birthweight and postnatal growth rate in sheep: a randomised control trial'. BJOG : an international journal of obstetrics and gynaecology, 116 (7):975-983.  
Evans AC, Bettegowda A, Scheetz D, Walsh S, Mossa F, Knight PG, Smith GW, Lonergan P, Ireland JJ, Zielak-Steciwko AE, Jimenez-Krassel F, Folger J, (2009) 'Variation in the ovarian reserve is linked to alterations in intrafollicular estradiol production and ovarian biomarkers of follicular differentiation and oocyte quality in cattle'. Biology of Reproduction, 80 (5):954-964.  

Crowe MA, Beltman ME, Lonergan P, Diskin MG, Roche JF, (2009) 'Effect of progesterone supplementation in the first week post conception on embryo survival in beef heifers'. Theriogenology, 71 (7):1173-1179.  
Evans AC, Ryan KE, Glister C, Lonergan P, Martin F, Knight PG, (2008) 'Functional significance of the signal transduction pathways Akt and Erk in ovarian follicles: in vitro and in vivo studies in cattle and sheep'. Journal of ovarian research, 1 (1).  
Dr Ingrid Maria Lorenz
Lorenz, I. and Lorch, A. (2009) 'D-lactic acidosis in lambs'. The Veterinary Record .  
Dr Bridget Lynch
C.J. O¿Shea, B. Lynch, M.B. Lynch, J.J. Callan and J.V. O¿Doherty (2009) 'Ammonia emissions and dry matter of separated pig manure fractions as affected by crude protein concentration and sugar beet pulp inclusion of finishing pig diets'. Agriculture, Ecosystems and Environment, 131 :154-160.  
Dr James Lyng
Riener, Joerg,Noci, Francesco,Cronin, Denis A.,Morgan, Desmond J.,Lyng, James G. (2009) 'The effect of thermosonication of milk on selected physicochemical and microstructural properties of yoghurt gels during fermentation'. Food Chemistry, 114 (3):905-911. Available Online  
Riener, J.,Noci, F.,Cronin, D. A.,Morgan, D. J.,Lyng, J. G. (2009) 'Effect of high intensity pulsed electric fields on enzymes and vitamins in bovine raw milk'. International Journal of Dairy Technology, 62 (1):1-6. Available Online  
Riener, J.,Noci, F.,Cronin, D. A.,Morgan, D. J.,Lyng, J. G. (2009) 'Combined effect of temperature and pulsed electric fields on pectin methyl esterase inactivation in red grapefruit juice (Citrus paradisi)'. European Food Research and Technology, 228 (3):373-379. Available Online  
Noci, F.,Walkling-Ribeiro, M.,Cronin, D. A.,Morgan, D. J.,Lyng, J. G. (2009) 'Effect of thermosonication, pulsed electric field and their combination on inactivation of Listeria innocua in milk'. International Dairy Journal, 19 (1):30-35. Available Online  
Riener, Joerg,Noci, Francesco,Cronin, Denis A.,Morgan, Desmond J.,Lyng, James G. (2009) 'Characterisation of volatile compounds generated in milk by high intensity ultrasound'. International Dairy Journal, 19 (4):269-272. Available Online  
Marra, F. Zell, M. Lyng,J.G. Morgan, D.J.and Cronin D.A. (2009) 'Analysis of heat transfer during ohmic processing of a solid food'. Journal of Food Engineering, 91 (1):56-63.  
Farag, K.W. Lyng, J.G. Morgan, D.J. and Cronin D.A. (2009) 'Effect of low temperatures (−18 to +5 °C) on the texture of beef lean'. Meat Science, 81 (1):249-254.  
Morgan DJ, Walkling-Ribeiro M, Noci F, Cronin DA, Lyng JG, (2009) 'Antimicrobial effect and shelf-life extension by combined thermal and pulsed electric field treatment of milk'. Journal of Applied Microbiology, 1 (NA):241-248.  
Arimi, J.M., Duggan E., O'Riordan, D. O'Sullivan M. and Lyng J. (2008) 'Effect of refrigerated storage on water mobility and microwave expansion of imatation cheese containing resistant starch'. Journal of Food Engineering, 89 (3):258-266.  
Harbourne N., Jacquier J.C., Morgan D.J. and Lyng J.G. (2008) 'Determination of the degradation kinetics of anthocyanins in a model juice system using isothermal and non-isothermal methods'. Food Chemistry, 111 (1):204-208.  
Harbourne, N; Jacquier, JC; Morgan, DJ; Lyng, JG (2008) 'Determination of the degradation kinetics of anthocyanins in a model juice system using isothermal and non-isothermal methods'. Food Chemistry, 111 (1):204-208.  
Farag K.W., Lyng J.G., Morgan D.J., Cronin D.A. (2008) 'A comparison of conventional and radio frequency tempering of beef meats: Effects on product temperature distribution'. Meat Science, 80 (2):488-495.  
Morgan DJ, Walkling-Ribeiro M, Noci F, Cronin DA, Lyng JG, (2008) 'Inactivation of Escherichia coli in a tropical fruit smoothie by a combination of heat and pulsed electric fields'. Journal of Food Science, 8 (NA):1-9.  
Arimi J.M., Duggan E., O'Riordan E.D., O'Sullivan M. and Lyng J.G. (2008) 'Microwave expansion of imitation cheese containing resistant starch'. Journal of Food Engineering, 88 (2):254-262.  
Dr Máirtín Mac Siúrtáin
Nolan, A., K. McDonnell, M. Mac Siúrtáin, J.P. Carroll, J. Finnan and B Rice (2009) 'Conservation of miscanthus in bale form'. Biosystems Engineering, 104 (3):345-352. Available Online  
Dr David MacHugh
Gu J, Orr N, Park SD, Katz LM, Sulimova G, MacHugh DE, Hill EW (2009) 'A genome scan for positive selection in thoroughbred horses'. PLoS ONE, 4 (6). Available Online  
Machugh DE, Gormley E, Park SD, Browne JA, Taraktsoglou M, O'Farrelly C, Meade KG (2009) 'Gene Expression Profiling of the Host Response to Mycobacterium bovis Infection in Cattle'. Transboundary and emerging diseases . Available Online  
O'Gorman GM, Park SD, Hill EW, Meade KG, Coussens PM, Agaba M, Naessens J, Kemp SJ, MacHugh DE (2009) 'Transcriptional profiling of cattle infected with Trypanosoma congolense highlights gene expression signatures underlying trypanotolerance and trypanosusceptibility'. BMC Genomics, 10 . Available Online  
Berry DP, McParland S, Kearney JF, Machugh DE, (2008) 'Inbreeding effects on postweaning production traits, conformation, and calving performance in Irish beef cattle'. Journal of Animal Science, 86 (12):3338-3347.  
Meade, K.G., Gormley, E. O¿Farrelly, C. Park, S.D., Costello, E., Keane, J., Zhao, Y., MacHugh, D.E. (2008) 'Antigen stimulation of peripheral blood mononuclear cells from Mycobacterium bovis0 infected cattle yields evidence for a novel gene expression program'. BMC Genomics, 9 . Available Online  
MacHugh DE, Meade KG, Gormley E, O'Farrelly C, Park SD, Costello E, Keane J, Zhao Y, (2008) 'Antigen stimulation of peripheral blood mononuclear cells from Mycobacterium bovis infected cattle yields evidence for a novel gene expression program'. Genomics, 9 .  
Dr Bryan Markey
Sammin D., Markey B., Bassett H. and Buxton D. (2009) 'The ovine placenta and placentitis ¿ a review'. Veterinary Microbiology, 135 :90-97.  
Raleigh P.J., Flynn O., O¿Connor M., O¿Donovan T., Purcell B., De Burca M., Regazzoli V., Minihan D., Connell J., Markey B.K. and Sammin D.J. (2009) 'Avian Influenza Viruses Detected by Surveillance of Wildfowl in Ireland during 2003 ¿ 2007'. Epidemiology and Infection, 137 :464-472.  
Abbott Y, Kirby B.M., Karczmarczyk M., Markey B.K., Leonard F.C. and Fitzgerald S. (2009) 'High Level Gentamicin-Resistant and Vancomycin ¿Resistant Enterococcus faecium isolated from a wound in a dog'. Journal of Small Animal Practice, 50 :194-197.  

Dr Barry John McMahon

Anderson, A, Helden, A., Carnus, T., Gleeson, R, Sheridan, H, McMahon, B.J,. Melling, J., Lovic, Y., Purvis, G. (2008) 'Arthropod biodiversity of agricultural grassland in south and east Ireland: Introduction, sampling sites and araneae'. Bulletin of the Irish Biogeographical Society, (32):142-159.
Dr Grainne McCarthy
McCarthy, G., Shiel, R., O'Rourke, L., Murphy, D., Corner, L., Costello, E. and Gormley, E. (2009) 'Bronchoalveolar lavage cytology from captive badgers'. Veterinary Clinical Pathology, 38 (3):381-387.  
Dr Frank Monahan
Luciano, G., Monahan, F.J., Vasta, V., Biondi, L., Lanza, M., Priolo, A. (2009) 'Dietary tannins improve lamb meat colour stability'. Meat Science, 81 (81):120-125. Available Online  
Bahar, B., Moloney, A.P., Monahan, F.J., Harrison, S.M., Zazzo, A., Scrimgeour, C.M., Begley, I.S., Schmidt, O. (2009) 'Turnover of C, N and S in bovine Longissimus dorsi and Psoas major muscles: implications for isotopic authentication of meat'. JOURNAL OF ANIMAL SCIENCE, 87 :905-913. Available Online  
Dunne, P.G., Monahan, F.J., O'Mara, F.P. and Moloney, A.P. (2009) 'Colour of bovine subcutaneous adipose tissue: a review of contributory factors, associations with carcass and meat quality and its potential utility in authentication of dietary history'. Meat Science, 81 :28-45. Available Online  
Caprioli, I. O'Sullivan, M., Monahan, F.J. (2009) 'Use of sodium caseinate/glycerol edible films to reduce lipid oxidation in sliced turkey meat'. European Food Research and Technology, 228 (3):433-440. Available Online  
Dr Carmel Mooney
Schoeman JP, De Wet CS, Mooney CT, Thompson PN, (2008) 'Prevalence of and risk factors for feline hyperthyroidism in Hong Kong'. Journal of feline medicine and surgery .  
Horspool LJ, Michiels L, Reusch CE, Boari A, Petrie G, Mandigers P, Thollot IG, Rosenberg D, Mooney C, Bonfanti U, Font A, Sparkes A, Bewig K, Clercx C, Jensen AL, (2008) 'Treatment of 46 cats with porcine lente insulin--a prospective, multicentre study'. Journal of feline medicine and surgery, 10 (5):439-451.  
Professor Simon John More
Richardson, E.K.B. and More, S.J. (2009) 'Direct and indirect effects of Johne's disease on farm and animal productivity in an Irish dairy herd'. Irish Veterinary Journal, 62 (8):526-532. Available Online  
Sleeman, D.P. Davenport, J., More, S.J., Clegg, T.A., Collins, J.D., Martin, S.W., Williams, D.H., Griffin, J.M and O'Boyle, I. (2009) 'How many Eurasian badgers Meles meles L. are there in Ireland?'. European Journal of Wildlife Research, 55 (4):333-344.  
More, S.J., Cameron, A.R., Greiner, M., Clifton-Hadley, R.S., Correia Rodeia, S., Bakker, D., Salman, M.D., Sharp, J.M., De Massis, F., Aranaz, A., Boniotti, M.B., Gaffuri, A., Have, P., Verloo, D., Woodfood, M. and Weirup, M. (2009) 'Defining output-based standards to achieve and maintain tuberculosis freedom in farmed deer, with reference to member states of the European Union'. Preventive Veterinary Medicine, 90 (3-4):254-267.  
Lee, B-Y., Higgins, I.M., Moon, O-K., Clegg, T.A, McGrath, G., Collins, D.M., Park, J-Y., Yoon, H-C., Lee, S-J. and More, S.J. (2009) 'Surveillance and control of bovine brucellosis in the Republic of Korea during 2000 to 2006'. Preventive Veterinary Medicine, 90 (1-2):66-79.  
Bermingham, M.L., More, S.J., Good, M. Cromie, A.R. Higgins, I.M., Brotherstone, S. and Berry, D.P. (2009) 'Genetics of tuberculosis in Irish Holstein-Friesian dairy herds'. Journal of Dairy Science, 92 (7):3447-3456.  
Collins, J., Hanlon, A., More, S.J., Wall, P.G. and Duggan, V. (2009) 'Policy Delphi with vignette methodology as a tool to evaluate the perception of equine welfare'. The Veterinary Journal, 181 (1):63-69.  
Sleeman, D.P., Davenport, J., More, S.J., Clegg, T.A., Griffin, J.M. and O'Boyle, I. (2009) 'The effectiveness of barriers to badger Meles meles immigration in the Irish Four Area project'. European Journal of Wildlife Research, 55 (3):267-278.  
Doran, P., Carson, J., Costello, E. and More, S.J. (2009) 'An outbreak of tuberculosis affecting cattle and people on an Irish dairy farm, following the consumption of raw milk'. Irish Veterinary Journal, 62 (6):390-397. Available Online  
More, S.J. (2009) 'What is needed to eradicate bovine tuberculosis successfully: an Irish perspective'. The Veterinary Journal, 180 (3):275-278.  
Richardson, E.K.B., Mee, J.F., Sánchez-Miguel, C., Crilly, J. and More, S.J. (2009) 'Demographics of animals positive for Mycobacteria avium subspecies paratuberculosis by faecal culture, from submissions to the Cork Regional Veterinary Laboratory'. Irish Veterinary Journal, 62 (6):398-405. Available Online  
O'Connor, J., More, S.J., Griffin, J.M. and O'Leary, E. (2009) 'Modelling the demographics of the Irish cattle population'. Preventive Veterinary Medicine, 89 (3-4):249-254.  
More, S.J. (2009) 'Global trends in milk quality: implications for the Irish dairy industry'. Irish Veterinary Journal, 62 Supplement :5-14. Available Online  
Kelly, P.T., O'Sullivan, K., Berry, D.P., More, S.J., Meaney, W.J., O'Callaghan, E.J. and O'Brien, B. (2009) 'Farm management factors associated with bulk tank somatic cell count in Irish dairy herds'. Irish Veterinary Journal, 62 (Supplement):45-51. Available Online  
Hayes, M., Ashe, S., Collins, D.M., Power, S., Kenny, K., Sheahan, M., O'Hagan, G. and More, S.J. (2009) 'An evaluation of Irish cattle herds with inconclusive serological evidence of bovine brucellosis'. Irish Veterinary Journal, 62 (3):182-190. Available Online  
McGrath, G., Abernethy, D.A., Stringer, L. and More, S.J. (2009) 'An all-island approach to mapping bovine tuberculosis in Ireland'. Irish Veterinary Journal, 62 (3):192-197. Available Online  
Olea-Popelka, F.J., Fitzgerald, P. White, P., McGrath, G., Collins, J.D., O'Keeffe, J., Kelton, D.F., Berke, O., More, S.J. and Martin, S.W. (2009) 'Targeted badger removal and the subsequent risk of bovine tuberculosis in cattle herds in county Laois, Ireland'. Preventive Veterinary Medicine, 88 (3):178-184.  
Ashe, S., More, S.J, O'Keeffe, J., White, P., McGrath, G. and Aznar, I. (2009) 'Survival and dispersal of a defined cohort of Irish cattle'. Irish Veterinary Journal, 62 (1):44-49. Available Online  
Kelly, P.T., O'Sullivan, K., Berry, D.P., More, S.J., Meaney, W.J., O'Callaghan, E.J. and O'Brien, B. (2009) 'Farm management factors associated with bulk tank total bacterial count in Irish dairy herds during 2006/07'. Irish Veterinary Journal, 62 (1):36-42. Available Online  
O'Grady. L., O'Neill, R., Collins, D.M., Clegg, T.A. and More, S.J. (2008) 'Herd and within-herd IBR prevalence among Irish herds submitting bulls for entry to a bull performance testing station'. Irish Veterinary Journal, 61 (12):809-815. Available Online  
Wee, S-H., Nam, H-M., Moon, O-K. Yoon, H., Park, J.Y. and More, S.J. (2008) 'Using field-based epidemiological methods to investigate FMD outbreaks: an example from the 2002 outbreak in Korea'. Transboundary and Emerging Diseases, 55 (9):404-410.  
More, S.J., Aznar, I., Myers, T., Leadon, D.P. and Clegg, T.A. (2008) 'An outbreak of equine infectious anaemia (EIA) in Ireland during 2006: The modes of transmission and spread in the Kildare cluster'. Equine Veterinary Journal, 40 (7):709-711.  
Brangan, P., Bailey, D.C., Larkin, J.F., Myers, T. and More, S.J. (2008) 'Management of the national programme to eradicate equine infectious anaemia from Ireland during 2006: A review'. Equine Veterinary Journal, 40 (7):702-704.  
Collins, J., Hanlon, A., More, S.J. and Duggan, V. (2008) 'The structure and regulation of the Irish equine industry: links to consideration of equine welfare'. Irish Veterinary Journal, 61 (11):746-756. Available Online  
More, S.J., Aznar, I., Bailey, D.C., Larkin, J.F., Leadon, D.P., Lenihan, P., Flaherty, B., Fogarty, U. and Brangan, P. (2008) 'An outbreak of equine infectious anaemia in Ireland during 2006: Investigation methodology, initial source of infection, diagnosis and clinical presentation, modes of transmission and spread in the Meath cluster'. Equine Veterinary Journal, 40 (7):706-708.  
Corner, L.A.L., Clegg, T.A., More, S.J., O'Boyle, I., Costello, E., Sleeman, D.P. and Griffin, J.M. (2008) 'The effect of varying levels of population control on the prevalence of tuberculosis in badgers in Ireland'. Research in Veterinary Science, 85 (2):238-249.  
Wee, S-H., Yoon, H., More, S.J., Nam, H-M., Moon, O-K., Jung, J-M., Kim, S-J., Kim, C-H., Lee, E-S. and Hwang, I-J. (2008) 'Epidemiological characteristics of the 2002 outbreaks of foot-and-mouth disease in the Republic of Korea'. Transboundary and Emerging Diseases, 55 (8):360-368.  
Kelly, G., Condon, J., More, S.J., Dolan, L., Higgins, I. and Eves, J. (2008) 'A long term observational study of the impact of badger removal on herd restrictions due to bovine TB in the Irish midlands during 1989-2004'. Epidemiology & Infection, 136 (10):1362-1373.  
Dr Desmond J Morgan
Marra, F. Zell, M. Lyng,J.G. Morgan, D.J.and Cronin D.A. (2009) 'Analysis of heat transfer during ohmic processing of a solid food'. Journal of Food Engineering, 91 (1):56-63.  
Noci, F. Walkling-Ribeiro, M. Cronin, D.A. Morgan, D.J. and Lyng J.G. (2009) 'Effect of thermosonication, pulsed electric field and their combination on inactivation of Listeria innocua in milk'. International Dairy Journal, 19 (1):30-35.  
Walkling-Ribeiro M, Noci F, Cronin DA, Lyng JG, Morgan DJ (2009) 'Antimicrobial effect and shelf-life extension by combined thermal and pulsed electric field treatment of milk'. Journal of applied microbiology, 1 (NA):241-248.  
Farag, K.W. Lyng, J.G. Morgan, D.J. and Cronin D.A. (2009) 'Effect of low temperatures (−18 to +5 °C) on the texture of beef lean'. Meat Science, 81 (1):249-254.  
Walkling-Ribeiro M., Noci F., Cronin D.A., Reiner, J., Lyng J.G. and Morgan, D.J. (2008) 'Reduction of Staphylococcus aureus and quality changes in apple juice processed by ultraviolet irradiation, pre-heating and pulsed electric fields'. Journal of Food Engineering, 89 (3):267-273.  
Harbourne, N; Jacquier, JC; Morgan, DJ; Lyng, JG (2008) 'Determination of the degradation kinetics of anthocyanins in a model juice system using isothermal and non-isothermal methods'. FOOD CHEMISTRY, 111 (1):204-208.  
Walkling-Ribeiro M., Noci F., Cronin D.A., Lyng J.G. and Morgan, D.J. (2008) 'Inactivation of Escherichia coli in a Tropical Fruit Smoothie by a Combination of Heat and Pulsed Electric Fields'. Journal of Food Science, 73 (8):M395-M399.  
Dr Francesca Mossa
Evans AC, Ireland JJ, Zielak-Steciwko AE, Jimenez-Krassel F, Folger J, Bettegowda A, Scheetz D, Walsh S, Mossa F, Knight PG, Smith GW, Lonergan P, (2009) 'Variation in the ovarian reserve is linked to alterations in intrafollicular estradiol production and ovarian biomarkers of follicular differentiation and oocyte quality in cattle'. Biology of Reproduction, 80 (5):954-964.  
Naitana S, Mossa F, Leoni GG, Berlinguer F, Succu S, Madeddu M, Bebbere D, (2008) 'Recovery of COCs from ovaries with high follicle numbers enhances in vitro embryo yield in sheep'. Animal Reproduction Science, 109 (1-4):134-145.  
Dr Arantxa Munoz Perez Del Pulgar
Ananou, S., Muñoz, A., Gálvez, A., Martínez-Bueno, M., Maqueda, M., Valdivia, E. (2008) 'Optimization of enterocin AS-48 production on a whey-based substrate'. International Dairy Journal, 18 (9):923-927. Available Online  
Dr Evelyn Murphy
Brayden DJ, Keely S, Ryan SM, Haddleton DM, Limer A, Mantovani G, Murphy EP, Colgan SP, (2009) 'Dexamethasone-pDMAEMA polymeric conjugates reduce inflammatory biomarkers in human intestinal epithelial monolayers'. Journal of controlled release : official journal of the Controlled Release Society, 1 (NA):35-43.  
Dr Jarlath Nally
Nally JE, Sayers G, Marques PX, Evans NJ, O'Grady L, Doherty ML, Carter SD, (2009) 'Identification of spirochetes associated with contagious ovine digital dermatitis'. JOURNAL OF CLINICAL MICROBIOLOGY, 4 (NA):1199-1201.  
Avril M. Monahan, John J. Callanan, and Jarlath E. Nally (2008) 'A proteomic analysis of Leptospira0 being shed in urine of chronically infected hosts'. Infection and Immunity, 76 (11):4952-4958.  

Professor Maarten Nieuwenhuis

Nieuwenhuis, M. and Codd, J. (2009) 'A Feasibility Study of Harwarder Use in the Thinning of Private Forests in Ireland'. Irish Forestry, 65 (1 & 2):37-46.  

Black, K., Byrne, K., Mencuccini, M., Tobin, B., Nieuwenhuis, M., Reidy, B., Bolger, T., Saiz, G., Green, C., Farrell, E. and Osborne, B. (2009) 'Carbon stock and  stock changes across a Sitka spruce chronosequence on surface-water gley soils'. Forestry.  
Browne, I., Layton, T. and Nieuwenhuis, M. (2008) 'The Impact of Sitka Spruce Log Dimensions on Recovery'. Irish Forestry, 64 (1&2):61-71.

Dr Aine Ni Dhubhain
Ní Dhubháin, Á., Flechard, M., Moloney, R., O¿Connor, D., and Crowley, T. (2009) 'Stakeholder¿s perspectives of forestry in rural areas ¿ two case studies in Ireland'. Land Use Policy, 26 (3):695-703.  
Ní Dhubháin, Á., Flechard, M., Moloney, R., O¿Connor, D., and Crowley, T. (2009) 'Assessing the value of forestry to the Irish economy ¿ An input-output approach'. Forest Policy and Economics, 11 (1):50-55.  
Dr Francesco Noci
Walkling-Ribeiro, M.,Noci, F.,Cronin, D. A.,Lyng, J. G.,Morgan, D. J. (2009) 'Antimicrobial effect and shelf-life extension by combined thermal and pulsed electric field treatment of milk'. Journal of Applied Microbiology, 106 (1):241-248. Available Online  
Noci, F.,Walkling-Ribeiro, M.,Cronin, D. A.,Morgan, D. J.,Lyng, J. G. (2009) 'Effect of thermosonication, pulsed electric field and their combination on inactivation of Listeria innocua in milk'. International Dairy Journal, 19 (1):30-35. Available Online  
Riener, J.,Noci, F.,Cronin, D. A.,Morgan, D. J.,Lyng, J. G. (2009) 'Effect of high intensity pulsed electric fields on enzymes and vitamins in bovine raw milk'. International Journal of Dairy Technology, 62 (1):1-6. Available Online  
Riener, Joerg,Noci, Francesco,Cronin, Denis A.,Morgan, Desmond J.,Lyng, James G. (2009) 'The effect of thermosonication of milk on selected physicochemical and microstructural properties of yoghurt gels during fermentation'. Food Chemistry, 114 (3):905-911. Available Online  
Riener, Joerg,Noci, Francesco,Cronin, Denis A.,Morgan, Desmond J.,Lyng, James G. (2009) 'Characterisation of volatile compounds generated in milk by high intensity ultrasound'. International Dairy Journal, 19 (4):269-272. Available Online  
Riener, J.,Noci, F.,Cronin, D. A.,Morgan, D. J.,Lyng, J. G. (2009) 'Combined effect of temperature and pulsed electric fields on pectin methyl esterase inactivation in red grapefruit juice (Citrus paradisi)'. European Food Research and Technology, 228 (3):373-379. Available Online  
Morgan DJ, Walkling-Ribeiro M, Noci F, Cronin DA, Lyng JG, (2009) 'Antimicrobial effect and shelf-life extension by combined thermal and pulsed electric field treatment of milk'. Journal of Applied Microbiology, 106 (1):241-248.  
Morgan DJ, Walkling-Ribeiro M, Noci F, Cronin DA, Lyng JG, (2008) 'Inactivation of Escherichia coli in a tropical fruit smoothie by a combination of heat and pulsed electric fields'. Journal of Food Science, 73 (8):1-9.  
Mr Tom Norton
Norton, T., Sun, D-W., Grant, J., Fallon, R. (2009) 'Assessing the ventilation effectiveness of naturally ventilated livestock buildings under wind dominated conditions using computational fluid dynamics'. Biosystems Engineering, 103 (1):78-99.  
Norton, T., Delgado, A. Hogan, E., Grace, P. & Sun, D-W (2009) 'Simulation of high pressure freezing processes by enthalpy method'. Journal of Food Engineering, 91 (268).  
Dr Deirdre O'Connor
NiDhubhain, A, Flechard, M., Moloney, R., O' Connor, D. and Crowley, T. (2009) 'Assessing the Value of Forestry to the Irish Economy - an Input Output Approach'. Forest Policy and Economics, 11 (1):50-55.  
Ni Dhubhain, A., Flechard, M., Moloney, R., O Connor, D. and Crowley, T. (2009) 'Stakeholders' Perspectives of Forestry in Rural Areas - Two Case Studies in Ireland'. Land Use Policy, 26 (3):695-703.  
Professor John O'Doherty
C. Pauly, P. Spring, J. V. O¿Doherty, S. Ampuero Kragten, G. Bee (2009) 'Growth performance, carcass characteristics and meat quality of group-penned surgically castrated, immunocastrated (Improvac®) and entire male pigs and individually penned entire male pigs'. Animal, 3 (7):1057-1066.  
C.J. O¿Shea., M.B.Lynch, J.J.Callan and J.V.O¿Doherty (2009) 'Ammonia emissions and dry matter of separated pig manure fractions as affected by crude protein concentration and sugar beet pulp inclusion of finishing pig diets'. Agriculture, Ecosystems and Environment, 131 (3-4):154-160.  
M.B.Lynch, J.J.Callan and J.V.O¿Doherty (2009) 'The interaction between  dietary crude protein and fermentable carbohydrate source on post weaning performance, diet digestibility and selected faecal microbial populations and volatile fatty acid concentration'. Livestock Science, 124 :93-100.  
C. Pauly, P. Spring, J. O¿Doherty, S. Ampuero K., G. Bee (2008) 'Performance, meat quality and boat taint of castrates and entire male pigs fed a standard and a raw potato starch-enriched diet'. Animal, 2 (11):1707-1715.  
P. Reilly,J.V. O¿Doherty , K.M. Pierce, J.J. Callan, J.T. O¿ Sullivan and T. Sweeney (2008) 'The effects of seaweed extract inclusion on gut health and immune status of the weaned pig'. Animal, 2 (10):1465-1473.  
Dr Colm O'Donnell
Gowen, A., Taghizadeh, M. and O'Donnell, C.P. (2009) 'Identification of mushrooms subjected to freeze damage using hyperspectral imaging'. Journal of Food Engineering, 93 (1):7-12.  
Tiwari, B.K., O'Donnell, C.P. and Cullen, P.J. (2009) 'Effect of sonication on retention of anthocyanins in blackberry juice'. Journal of Food Engineering, 93 (2):166-171.  
Mateo, M.J., O'Callaghan, D.J., Everard, C.D., Fagan, C.C., Castillo, M., Payne, F.A. and O'Donnell, C.P. (2009) 'Influence of curd cutting programme and stirring speed on the prediction of syneresis indices in cheese-making using NIR light backscatter'. Lwt-Food Science and Technology, 42 (5):950-955.  
Tiwari, B., O'Donnell, C.P., Brunton, N.P., and Cullen, P.J. (2009) 'Degradation kinetics of tomato juice quality parameters by ozonation'. International Journal of Food Science and Technology, 44 (6):1199-1205.  
Talens, C., D.J. O'Callaghan, C.D. Everard, C.C. Fagan, M. Castillo, F.A. Payne and C.P. O'Donnell, (2009) 'Evaluation of an improved tracer method to monitor cheese curd syneresis at varying milk fat levels in a cheese vat'. Milchwissenschaft, 64 (2):161-164.  
Woodcock, T., Downey, G., O'Donnell C.P. (2009) 'Near infrared spectral fingerprinting for confirmation of claimed PDO provenance of honey'. Food Chemistry, 114 (2):742-746.  
Tiwari, B., O'Donnell, C.P., Patras, A., Brunton, N., and Cullen, P.J. (2009) 'Effect of ozone processing on anthocyanins and ascorbic acid degradation of strawberry juice'. Food Chemistry, 113 (4):1119-1126.  
Tiwari, B.K., O'Donnell, C.P. and Cullen, P.J. (2009) 'Effect of non thermal processing technologies on the anthocyanin content of fruit juices'. Trends in Food Science and Technology, 20 (3-4):137-145.  
Mateo, M.J., Everard, C. D., Fagan, C.C., O'Donnell, C.P., Castillo, M., Payne, F.A., O'Callaghan, D.J., (2009) 'Effect of milk fat concentration and gel firmness on syneresis during curd stirring in cheese-making'. International Dairy Journal, 19 (4):264-268.  
Tiwari, B.K., Muthukumarappan, K., O'Donnell, C.P., and Cullen, P.J. (2009) 'Inactivation kinetics of pectin methylesterase and cloud retention in sonicated orange juice'. Innovative Food Science and Emerging Technologies, 10 (2):166-171.  
Tiwari, B. K., O'Donnell, C.P. and Cullen, P.J. (2009) 'New challenges in food science and technology: an industrial perspective'. Trends in Food Science and Technology, 20 (3-4):180-181.  
Tiwari, B.K., O' Donnell, C.P., Muthukumarappan, K., Cullen, P.J. (2009) 'Ascorbic acid degradation kinetics of sonicated orange juice during storage and comparison with thermally pasteurised juice'. Lwt-Food Science and Technology, 42 (3):700-704.  
Fagan, C.C., Castillo, M., O'Callaghan, D.J., Payne, F.A. and O'Donnell, C.P. (2009) 'Visible-near infrared spectroscopy sensor for predicting curd and whey composition during cheese processing'. Sensing and Instrumentation for Food Quality and Safety, 3 (1):62-69.  
Tiwari, B.K., O'Donnell, C.P., Patras, A., Brunton, N., and Cullen, P.J. (2009) 'Stability of anthocyanins and ascorbic acid in sonicated strawberry juice during storage'. European Food Research and Technology, 228 (5):717-724.  
Tiwari, B.K., O' Donnell, C.P., Muthukumarappan, K., Cullen, P.J. (2009) 'Effect of sonication on orange juice quality parameters during storage'. International Journal of Food Science and Technology, 44 (3):586-595.  
Hennessy, S., Downey, G. and O'Donnell, C.P. (2009) 'Confirmation of food origin claims by Fourier transform infrared spectroscopy and chemometrics: extra virgin olive oil from Liguria'. Journal of Agricultural and Food Chemistry, 57 (5):1735-1741.  
Tiwari, B.K., O'Donnell, C.P., Muthukumarappan, K., Cullen, P.J. (2009) 'Effect of low temperature sonication on orange juice quality parameters using response surface methodology'. Food and Bioprocess Technology, 2 :109-114.  
Esquerre, C., Gowen, A., O'Donnell, C.P. and Downey, G. (2009) 'Initial studies on the quantitation of bruise damage and freshness in mushrooms using visible-near infrared spectroscopy'. Journal of Agricultural and Food Chemistry, 57 (5):1903-1907.  
Cullen, P.J, Tiwari, B.K., O'Donnell, C.P. and Muthukumarappan, K. (2009) 'Modelling approaches to ozone processing of liquid foods'. Trends in Food Science and Technology, 20 (3-4):125-136.  
De Marchi, M., Fagan, C., O'Donnell, C.P., Cecchinato, A., Dal Zotto, R., Cassandro, M., Penasa, M., Bittante G. (2009) 'Prediction of coagulation properties, titratable acidity and pH of bovine milk using mid-infrared spectroscopy'. Journal of Dairy Science, 92 :423-432.  
Tiwari, B.K., K. Muthukumarappan, C.P. O'Donnell and P.J. Cullen (2008) 'Colour degradation and quality parameters of sonicated orange juice using response surface methodology'. LWT - Food Science and Technology, 41 (10):1876-1883.  
Tiwari, B.K., O'Donnell, C.P., Patras, A., and Cullen, P.J. (2008) 'Anthocyanin and ascorbic acid degradation in sonicated strawberry juice'. Journal of Agricultural and Food Chemistry, 56 (21):10071-10077.  
Woodcock, T., Downey, G., O'Donnell, C.P. (2008) 'Confirmation of Declared Provenance of European Extra Virgin Olive Oil Samples by NIR Spectroscopy'. Journal of Agricultural and Food Chemistry, 56 (23):11520-11525.  
Tiwari, B.K., K. Muthukumarappan, C.P. O'Donnell, and P.J. Cullen (2008) 'Modelling colour degradation of orange juice by ozone treatment using response surface methodology'. Journal of Food Engineering, 88 (4):553-560.  
Tiwari, B.K., O'Donnell, C.P., Cullen, P.J., Muthukumarappan, K. (2008) 'Effect of ultrasound processing on the quality and nutritional properties offruit juices'. Stewart Postharvest Review, 4 (5):1-6. Available Online  

Hennessy, S., G. Downey, and C.P. O'Donnell (2008) 'Multivariate analysis of ATR/FT-IR spectroscopic data to confirm the geographic origin of honey'. Applied Spectroscopy, 62 (10):1115-1123. Available Online  
Gowen, A.A., C. P. O'Donnell, M. Taghizadeh, E. Gaston, A. O'Gorman, P. J. Cullen, J. M. Frias, C. Esquerre and G. Downey (2008) 'Hyperspectral imaging for the investigation of quality deterioration in sliced mushrooms (Agaricus bisporus) during storage'. Sensing and Instrumentation for Food Quality and Safety, 2 (3):133-143.  
Dr Grace Margaret O'Gorman
O'Gorman GM, Park SD, Hill EW, Meade KG, Coussens PM, Agaba M, Naessens J, Kemp SJ, Machugh DE (2009) 'Transcriptional profiling of cattle infected with Trypanosoma congolense highlights gene expression signatures underlying trypanotolerance and trypanosusceptibility'. BMC Genomics .  
Mr Luke O'Grady
Mulherin, E., Bryan, J., Beltman, M., O'Grady, l., Pidgeon, E., Garon, L., Lloyd, A., Bainbridge, J., O'Shea, H., Whyte, P., Fanning, S. (2008) 'Molecular characterisation of a bovine-like rotavirus detected from a giraffe'. BMC Veterinary Research .  
Dr Conor O'Reilly
O'Reilly, C. et al., (2008) 'Increasing the yield and quality of broadleaf planting stock through higher N fertilisation in the nursery'. Irish Forestry, 65 :5-16.  
Professor Dolores O'Riordan
Harbourne, Niamh and Jacquier, Jean Christophe and O'Riordan, Dolores (2009) 'Optimisation of the extraction and processing conditions of chamomile (Matricaria chamomilla L.) for incorporation into a beverage'. FOOD CHEMISTRY, 115 (1):15-19.  
O'Sullivan M, Halpin RM, Brady DB, O'Riordan ED, (2009) 'Untreated and enzyme-modified bovine whey products reduce association of Salmonella Typhimurium, Escherichia coli O157:H7 and Cronobacter malonaticus (formerly Enterobacter sakazakii) to CaCo-2 cells'. Journal of applied microbiology .  
Halpin et al. (2008) 'Inhibition of adhesion of Streptococcus mutans to hydroxlapatite by commercial dairy powders and individual milk proteins'. European Food Research and Technology, 227 .  
Mr Mick O'Sullivan
Caprioli, I. O'Sullivan, M., Monahan, F.J. (2009) 'Use of sodium caseinate/glycerol edible films to reduce lipid oxidation in sliced turkey meat'. European Food Research and Technology, 228 (3):433-440. Available Online  
Dr Philip Owende
Spinelli R, SM Ward, PM Owende (2009) 'A harvest and transport cost model for Eucalyptus spp. fast-growing short rotation plantations'. Biomass and Bioenergy, 33 (9):1265-1270.  
Mohsenimanesh A, SM Ward, PMO Owende, A Javadi. (2009) 'Modelling of pneumatic tractor tyre interaction with multi-layered soil'. Biosystems Engineering, 104 (2):191-198. Available Online  
Goglio P, P Owende (2009) 'Screening LCA of short rotation coppice willow (Salix sp.) feedstock production system for small scale electricity generation'. Biosystems Engineering, 103 (3):389-394.  
Dr Karina Pierce
Begley, N., F. Buckley, K. Pierce, A.G. Fahey and B.A. Mallard (2009) 'Differences in udder health and immune response traits in Holstein-Friesian, Norwegian Red and Holstein-Friesian × Norwegian Red dairy cows in second lactation'. Journal of Dairy Science, 92 (92):779-787.  
Begley, N., Buckley, F., Burnside, E., Schaeffer, L., Rath, M., Pierce, K. and Mallard, B.A. (2009) 'Immune response of Holstein and Norwegian Red×Holstein calves on Canadian dairy farms'. Journal of Dairy Science, 92 :518-525.  
Dr Gordon Purvis
Purvis, G., Louwagie, G., Northey, G., Mortimer, S., Park, J., Mauchline, A., Finn, J., Primdahl, J., Vejre, H., Vesterager, J-P., Knickel, K., Kasperczyk, N., Balázs, K., Vlahos, G., Christopoulos, S., Peltola, J. (2009) 'Conceptual development of a harmonised method for tracking change and evaluating policy in the agri-environment: the Agri-environmental Footprint Index'. Environmental Science and Policy, 12 (3):321-337.  
Dr Marion Ryan
Crowe MA, Lane EA, Sweeney T, Ryan M, Roche JF, (2009) 'Relationship between serum gonadotropins and pituitary immunoreactive gonadotropins and steroid receptors during the first FSH increase of the estrous cycle and following steroid treatment in heifers'. Animal Reproduction Science, 112 (1-2):66-82.  
Ryan MT, Baird AW, Mulholland CW,Irwin JA, (2009) 'Practical classes: a platform for deep learning? Overall context in the first-year veterinary curriculum'. Journal of veterinary medical education, 2 (NA):180-185.  
Dr Amalia Scannell
Drummond, Liana,Sun, Da-Wen,Vila, Clara Talens,Scannell, Amalia G. M. (2009) 'Application of immersion vacuum cooling to water-cooked beef joints - Quality and safety assessment'. LWT - Food Science and Technology, 42 (1):332-337. Available Online  
Mr Conor Shanahan
Conor Shanahan, Brendan Kernan, Gashaw Ayalew, Kevin McDonnell, Francis Butler and Shane Ward (2009) 'A framework for beef traceability from farm to slaughter using global standards: An Irish perspective'. COMPUTERS AND ELECTRONICS IN AGRICULTURE, 66 (1):62-69. Available Online  
Dr Olaf Schmidt 
Balter V, Moynier F, Pons ML, Zazzo A, Kearney T, Moloney A, Schmidt O, Thackeray F, Albarede F (2009) 'Natural zinc isotope variations in mammals'. Geochimica Et Cosmochimica Acta, 73 (13, Supplement 1):A83-A83.   
Thakuria, D., Schmidt, O., Liliensiek, A.K., Egan, D. and Doohan, F.M. (2009) 'Field preservation and DNA extraction methods for intestinal microbial diversity analysis in earthworms'. Journal of Microbiological Methods, 76 (3):226-233.  
Bahar, B., Moloney, A.P., Monahan, F.J., Harrison, S.M., Zazzo, A., Scrimgeour, C.M., Begley, I.S., Schmidt, O. (2009) 'Turnover of carbon, nitrogn and sulfur in bovine longissimus dorsi and psoas major muscles: implications for isotopic authentication of meat'. Journal of Animal Science, 87 (3):905-913.  
Leroy BLM, Schmidt O, van den Bossche A, Reheul D, Moens M (2008) 'Earthworm population dynamics as influenced by the quality of exogenous organic matter'. Pedobiologia, 52 (2):139-150.  
Zazzo A, Moloney AP, Monahan FJ, Scrimgeour CM, Schmidt O (2008) 'Effect of age and food intake on dietary carbon turnover recorded in sheep wool'. Rapid Communications in Mass Spectrometry, 22 (18):2937-2945.

Dr Helen Sheridan

Sheridan, H., Finn, J.A., O'Donovan, G. (2009) 'Diversity of Syrphidae (Diptera) on two Irish grassland farms'. Tearmann ‘ the Irish Journal of Agri-Environmental Research, 6 :69-82.
Professor Da-Wen Sun
L. Drummond, Da-Wen Sun, C. T. Vila and A. G. M. Scannell (2009) 'Application of Immersion Vacuum Cooling to Water-Cooked Beef Joints – Quality and Safety Assessment'. LWT-FOOD SCIENCE AND TECHNOLOGY, 42 (1):332-337.  
P. Jackman, Da-Wen Sun and P. Allen (2009) 'Comparison of Various Wavelet Texture Features to Predict Beef Palatability'. Meat Science, 83 (1):82-87.  
P. Jackman, Da-Wen Sun and P. Allen (2009) 'Automatic Segmentation of Beef Longissimus Dorsi Muscle and Marbling by an Adaptable Algorithm'. Meat Science, 83 (2):187-194.  
T. Norton, A. Delgado, E. Hogan, P. Grace and Da-Wen Sun (2009) 'Simulation of High Pressure Freezing Processes by Enthalpy Method'. Journal of Food Engineering, 91 (2):260-268.  
T. Norton, J. Grant, R. Fallon and Da-Wen Sun (2009) 'Assessing the Ventilation Effectiveness of Naturally Ventilated Livestock Buildings under Wind Dominated Conditions Using Computational Fluid Dynamics'. Biosystems Engineering, 103 (1):78-99.  
F. Mendoza, N. A. Valous, Da-Wen Sun and Paul Allen (2009) 'Characterization of Fat-Connective Tissue Size Distribution in Pre-sliced Pork Hams Using Multifractal Analysis'. Meat Science, 83 (4):713-722.  
S. Yu, Y. Ma and Da-Wen Sun (2009) 'Impact of Amylose Content on Starch Retrogradation and Texture of Cooked Milled Rice during Storage'. Journal of cereal science, 50 (2):139-144.  
P. Jackman, Da-Wen Sun, C. J. Du and P. Allen (2009) 'Prediction of Beef Eating Qualities from Colour, Marbling and Wavelet Surface Texture Features using Homogenous Carcass Treatment'. Pattern Recognition, 42 (5):751-763.  
C. J. Du and Da-Wen Sun (2009) 'Retrospective Shading Correction of Confocal Laser Scanning Microscopy Beef Images for Three-Dimensional Visualization'. Food and Bioprocess Technology, 2 (2):167-176.  
Y. Ma and Da-Wen Sun (2009) 'Hardness of Cooked Rices as Affected by Varieties, Cooling Methods and Chill Storage'. JOURNAL OF FOOD PROCESS ENGINEERING, 32 (2):161-176.  
F. Mendoza, N. A. Valous, P. Allen, T. A. Kenny, P. Ward, and Da-Wen Sun (2009) 'Analysis and Classification of Commercial Ham Slice Images Using Directional Fractal Dimension Features'. Meat Science, 81 (2):313-320.  
P. Jackman, Da-Wen Sun and P. Allen (2009) 'Comparison of the Predictive Power of Beef Surface Wavelet Texture Features at High and Low Magnification'. Meat Science, 82 (3):353-356.  
R. Zhao, E. Chen, M. Lin, Da-Wen Sun and B. Xu (2009) 'Characteristics of Chamber Temperature Change during Vacuum Cooling'. JOURNAL OF FOOD PROCESS ENGINEERING, 32 (2):177-186.  
N. A. Valous, F. Mendoza, Da-Wen Sun and P. Allen (2009) 'Texture Appearance Characterization of Pre-Sliced Pork Ham Images Using Fractal Metrics: Fourier Analysis Dimension and Lacunarity'. FOOD RESEARCH INTERNATIONAL, 42 (3):353-362.  
N. A. Valous, F. Mendoza, Da-Wen Sun and Paul Allen (2009) 'Colour Calibration of a Laboratory Computer Vision System for Quality Evaluation of Pre-sliced Hams'. Meat Science, 81 (1):132-141.  
W. Wu, H. Zhang and Da-Wen Sun (2009) 'Mathematical Simulation and Experimental Study of a Modified Zeolite 13X-Water Adsorption Refrigeration Module'. Applied Thermal Engineering, 29 (4):645-651.  
A. E. Delgado, L. Y. Zheng and Da-Wen Sun (2009) 'Influence of Ultrasound on Freezing Rate of Immersion-frozen Apples'. Food and Bioprocess Technology, 2 (3):263-270.  
C. J. Du, Da-Wen Sun, P. Jackman and P. Allen (2008) 'Development of a Hybrid Image Processing Algorithm for Automatic Evaluation of Intramuscular Fat Content in Beef M. Longissimus dorsi0'. Meat Science, 80 (4):1231-1237.  
F. Xu, W.-J. Yu, Da-Wen Sun, X.-Q. Xu and T.-C. Hua (2008) 'Performance Comparison of Free and Immobilized Chicken Liver Esterase Inhibited by Four Different Pesticides'. Journal of the Science of Food and Agriculture, 88 (14):2538-2542.  
P. Jackman, Da-Wen Sun, C. J. Du, P. Allen and G. Downey (2008) 'Prediction of Beef Eating Quality from Colour, Marbling and Wavelet Texture Features'. Meat Science, 80 (4):1273-1281.  
Y. Xu, T.-C. Hua, Da-Wen Sun and G.-Y. Zhou (2008) 'Experimental Study and Analysis of Mechanical Properties of Frozen Rabbit Aorta by Fracture Mechanics Approach'. Journal of Biomechanics, 41 (3):649-655.  
Professor Torres Sweeney
Lenahan, M.,Crowley, H.,O'Brien, S. B.,Byrne, C.,Sweeney, T.,Sheridan, J. J. (2009) 'The potential use of chilling to control the growth of Enterobacteriaceae on porcine carcasses and the incidence of E-coli O157:H7 in pigs'. Journal of Applied Microbiology, 106 (5):1512-1520. Available Online  
Lane, E. A.,Sweeney, T.,Ryan, M.,Roche, J. F.,Crowe, M. A. (2009) 'Relationship between serum gonadotropins and pituitary immunoreactive gonadotropins and steroid receptors during the first FSH increase of the estrous cycle and following steroid treatment in heifers'. Animal Reproduction Science, 112 (1-2):66-82. Available Online  
Scott, L.,Mcgee, P.,Walsh, C.,Fanning, S.,Sweeney, T.,Blanco, J.,Karczmarczyk, M.,Earley, B.,Leonard, N.,Sheridan, J. J. (2009) 'Detection of numerous verotoxigenic E. coli serotypes, with multiple antibiotic resistance from cattle faeces and soil'. Veterinary Microbiology, 134 (3-4):288-293. Available Online  
Aslan, O.,Hamill, R. M.,Sweeney, T.,Reardon, W.,Mullen, A. M. (2009) 'Integrity of nuclear genomic deoxyribonucleic acid in cooked meat: Implications for food traceability'. Journal of Animal Science, 87 (1):57-61. Available Online  
Pannier, L.,Sweeney, T.,Hamill, R. M.,Ipek, F.,Stapleton, P. C.,Mullen, A. M. (2009) 'Lack of an association between single nucleotide polymorphisms in the bovine leptin gene and intramuscular fat in Bos taurus cattle'. Meat Science, 81 (4):731-737. Available Online  
O'Halloran, F.,Bahar, B.,Buckley, F.,O'Sullivan, O.,Sweeney, T.,Giblin, L. (2009) 'Characterisation of single nucleotide polymorphisms identified in the bovine lactoferrin gene sequences across a range of dairy cow breeds'. Biochimie, 91 (1):68-75. Available Online  
Bahar, B.,Sweeney, T. (2008) 'Mapping of the transcription start site (TSS) and identification of SNPs in the bovine neuropeptide Y (NPY) gene'. Bmc Genetics, 9 . Available Online  
M. B. Lynch, C. J. O¿Shea, T. Sweeney, J. J. Callana and J. V. O¿Doherty (2008) 'Effect of crude protein concentration and sugar-beet pulp on nutrient digestibility, nitrogen excretion, intestinal fermentation and manure ammonia and odour emissions from finisher pigs'. Animal, 2 :425-434.  
Boland, TM, Hayes, L, Sweeney, T, Callan, JJ, Baird, AW, Keely, S, Crosby, TF (2008) 'The effects of cobalt and iodine supplementation of the pregnant ewe diet on immunoglobulin G, vitamin E, T-3 and T-4 levels in the progeny'. Animal, 2 (2):197-206.  
Lynch MB, Sweeney T, Callan JJ and O'Doherty JV (2008) 'Effects of increasing the intake of dietary β-glucans by exchanging wheat for barley on nutrient digestibility, nitrogen excretion, intestinal microflora, volatile fatty acidconcentration and manure ammonia emissions in finishing pigs'. Animal, 1 (6):812-819.  
Mr Brijesh Tiwari
Tiwari BK, Valdramidis VP, O'Donnell CP, Muthukumarappan K, Bourke P, Cullen PJ, (2009) 'Application of natural antimicrobials for food preservation'. Journal of Agricultural and Food Chemistry, 57 (14):5987-6000.  
Tiwari, B.K., O'Donnell, C.P., Muthukumarappan, K., Cullen, P.J. (2009) 'Effect of Low Temperature Sonication on Orange Juice Quality Parameters using Response Surface Methodology'. Food and Bioprocess Technology .  
Tiwari, B.K., K. Muthukumarappan, C.P. O'Donnell and P.J. Cullen (2008) 'Colour degradation and quality parameters of sonicated orange juice using response surface methodology'. Lwt-Food Science and Technology, 41 (10):1876-1883.  
Tiwari BK, Muthukumarappan K, O'Donnell CP, Cullen PJ (2008) 'Effect of sonication on orange juice quality parameters during storage'. International Journal of Food Science and Technology .  
Tiwari, B.K., C.P. O'Donnell, K. Muthukumarappan and P.J. Cullen (2008) 'Effect of ultrasound processing on quality of fruit juices'. Stewart Postharvest Review .  
Cullen PJ, Tiwari BK, O'Donnell CP, Patras A, (2008) 'Anthocyanin and Ascorbic Acid Degradation in Sonicated Strawberry Juice'. Journal of agricultural and food chemistry .  
Patras, A., Tiwari, B.K., Brunton, N.P., and Butler, F. (2008) 'Modelling the effect of different sterilization treatments on antioxidant activity and colour of carrot slices during storage'. Food Chemistry .  
Tiwari, B.K., K. Muthukumarappan, C.P. O'Donnell, and P.J. Cullen (2008) 'Modelling colour degradation of orange juice by ozone treatment using response surface methodology'. Journal of Food Engineering, 88 (4):553-560.  
1. Tiwari, B.K., O¿Donnell, C.P., Patras, A., Brunton, N.P., and Cullen, P.J. (2008) 'Effect of ozone processing on anthocyanins and ascorbic acid degradation of strawberry juice'. Food Chemistry .  
Professor Shane Ward
G. P. Corkery, U. Gonzales‐Barron, G. Ayalew, S. Ward, K. McDonnell (2009) 'A PRELIMINARY INVESTIGATION OF AVIAN COMB AS A POTENTIAL BIOMETRIC MARKER FOR IDENTIFICATION OF POULTRY'. Transactions of the American Society of Agricultural En, 52 (3):991-998.  
coffey, r., Cummins, E. and S. Ward (2009) 'Exposure assessment of mycotoxins in dairy milk'. Food Control, 20 :239-249. Available Online  
A. Mohsenimanesha, S.M. Ward and M.D. Gilchrist (2009) 'Stress analysis of a multi laminated tractor tyre using nonlinear 3D finite element analysis'. Materials and Design, 30 :1124-1132. Available Online  
Dr Paul Whyte
Acke, E., McGill, K., Quinn, T., Jones, B.R., Fanning, S., Whyte, P. (2009) 'Antimicrobial resistance profiles and mechanisms of resistance in Campylobacter jejuni isolates from pets'. Foodborne Pathogens and Disease, 6 :705-710.  
Kelly, L., Murchie, L., Xia, B., Whyte, P., Madden, R.H. (2009) 'Probabilistic model for contamination of egg dishes with Salmonella spp. made from shell eggs produced on the island of Ireland'. International Journal of Food Microbiology, 135 .  
Acke, E., McGill, K., Golden, O., Jones, B.R., Fanning, S., Whyte, P. (2009) 'Prevalence of thermophilic Campylobacter0 species in household pets in Ireland. '. The Veterinary Record, 164 :44-47.  
50. Mulherin, E., Bryan, J., Beltman, M., O¿Grady, L., Pidgeon, E., Garon, L., Lloyd, A., Bainbridge, J., O¿Shea, H., Whyte, P., Fanning, S. (2008) 'Molecular characterisation of a bovine-like rotavirus detected from a giraffe'. BMC Veterinary Research, 4 (46).  
Fanning S, Mullane N, Healy B, Meade J, Whyte P, Wall PG, (2008) 'Dissemination of Cronobacter spp. (Enterobacter sakazakii) in a powdered milk protein manufacturing facility'. Applied and environmental microbiology, 19 (NA):5913-5917.  
Fanning S, O'Regan E, McCabe E, Burgess C, McGuinness S, Barry T, Duffy G, Whyte P, (2008) 'Development of a real-time multiplex PCR assay for the detection of multiple Salmonella serotypes in chicken samples'. BMC microbiology, (NA).  
Dr Pádraig Wims
Wims, P and Kingsly, Z (2008) 'Role of Seed Improvement Projects in Improving Household Food Security in Zambia: A Valuable Role for Extension'. Journal of Extension Systems, 24 (2):1-15. Available Online  
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Other Journals
Mr Florent David
Cousty M, David F, Geoffroy O (2008) 'Tutorial article: Intra-operative ultrasonography - What you can get?' Pratique Veterinaire Equine, 40 (160):65-69.  
David F, Vinardell T, Cousty M, Engeli M (2008) 'Tutorial article: Ultrasound evaluation of the equine pelvic region - A practical approach' Pratique Veterinaire Equine, 40 (Special issue):85-94.  
Cousty M, Geoffroy O, David F (2008) 'Technical notes: Ultrasound-guided injections of the sacroiliac region in horses' Pratique Veterinaire Equine, 40 (Special issue):151-154.  
Professor Ronan Gormley
Gormley, T.R. (2009) 'Cooperation ISAFRUIT' Food Science and Technology, 23 (3):26-28.  
Gormley, T.R., Roessle, C. and Butler, F. (2009) 'An apple a day' TResearch, 4 (3):38-39.  
Dr Alison J Hanlon
Hanlon, A. (2008) 'Animal Welfare in Veterinary Medicine Education' REDVET. Revista electrónica de Veterinaria, Vol. IX (10B).Available Online  
Dr Yumi Hashim
Mel, M.; Mat Saad, M.; Hashim, Y.Z.H-Y. and Mohamad Salleh, M.R (2008) 'Monoclonal Antibody Production: Media Optimization for Enhancement the Cell Viability of Hybridoma Cell' Asian Journal of Scientific Research .  
Dr Ingrid Maria Lorenz
Lorenz, I. (2009) 'An update on calf diarrhoea Part 2: Prevention' Irish Veterinary Journal .  
Lorenz, I. (2009) 'An update on calf diarrhoea Part 1: Pathophysiology and treatment' Irish Veterinary Journal .  
Lorenz, I. (2008) 'Basics of successful dairy calf rearing ¿ Focus on immunity and resistance' Cattle Practice .  
Professor Simon John More
More, S.J. (2008) 'Towards TB eradication: where to from here?' Cattle Practice, 16 (2):127-130.  

Professor Maarten Nieuwenhuis 

Armand Tene, Brian Tobin, Duncan Ray, Kevin Black and Maarten Nieuwenhuis (2009) 'Adaptability of forest species to climate change' Irish Timber and Forestry, 18 (2):16-19.  
Gallagher, C., O'Reilly, C. and Nieuwenhuis, M. (2009) 'The Benefits of Shelter to Early Western Hemlock Growth in Iceland' Irish Timber and Forestry, 18 (1):16-19.
Nieuwenhuis, M., Mengesha, T. and Harper, C. (2009) 'Estimating Timber Volumes' Science Spin .   
Keegan, M. and Nieuwenhuis, M. (2008) 'The effects of tree quality on harvester productivity' Irish Timber and Forestry, 17 (6):16-19.  

Sheehan Hammond, N., Ni Dhubhain, A. and Nieuwenhuis, M. (2008) 'Changing light levels in a Sitka spruce stand' Irish Timber and Forestry, 17 (5):27-29.

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Conference Publications
Professor Pieter Brama
Kobrina YE, Isakson H, Sinisaari M, Brama P, van Weeren PR, Helminen H, Jurvelin JS, Saarakkala S (2009) Infrared spectroscopy can detect qualitative and quantitative differences in subchondral bone during maturation Orthopedic Research Society: 56th Annual Meeting,  
Brama PA (2009) The fetlock joint: Implementing fundamental research into clinical practice Britisch Equine Veterinary Association: 48th Annual Conference, 133 - 134  
Viren T, Saarakkala S, Pulkinen H, Tiitu V, Kiviranta I, Lammi M, Brunott A, Weeren van R, Brama PA, Jurvelin JS, Linjama A, Toyras J (2009) Quantitative evaluation of spontaneously repaired equine cartilage with minimally invasive ultrasound technique Orthopedic Research Society: 56th Annual Meeting,  
Sinisaari MJ, Rieppo L, Iivarinen J, Brama PA, Jurvelin JS, Saarakkala S, Korhonen RK, Helminen HJ (2009) Depth dependent collagen content, orientation and tensile properties of equine cartilage during growth and maturation Orthopedic Research Society: 56th Annual Meeting,  
Julkunen P, Harjula T, Iivarinen J, Marjanen J, Seppanen K, Narhi T, Arokoski J, Lammi MJ, Brama PA, Helminen HJ, Jurvelin JS (2008) Changes in functional properties of collagen and proteoglycan matrix during rabbit maturation: A study utilizing mechanical indentation and finite element analysis Orthopedic Research Society: 55th Annual Meeting,  
Virpi T, Silvast T, Kiviranta O, Pulkinen H, Lammi M, Brunott A, Brama PA, Kiviranta I (2008) Bone reactions in equine forefeet fetlock joints associated with chondral defects studied with microCT Orthopedic Research Society: 55th Annual Meeting,  
Julkunen P, Harjula T, Iivarinen J, Marjanen J, Seppanen K, Narhi T, Arokoski J, Lammi MJ, Brama PA, Jurvelin JS, Helminen HJ (2008) Maturation of collagen network in rabbit articular cartilage: effect on tissue mechanics Orthopaedic Reseacrh Society: 55th Annual Meeting,  
Professor David Brayden
Ryan, SM, McMorrow, J., Murphy, E.P. & Brayden, D. J. (2009) Salmon calcitonin as a potential therapeutic for osteoarthritis and rheumatoid arthritis 36th Int. Soc. Controlled Release Society, Copenhagen, Abstract 450  
Bzik, V & Brayden DJ (2009) Permeating-enhancing and cytotoxic effects of 1-phenyl piperazine in rat colonic mucosa 36th Int. Soc. Controlled Release Society, Abstract 703  
Wang, X & Brayden, D.J. (2009) Bone regeneration after acute injected bisphophonate and calcitonin repeated treatments in overiectomised rats Osteoporosis Conference 2009, Manchester, Supplement 4, S2  
Professor Stephen Carrington
E. Maischberger, C Cummins, R. Miranda-Casoluengo, W.G. Meijer, S.D. Carrington, V.E. Duggan. M.E. Gallagher and J.A Irwin. (2009) Characterisation and Mucin degradation ability of a bacterial sialidase from Corynebacterium spp isolated from the equine Vagina Mucins in Health and Disease, 10th International Workshop on Carcinoma¿Associated Mucins, Robinson College, Cambridge, CB3 9AN, UK,  
Maeliosa McCrudden, Angeline Smith, Marguerite Clyne, Stephen Carrington, Colm Reid. (2009) The development of a novel system to investigate the role of the miniprotein MUC5AC in pathogen¿mucosal interactions Mucins in Health and Disease, 10th International Workshop on Carcinoma¿Associated Mucins, Robinson College, Cambridge, CB3 9AN, UK,  
Sabkowicz A; Gallagher ME; Carrington SD; Reid C; Irwin JA. (2009) Mucinase gene expression and activities from an epithelial respiratory cell model (BEAS-2B), in healthy and asthmatic environment Mucins in Health and Disease, 10th International Workshop on Carcinoma¿Associated Mucins, Robinson College, Cambridge, CB3 9AN, UK,  
Stephen D Carrington, Anh L Innes, David J. Thornton, Sara Kirkham, Ryan H. Dougherty, Wilfred W. Raymond, George H. Cauighey, Susan J. Muller, John V. Fahy. (2009) Some new perspectives on Mucus gel formation and turnover in the Lung Mucins in Health and Disease, 10th International Workshop on Carcinoma¿Associated Mucins, Robinson College, Cambridge, CB3 9AN, UK,  
Susan McNally, Marguerite Clyne, Stephen Carrington, Colm Reid (2009) Generation of a model system expressing a recombinant Muc2 minigene to investigate the role of the intestinal mucin in mediating Enteric Pathogen interactions with Mucosal surfaces Mucins in Health and Disease, 10th International Workshop on Carcinoma¿Associated Mucins, Robinson College, Cambridge, CB3 9AN, UK,  
Park S-W, Zhen G, Verhaeghe C, Nakagami y, Reid CJ, Carrington, SD (2009) AGR2 is a specialised protein sulphate isomerase with a unique role in mucin production American Thoracic Society Annual Conference,  
Sobkwicz A, Gallagher ME, Carrington S, Reid C, Fahy JV, Irwin JA (2008) An invetigation of enzymatic activities from epithelial repiratory cells (BEAS2B), sputum and broncoalveloar lavage samples in healthy and asthmatic environments Annual Meeting of the society for Glycobiology , Forth Worth, Texas, USA ,  
E Maischberger, JA Irwin, CA Cummins, E FitzPatrick, VE Duggan, SD Carrington, AP Corfield and CJ Reid (2008) Gene expression in the equine reproductive tract ascertained by in-situ hybridisation European Society for Domestic Animal Reproduction - ESDAR , Utrecht, The Netherlands,  
Dr John Connolly
Connolly, J. and Holden, N.M (2009) Detecting disturbance on Irish peatlands British Soil Science Society: Predicting the futurefor highly organic soils,  
Connolly, J. and Holden, N.M. (2009) Defining disturbance for the assessment of the Irish peatland carbon stock European Geosciencs Union (EGU), Vienna,  
Dr Enda Cummins
Tiwari, U and Cummins, E. (2009) A predictive model to compare the factors influencing oat and barley beta-glucan levels in harvested grain 5th CIGR international technical symposium on Food Processing, Monitoring Technology in Bioprocesses and Foodquality Management, Potsdam, Germany, 127  
Coffey R., Cummins E., Bhreathnach N., FlahertyV. O., Cormican M. (2009) Modelling microbial pathogens in agricultural catchments XXXIII CIOSTA-CIGR V Conference, 128  
Kennedy, R. and Cummins E (2009) Development of a quantitative risk assessment with particular reference to cryptosporidium and water treatment for public water supplies in Ireland 3rd Developments in water treatment and supply conference, Cranfield University, 89 - 90  
O'Brien, N. and Cummins E. (2009) Assessing potential human exposure and health hazard to nano-functionalised environmental products and processes: Nano-EXP & Nano-HAZ 19th Environmental Colloquium (Environ'09), Waterford Institute of Technology, 65  
Pavlis, P., Cummins, E. and McDonnell, K. (2009) Conceptual model for the assessment of the vulnerability of ground water to pesticide inputs from Irish agriculture Environ'09, Waterford Institute of Technology, Waterford, Ireland, C16  
Coffey R., Cummins E., Bhreathnach N., Flaherty V. O., Cormican M (2009) Pathogen transport modelling in Irish catchments Environ'09, Waterford Institute of Technology, Waterford, Ireland, 62  
Cummins, E. and Tiwari, U. (2008) Simulation of factors influencing barley beta glucan levels in harvested grain 6th International food convention, CFTRI Campus, Mysore, India, CP32  
Cummins, E. (2008) Food Safety Management 6th International Food Convention, CFTRI Campus, Mysore, India, 1 - 3  
O'Brien, N. and Cummins E. (2008) A risk assessment methodology for evaluating exposure and human health risks from nanoparticles through environmental pathways EPA STRIVE Programme: Fellowship & Scholarship Schemes Seminar, 36  
Curran, T., Blaney, C., Cummins, E., Holden, N., and McDonnell, K. (2008) Development of a problem-based learning module in Biosystems Engineering \i International Conference of Education, Research and Innovation0, Madrid, Spain,  
Coffey R., Cummins E., Bhreathnach N., FlahertyV. O., Cormican M. (2008) Development of a pathogen transport model in an Irish catchment using ArcSWAT EPA Fellowships & Scholarships Seminar 2008, Hilton Kilmainham Hotel, Dublin 8, Ireland, 38  
Adkin, A., Arnold, M., Kosmider, R., Nicholls, V., Matthews, D., Wells, G., Paisley, P., Lind, P., de Vos, C., de Koeijer, A., Hagenaars, T. and Cummins, E. (2008) Modelling EFSA options PrionRisk08, Madrid, Spain, 20 - 21  
Paisley, L., Adkin, A., Arnold, M., De Vos, C., De Koeijer, A., Hagenaars, T., Cummins, E., and Lind, P. (2008) Comparative assessments of the risk of missing BSE test-positive cattle if the minimum age at testing in the healthy slaughter string were raised to 42 months Prion08, Madrid, Spain, 97  
Cummins, E. (2008) Risk assessment of changes to BSE testing strategies for bovines in Ireland Prion08, Madrid, Spain, 94  
Tiwari, U. and Cummins, E. (2008) Simulation of the factors affecting beta glucan levels during the cultivation of oats 38th Annual Research conference, Food Nutrition and Consumer Sciences, UCC, Cork, Ireland, 9  
O'Brien, N. and Cummins E. (2008) A qualitative predictive nanomaterial exposure model resulting from environmental applications 3rd International Conference on the Environmental Effects of Nanoparticles and Nanomaterials, University of Birmingham,  
Dr Thomas Cummins
Johnson, James, Aherne, Julian, Cummins, Thomas, and Farrell, Edward P. (2009) Investigating the influence of storms, droughts and longterm climate trends on humus water in Irish forests Biogeomon, Helsinki,  
Dr Tom Curran
Curran, T., Blaney, C., Cummins, E., Holden, N. and K. McDonnell (2008) Development of a problem-based learning module in Biosystems Engineering International Conference of Education, Research and Innovation, Madrid,  
Mr Florent David
David F, Relave F, Lecoq L, Blond L, Marcoux M, Lavoie JP. (2009) Thoracic ultrasonography, radiography & auscultation for post-operative pneumothorax diagnosis 4th World Equine Airways Symposium, Berne, Switzerland,  
David F, Relave F, Blond L, Lavoie JP. (2009) Thoracic ultrasonography and radiography for detection of induced pneumothorax 4th World Equine Airways Symposium, Berne, Switzerland,  
Relave, F. et al. (2008) Evaluation of a bipolar tissue sealing system to perform thoracoscopic lung biopsy in heaves-affected horses 2008 American College of Veterinary Surgeons Symposium,  
David, F. et al. (2008) Electrosurgical tenoscopic desmotomy of the proximal check ligament in horses 2008 American College of Veterinary Surgeons Symposium,  
David, F. et al. (2008) Evaluation of 2 pre-surgical iodine-based disinfection protocols on the equine foot 2008 American College of Veterinary Surgeons Symposium, San Diego, CA, USA,  
Dr Theo De Waal
MOONEY, L., GOOD, B., HANRAHAN, J.P. & DE WAAL, T., (2009) Efficacy of four fasciolicides against a natural acquired Fasciola hepatica infection in a hill sheep research farm , Ireland 22nd World Association for the Advancement of Veterinary Parasitology, Calgary, Canada,  
RELF, V., GOOD, B., MCCARTHY, E., FORBES, A. & DE WAAL, T., (2009) Fasciola hepatica and Galba truncatula in Ireland 22nd World Association for the Advancement of Veterinary Parasitology, Calgary, Canada, 66  
HALOVÁ, D., RAFTER, P., STUART, P., QUINN, N., ZINTL, A., MULCAHY, G., LAWTON, C., DE WAAL. T., (2009) Toxoplasma gondii in Ireland World Association for the Advancement of Veterinary Parasitology, Calgary, Canada, 129  
RELF, V., GOOD, B., MCCARTHY, E. AND DE WAAL, T. (2009) Identification of a new intermediate host for Fasciola hepatica in Ireland Agricultural Research Forum, Tullamore Court Hotel, Co. Offaly, Ireland, 85  
RELF, V., GOOD, B., MALONE, J. B., MCCARROLL, J. C. AND DE WAAL, T. (2008) Galba truncatula distribution in the west of Ireland 2nd International Symposium on Geospatial Health, New Orleans, U.S.A, 22  
Dr Adriana Edith Delgado
Delgado, A.E. and Sun, D.-W (2008) Use of Power Ultrasound during Immersion Freezing IFCON 2008 - 6th International Food Convention, 15 - 19 December 2008, Mysore, India,  
Mendoza, F., Valous, N.A., Delgado, A.E. and Sun, D.-W. (2008) Evaluation of apple pores and ham fat-connective tissue size distributions using multifractal techniques First European Food Congress. 4-9 November 2008, Ljubljana, Slovenia,  
Dr Ger Jason Devlin
Devlin, G. J. (2009) GPSTRACK and LOADSENSOR  Forest Engineering Group (FEG) Spring Networking Seminar on 11th March 2009, Bray, Co Wicklow,  
Professor Alexander Evans
F Jimenez-Krassel, JK Folger, M Mondal, DM Scheetz, JLH Ireland, GW Smith, F Mossa, P Lonergan, ACO Evans, JJ Ireland. (2009) Evidence that the inherently high variation in ovarian reserves is positively associated with androgen and estradiol production in cattle 42nd Annual Meeting of Society for the Study of Reproduction, Pittsburgh,  
F Mossa, D Kenny, F Jimenez-Krassel, GW Smith, D Berry, S Butler, T Fair, P Lonergan, JJ Ireland, ACO Evans. (2009) Undernutrition of heifers during the first trimester of pregnancy diminishes size of the ovarian reserve in female offspring 42nd Annual Meeting of Society for the Study of Reproduction, Pittsburgh,  
T Swangchan-Uthai, SW Walsh, S Alexander, Z Cheng, MA Crowe, ACO Evans, C Wathes. (2009) Influence of cycle stage and lactation on expression of insulin-like growth factor binding proteins (IGFBPs) in the bovine oviduct 42nd Annual Meeting of Society for the Study of Reproduction,  
N Forde, P Mc Gettigan, JA Browne, B Loftus, J Roche, ACO Evans, P Lonergan, MA Crowe. (2009) Pregnancy specific endometrial gene expression at the initiation of conceptus elongation in cattle 42nd Annual Meeting of Society for the Study of Reproduction, Pittsburgh,  
SW Walsh, JA Browne, MA Crowe, M Mihm and ACO Evans. (2009) Comparison of follicular fluid steroid concentration & mRNA levels in preovulatory follicles between heifers and lactating cows 42nd Annual Meeting of Society for the Study of Reproduction, Pittsburgh,  
L Richardson, JP Hanrahan, A Donovan, S Fair, L O'Hara, M O'Sullivan, P Lonergan, ACO Evans (2009) Sperm penetration and viscosity of cervical mucus in sheep breeds differing in pregnancy rate to cervical AI with frozen thawed semen 42nd Annual Meeting of Society for the Study of Reproduction, Pittsburgh,  
F Mossa, D Kenny, F Jimenez-Krassel, GW Smith, D Berry, ST Butler, T Fair, P Lonergan, JJ Ireland, ACO Evans. (2009) Effect of undernutrition of heifers during the first trimester of pregnancy on blood pressure in female offspring Workshop of the Gemini-cost action working group 1 Experimental models, Lansk, Poland,  

Dr Colette Fagan
Fagan, C.C., Ferreira, T.G., Castillo, M., Payne, F.A., O'Donnell, C.P. and O'Callaghan, D.J. (2009) Vitamin A and tryptophan fluorescence during milk coagulation and curd syneresis ASABE Annual International Meeting, Reno, Nevada, USA, JUNE 21-24   
Mateo, M. J., O'Callaghan, D.J., Everard, C.D., O'Donnell, C.P., Fagan, C.C., Castillo, M. and Payne, F.A. (2008) Determining curd moisture content using an on-line NIR sensor in a cheese vat 38th Annual Research Conference -  Food, Nutrition and Consumer Sciences, Cork, 4 September,  
Dr Alan Fahey
Fahey, A.G., B. Earley, A.K. Kelly, M. McGee, and D.A. Kenny (2009) Immunological response of heifers divergently ranked for residual feed intake follow a bovine corticotropin releasing hormone challenge Agriculture Research Forum, 151 - 151  
McHugh, N., A.G. Fahey, R.D. Evans, and D.P. Berry. (2009) Heritability estimates for weanling price and weights Agriculture Research Forum, Tullamore, Co. Offaly, 118 - 118  
Dr Trudee Fair
Grace M O'Gorman, Shirley Ellis, lonergan P, Trudee Fair. (2009) Characterization of the Non-Classical Major Histocompatibility Complex Class-I Gene (NC1) Promoter in a Bovine Endometrial Cell Line 42nd Annual Meeting of the Society for the Study of Reproduction, Pittsburgh, USA,  
A. Al Naib, S. Mamo, P. Lonergan, T. Fair (2009) Effect of interleukin-1β, -3 and -4 on bovine embryo development in vitro and MHC-I gene expression 35th Annual Conference of the IETS,  
Dr Eileen Gibney
S. O'Brien, E. Feeney, A. Scannell, A. Markey and E.R. Gibney (2009) Are 6-n-propylthiouracil (PROP) taster status and fungiform papillae (FP) density related to alcohol intake in a group of Irish adults? Nutrition Society Summer Meeting 2009,  
E FEENEY, S O'BRIEN, A SCANNEL, A MARKEY AND E R GIBNEY (2009) Perceived sucrose intensity is related to 6-n-Propylthiouracil sensitivity in children and to markers of sugar intake in adults Nutrition Society Summer Meeting 2009,  
E FEENEY, S O'BRIEN, A SCANNEL, A MARKEY AND E R GIBNEY (2009) Associations between 6-n-propylthiouracil (PROP) bitterness, macronutrient intake and variations in bitter-taste receptor gene TAS2R38 Nutrition Society Summer Meeting 2009,  
E DRUMMOND, D O'RIORDAN, JC JACQUIER and ER GIBNEY (2009) The anti-inflammatory effect of three plant polyphenolics found in Irish organic herbs on THP1 macrophages Nutrition Society Summer Meeting 2009,  
S. O'Brien, E. Feeney, A. Scannell, A. Markey and E.R. Gibney (2009) Is TAS2R38 genotype related to micronutrient intake, in a group of Irish adults and children? Nutrition Society Summer Meeting 2009.  

Dr Margherita Gioria 

Gioria, M. and Feehan, J. (2008) Aquatic Coleoptera assemblages in the Irish agricultural landscape EPA Seminar Series 2008, Dublin.   
Gioria, M. and Osborne, B. (2008) Characterising the effects of invasive species on soil seed bank communities: univariate and multivariate techniques 5th European Conference on Biological Invasions - NEOBIOTA - Towards a synthesis, Prague.

Dr Alison J Hanlon
Hanlon AJ, Algers A, Dich T, Hansen T, Loor H, Sandoe P (2009) www.animalethicsdilemma.net: a learning resource for university lecturers in animal sciences & veterinary medicine . In: Kate Millar, Pru Hobson West, Brigitte Nerlich eds. Ethical Futures: bioscience and food horizons. EurSafe 2009, University of Nottingham, UK, 187 - 191  
Olmos, G., Mee, J., Hanlon, A.J., Boyle, A.J. (2008) Do cows at pasture have a more rapid puerperal recovery and better reproductive performance than cows in housing? 12th European Society for Domestic Animal Reproduction,  
Olmos, G., Boyle, L., Mee, J., Murphy, J. & Hanlon, A. (2008) Peripartum health and welfare of Holstein-Friesians in a confinement-TMR system compared to a pasture-based system 4th International Workshop on the Assessment of Animal Welfare at Farm and Group Level, Ghent, Belguim, 47 - 47  
Professor Nick Holden
Tunney, H, Richards, K, Holden, N. M (2009) Mitigation measures to reduce agricultural Nitrogen and Phosphorus losses in Ireland COST Action 869, Working Group 4: Evaluation of projects in example areas: The Swiss Midland Lakes,  
N. M. Holden (2009) Development of a sustainable nutrient management decision support system for Ireland COST Action 869, Working Group 4: Evaluation of projects in example areas: The Swiss Midland Lakes,  
Peng, X., Murphy, T., Holden, N. M. (2009) The transport and attachment of Cryptosporidium parvum oocysts in main Irish soils 18th International Soil Tillage Research Organization,  
Peng, X., Guo, T., McDonald, S. Ziegler, P., Murphy, T., and Holden, N.M. (2009) retention of Cryptosporidium parvum oocysts by structured soil Agricultural Research Forum,  
Samadder, S. R., and Holden, N. M (2009) Environ09 A GIS Approach of Cryptosporidium Risk Assessment of Irish Catchment,  
McDonald, S., Murphy T. and Holden N. M. (2009) Processes affecting Cryptosporidium oocyst survival in Irish agriculture and the environment Environ09,  
McDonald, S., Berzano, M, Ziegler Murphy T. and Holden N. M. (2008) Understanding the agricultural production system in evaluating risk of Cryptosporidium in surface waters SafeFood,  
Peng, X., P. Ziegler, N.M. Holden (2008) The fate and transport of Cryptosporidium parvum in the environment SafeFood,  
T. Curran, C. Blaney, E. Cummins, N. Holden, K. McDonnell (2008) Development of a problem-based learning module in biosystems engineering International Conference on Education, Research and Innovation,  
A. Piwowarczyk, D. Hennessy, K. Richards, J. Murphy, N. M. Holden and J. Connolly (2008) Comparison of methods to composite samples for measuring nitrate leaching using ceramic cups in a large scale filed experiment Teagasc Grassland and EU Water Framework Conference,  
T. Curran, C. Blaney, E. Cummins, N. Holden, K. McDonnell (2008) Development of a problem-based learning module in biosystems engineering \i International Conference on Education, Research and Innovation0, Madrid, Spain,  
Dr Jean-Christophe Jacquier
Niamh B. Harbourne, Jean-Christophe Jacquier and Dolores O¿Riordan, (2008) EFFECT OF PHENOL ADDITION ON ACID MILK GELS IUFOST 2008, Shanghai.China,  
C. Merlin, J. C. Jacquier and D. O¿Riordan (2008) Effect of Chamomile and Meadowsweet aqueous herbal extracts on the sensory properties of blackcurrant juice 38th Annual Research Conference Food, Nutrition and Consumer Sciences, UCC, Cork,  
S. Racault, T. Egan, J.C. Jacquier, D. O¿Riordan and M. O¿Sullivan (2008) Non-Isothermal Degradation of Aspirin in Pharmaceutical Beverages 38th Annual Research Conference Food, Nutrition and Consumer Sciences,  
Goode, H. O¿Sullivan, M. O¿Riordan, D. and Jacquier J.C. (2008) Encapsulation of over the counter drugs with sodium caseinate for use in novel beverages 38th Annual Research Conference Food, Nutrition & Consumer Sciences, UCC, Cork,  
R.I. Alexa, J.S. Mounsey, B.T. O¿Kennedy and J.C. Jacquier (2008) Rheological, microstructural and oxidative stability studies of reduced-fat spreads containing -carrageenan 38th Annual Research Conference Food, Nutrition & Consumer Sciences, UCC, Cork,  
S. J. Brendel, J.C. Jacquier, M. O¿Sullivan and D. O¿Riordan (2008) Soft gels from kappa-carrageenan/sodium caseinate mixtures 38th Annual Research Conference Food, Nutrition & Consumer Sciences, UCC, Cork,  
R.I. Alexa, J.S. Mounsey, B.T. O¿Kennedy and J.C. Jacquier (2008) Effect of milk salts on the viscosity, surface charge, gelation and binding capacity of -carrageenan 38th Annual Research Conference Food, Nutrition & Consumer Sciences, UCC, Cork,  
Egan, T. Goode, H. O¿Dowd, L. O¿Sullivan, M. O¿Riordan, D and Jacquier J.C. (2008) Study of the release kinetics of analgesics encapsulated in a spray-dried 38th Annual Research Conference Food, Nutrition & Consumer Sciences, UCC, Cork,  
Dr Lisa Katz
McGivney BA et al (2009) Digital gene expression profiling of the Thoroughbred horse skeletal muscle transcriptome following exercise conditioning International Physiological Society Conference,  
Murphy BA et al (2009) Identification of a circadian clock in equine skeletal muscle Proceedings of the 8th International Equine Genome Workshop,  
Eivers SS et al (2009) Targets of selection in the Thoroughbred horse (Equus caballus) genome contain genes expressed in skeletal muscle following exercise International Biochemistry of Exercise Conference,  
Fonseca RG et al (2009) The measurement of fat-free mass in a population of two-year-old thoroughbred flat racehorses over their first racing season Proceedings of the 3rd Congress of the European College of Equine Internal Medicine,  
Dr Bridget Lynch
O¿Shea, C.J., M.B. Lynch, J.J. Callan and J.V. O¿Doherty. (2009) Supplementation of high and low crude protein diets with chitosan promotes Enterobacteria in the caecum and colon and subsequently increases manure odour emissions from finisher pigs Proceedings of the 60th Annual Meeting of the Federation of Animal Science, Fira de Barcelona, Barcelon, Spain,  
O¿Shea, C.J., M.B. Lynch, J.J. Callan and J.V. O¿Doherty. (2009) Supplementation of high and low crude protein diets with chitosan promotes Enterobacteria in the caecum and colon and subsequently increases manure odour emissions from finisher pigs Proceedings of the 60th Annual Meeting of the Federation of Animal Science, Fira de Barcelona, Barcelon, Spain,  
O'Shea, C.J., Gahan, D., Lynch, M.B., Callan, J.J. and O'Doherty, J.V. (2009) Effect of β-glucan source and exogenous enzyme supplementation on intestinal fermentation and manure odour and ammonia emissions from finisher boars Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
O'Shea, C.J., Gahan, D., Lynch, M.B., Callan, J.J. and O'Doherty, J.V. 2009 (2009) Effect of supplementation of exogenous β -glucans and enzymes on nutrient digestibility, manure odour and ammonia emissions from finisher boars Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
O'Shea, C.J., Lynch, M.B., Callan, J.J. and O'Doherty, J.V. (2009) Dietary supplementation with chitosan at high and low crude protein concentrations promotes Enterobacteria spp in the caecum and colon and increases manure odour emissions from finisher boars Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
O¿Shea, C.J., M.B. Lynch, J.J. Callan and J.V. O¿Doherty. 2009. (2009) Suppression of Lactobacillus spp. in the colon increases manure odour emissions from finisher pigs Proceeding of the Agricultural Research Forum,  
M. Cristilli, M.B. Lynch, S. Barth, D. McGilloway, D.A. Kenny and T.M. Boland. (2009) Comparison and optimisation of fatty acid extraction methods for high throughput perennial ryegrass sample screening Proceeding of the Agricultural Research Forum,  
M. Cristilli, M.B. Lynch, S. Barth, D. McGilloway, D.A. Kenny and T.M. Boland. (2009) Effect of cutting date and variety on fatty acid levels of perennial ryegrass Proceeding of the Agricultural Research Forum,  
Cotecchia, L., Boland, T.M., Lynch, M.B., McGilloway, D., Mullins, E., Byrne, S., Barth, S. (2009) Investigating the correlation between the fatty acid levels and the expression of candidate genes involved in the fatty acid pathway in perennial ryegrass Proceedings of the Irish Plant Scientists Association,  
Dr James Lyng
Noci, F., Caminiti, I., Munoz, A., Palgan, I., Whyte, P., Morgan, D.J, Cronin, D.A., Lyng, J.G. (2009) High intensity light pulses (HILP) and pulsed electric fields in reconstituted apple juice: effect on the inactivation of Escherichia coli and selected quality attribute Institute of Food Technologists Annual Meeting, Anaheim,  
Palgan, I., I., Caminiti, Munoz, A., Noci, F., Whyte, P., Morgan, D.J., Cronin, D.A., Lyng, J (2008) The effect of ultraviolet (UV) light on microbial inactivation and quality of apple juice European Federation of Food Science and Technology Conference, Ljubliana, Slovenia,  
Munoz, A., Pataro, G., Palgan, I., Noci, F., Whyte, P., Cronin, D.A., Morgan, D.J., Ferrari, G., Lyng, J.G (2008) Effect of High Intensity Light Pulses (HILP) on the survival of Escherichia coli and Listeria innocua in apple juice Innovative applications of non-thermal technologies in foods: technology, safety, health and consumer acceptability,  
McNamee C., Noci, F., Morgan, D., Cronin, D., Lyng, J., Scannell, A.G.M. (2008) Pulse Electric Field Technology Increases Sensitivity of Escherichia coli to Nisaplin® 21st International ICFMH Symposium, Food Micro 2008, Aberdeen, Scotland,  
Warby J.M., Mullane, N.R., N McNamee, C., Byrne, F., Walsh, C., Fanning, S., Lyng, J., Scannell, A.G.M. (2008) Validation of D-value Determination methodology to be used to screen environmental and clinical Enterobacter sakazakii 21st International ICFMH Symposium, Food Micro 2008, Aberdeen, Scotland,  
Dr Bryan Markey
J. Gutierrez, J. O¿Donovan, A.F. Proctor, C. Brady, P.X. Marques, S. Worrall, J.E. Nally, M. McElroy, H. Bassett, D. Sammin, and B.K. Markey. (2009) Development and validation of a multiplex real time PCR for the detection of Chlamydophila abortus and Toxoplasma gondii in sheep First European Meeting on Animal Chlamydioses and Zoonotic aspects, University of Murcia,  
Worrall S., Sammin D., Bassett H., Brady C., Marques P.X., Nally J.E., O¿Donovan J., Fagan J., Williams E.J. and Markey B.K. (2009) ). Interferon-gamma expression in ovine placentomes from sheep experimentally infected with Chlamydophila abortus Annual Conference of the Association of Veterinary Teachers and Research Workers, Scarborough,  
Proctor A., O¿Donovan J., Gutierrez J., Williams E.J., Brady C., Marques P.X., Worrall S., Nally J.E., Bassett H., Sammin D. and. Markey B.K. (2009) Comparison of two serological assays for the detection of antibodies to Toxoplasma gondii in experimentally infected sheep Annual Conference of the Association of Veterinary Teachers and Research Workers, Scarborough,  
Markey B.K., O¿Donovan J., Brady C., Gutierrez J., Marques P.X., Proctor A., Worrall S., Nally J.E., McElroy M., Sammin D., Bassett H. and Williams E.J. (2009) Use of quantitative real time PCR to evaluate shedding and tissue distribution of Chlamydophila abortus during the course of the disease Annual Conference of the Association of Veterinary Teachers and Research Workers, Scarborough,  

Dr Barry John McMahon

McMahon, B.J., Sheridan, H., Kinsella, A. & Purvis, G. (2008) Rapid assessment of bird species richness and diversity within agricultural landscapes using the Field Boundary Fifth Irish Ornithological Research Conference.
Dr Frank Monahan
Lejeune, A., McGettrick, S., Moloney, A.P., Sweeney, T. and Monahan, F.J. (2008) Influence of dietary vitamin E (-tocopherol) on expression of genes involved in vitamin E and lipid metabolism in liver 38th Annual Research Conference - Food, Nutrition and Consumer Sciences, University College Cork, 43 - 43  
Röhrle, F.T., Moloney, A.P., Lejeune, A., Black, A., Sweeney, T., Schmidt, O. and Monahan, F.J. (2008) Vitamin E levels in beef from different production systems and countries 38th Annual Research Conference - Food, Nutrition and Consumer Sciences, University College Cork, 37 - 37  
Dr Francesca Mossa
F Jimenez-Krassel JK Folger, M Mondal, DM Scheetz, JLH Ireland, GW Smith, F Mossa, P Lonergan, ACO Evans, JJ Ireland (2009) Evidence that the inherently high variation in ovarian reserves is positively associated with androgen and estradiol production in cattle 42nd Annual Meeting of the Society for the Study of Reproduction Science for the Public Good,  
F Mossa, D Kenny, F Jimenez-Krassel, GW Smith, D Berry, S Butler, T Fair, P Lonergan, JJ Ireland, ACO Evans (2009) Undernutrition of heifers during the first trimester of pregnancy diminishes size of the ovarian reserve in female offspring 42nd Annual Meeting of the Society for the Study of Reproduction Science for the Public Good, Available Online  

Professor Maarten Nieuwenhuis 

Tene, A., Tobin, B., Ray, D., Black, K. and Nieuwenhuis, M. (2009) Adaptability of forest species to climate change (Abstract) Tree Rings in Archaeology, Climatology and Ecology - annual conference of the Association forTree-ring Research, Otočec, Slovenia,  
Stephen Clifford and Maarten Nieuwenhuis (2009) The development of a decision support system for the integrated management of forests on the western peatlands of Ireland AAG Annual Meeting  

Tene, A., Tobin, B., Gardiner, P., Olajuyigbe, S., Ray, D., Black, K. and Nieuwenhuis, M. (2008) Effects of thinning on stand dynamics - a dendro-ecological perspective (Poster) The European Forest-Based Sector: Bio-Responses to Address New Climate and Energy Challanges, Nancy, France.

Professor John O'Doherty
P. McDonnell, S. Figat, J. J. Callan, J. V. O'Doherty (2009) The effects of increasing the level of rapeseed meal in the diet of the growing-finishing pig on the growth performance and nitrogen and phosphorus excretion American Society of Animal Science Meeting, Montreal, Canada,  
J. V. O'Doherty, S. Dillon, J. J. Callan (2009) The effects of lactose inclusion and seaweed sugars on performance, nutrient digestibility and microbial populations in newly weaned piglets American Society of Animal Science Meeting, Montreal, Canada,  
P. McDonnell, J. V. O'Doherty (2009) The effect of dietary laminarin and fucoidan in the diet of the weanling piglet on performance, selected faecal microbial populations and volatile fatty acid concentrations American Society of Animal Science Meeting, Montreal, Canada,  
P. McDonnell, J. J. Callan, J. V. O'Doherty (2009) The effect of dried distillers grains with solubles in the diet of the growing-finishing pig on performance and nitrogen and phosphorus excretion American Society of Animal Science Meeting, Montreal, Canada,  
O'Shea, C.J., Gahan, D., Lynch, M.B., Callan, J.J. and O'Doherty, J.V. 2009 (2009) Effect of supplementation of exogenous β -glucans and enzymes on nutrient digestibility, manure odour and ammonia emissions from finisher boars Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
A.G. Smith, P. Reilly, T. Sweeney, K.M. Pierce, D.A. Gahan, J.J. Callan and J.V. O¿Doherty (2009) The effects of β-glucan type and enzyme supplementation on the intestinal microbiota and nutrient digestibility in finisher pigs Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
J.V. O¿Doherty, P. McDonnell and S. Figat (2009) The effect of dietary laminarin and fucoidan in the diet of the weanling piglet on performance and selected faecal microbial populations Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
P.F. Varley, P.B. Lynch, J.J. Callan, and J.V. O¿Doherty (2009) Effect of phytase concentration in a low phosphorus weaner pig diet and its subsequent effect on bone development in the finished pig Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
Ryan, M.T., Smith, A.G., Bahar. B., Reilly P., O¿Doherty J.V. and Sweeney, T. (2009) Effects of nutrient supplementation with laminarin derived from Laminaria hyperborea and Laminaria digitata on mucin gene expression in the porcine ileum Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
P.F. Varley, P.B. Lynch, J.J. Callan, and J.V. O¿Doherty (2009) Effect of dietary phosphorus level and phytase inclusion on weaner pig performance and subsequent bone development Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
O'Shea, C.J., Gahan, D., Lynch, M.B., Callan, J.J. and O'Doherty, J.V. (2009) Effect of β-glucan source and exogenous enzyme supplementation on intestinal fermentation and manure odour and ammonia emissions from finisher boars Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
J.V. O¿ Doherty, S. Dillon, S. Figat, J.J. Callan and T. Sweeney (2009) The effects of lactose inclusion and seaweed extract on performance, nutrient digestibility and microbial populations in newly weaned piglets Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
O'Shea, C.J., Lynch, M.B., Callan, J.J. and O'Doherty, J.V. (2009) Dietary supplementation with chitosan at high and low crude protein concentrations promotes Enterobacteria spp in the caecum and colon and increases manure odour emissions from finisher boars Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
Ryan, M.T., Collins, C., O¿Doherty, J.V. and Sweeney, T. (2009) Selection of stable endogenous control genes for real-time PCR in TS1 and TS2 challenged porcine gastrointestinal tissues Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
S.G. Leonard, T. Sweeney, K.M. Pierce, B. Bahar, B.P. Lynch and J.V. O¿Doherty (2009) The effects of supplementing the diet of the sow with seaweed extracts and fish oil on aspects of gastrointestinal health and performance of the weaned piglet Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
S.G. Leonard, T. Sweeney, K.M. Pierce, B. Bahar, B.P. Lynch and J.V. O¿Doherty (2009) The effects of maternal dietary supplementation with seaweed extract and fish oil on the humoral immune response and performance of suckling piglets Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
P.F. Varley, J.J. Callan, and J.V. O¿Doherty (2009) Effect of crude protein and phosphorus level in a phytase supplemented grower finisher pig diet on phosphorus and calcium metabolism Proceedings of XI International Symposium on Digestive Physiology of Pigs, Montbrio del Camp, Costa Daurauda, Spain,  
J.V. O' Doherty (2008) Processing and enzyme supplementation of cereal grains for pigs Western Canadian nutrition conference,  
Dr Colm O'Donnell
Gowen, A.. and O'Donnell C.P. (2009) hyperspectral Imaging CIGR Image Analysis for Agricultural Products and Processes  Workshop, Aug 27 to 28, Potsdam, Germany,  
Mateo, M.J., Everard, C.D., O'Donnell, C.P., Castillo, M., Payne, F.A. and O'Callaghan, D.J. (2009) An on-line light backscatter sensor at 980 nm for monitoring curd moisture and whey solids contents with a cooking step during syneresis in a cheese vat Joint ADSA, CSAS and ASAS Annual Meeting, Montreal, Quebec, Canada,  July 12 – 16,  
Gowen, A., O'Donnnell, C. (2009) Hyperspectral image analysis: comparison of chemometric and band ratio approaches ASABE ANNUAL INTERNATIONAL MEETING, June 21-June 24, Reno, Nevada,  
Gaston, E., Frias, J.M., Cullen, P.J., O'Donnell, C.P. and Gowen, A.A. (2009) Hyperspectral imaging for the detection and discrimination of brown blotch disease on Agaricus bisporus mushroom caps Institute of Food Technologists Annual Meeting (IFT09), Anaheim, CA, USA, June 6 - 9,  
Tiwari, B.K., O'Donnell, C.P., Muthukumarappan, K. and Cullen, P.J. (2009) Rheological characteristics of ozonated pectin dispersions 15th Gums & Stabilisers for the Food Industry Conference, June 22nd - 25th, Wrexham, UK,  
Fagan, C.C., Ferreira, T.G., Castillo, M., Payne, F.A., O'Donnell, C.P. and O'Callaghan, D.J. (2009) Vitamin A and tryptophan fluorescence during milk coagulation and curd syneresis ASABE Annual International Meeting, Reno, Nevada, USA, JUNE 21-24   ,  
Tiwari, B., O'Donnell, C.P., Brunton, N., Patras, A., Cullen, P.J. (2009) Effect of sonication on the colour and anthocyanin content of grape juice Institute of Food Technologists Annual Meeting (IFT09), Anaheim, CA, USA, June 6 - 9,  
Gowen, A. and O'Donnell, C.P. (2009) Algorithm development for detection of mechanical injury on white mushrooms (Agaricus bisporus) using hyperspectral imaging SPIE Defense, Security, and Sensing, 13 - 17 April , Orlando, Florida, USA,  
A.A. Gowen, C.P. O'Donnell, C. Esquerre and G. Downey (2009) An investigation into the effects of polymer packaging films on hyperspectral imaging data European Association for Spectral Imaging Conference (EASIM-09), 3-4 March, Gembloux, Belgium,  
Tiwari, B.K., O'Donnell, C.P., Muthukumarappan, K, Cullen, P.J. (2008) Effect of acoustic energy density on particle size distribution of orange juice Sixth International Food Convention (IFCON 2008), Mysore, India 15 - 19 December,  
O'Donnell, C.P. (2008) Recent developments in process analytical technology for the food industry (Invited lecture) Sixth International Food Convention (IFCON 2008), Mysore, India 15 - 19 December,  
Tiwari, B.K., O' Donnell, C.P. and Cullen, P.J. (2008) Effect of ozone treatment on quality of fruit and vegetable juices (Paper O15.2) First European Food Congress, Ljubljana, Slovenia, 4 - 9 November,  
Taghizadeh, M., Gowen, A. and O'Donnell, C.P. (2008) Identification of cross contamination caused by packaging materials in peanut butter using hyperspectral imaging First European Food Congress, Ljubljana, Slovenia, 4 - 9 November,  
Tiwari, B.K., O'Donnell, C.P., Muthukumarappan, K., and Cullen, P.J. (2008) Enhancement of cloud stability of orange juice using power ultrasound Innovative Applications of Nonthermal Technologies in Food: Technology, Safety, Health and Consumer Acceptability, Madrid, Spain 19 - 22 November,  
Gaston, E., Frias, J. M., Cullen, P. J., Gowen, A. A., Taghizadeh, M. and O'Donnell C. P.. (2008) The effect of mechanical damage on the kinetics of PPO activity and correlation with hyperspectral imaging 38th Annual Research Conference -  Food, Nutrition and Consumer Sciences, Cork, 4 September,  
Mateo, M. J., O'Callaghan, D.J., Everard, C.D., O'Donnell, C.P., Fagan, C.C., Castillo, M. and Payne, F.A. (2008) Determining curd moisture content using an on-line NIR sensor in a cheese vat 38th Annual Research Conference -  Food, Nutrition and Consumer Sciences, Cork, 4 September,  
Taghizadeh, M., Gowen, A. and O'Donnell, C.P. (2008) Early detection of freeze damage on mushrooms using a hyperspectral imaging system 38th Annual Research Conference -  Food, Nutrition and Consumer Sciences, Cork, 4 September,  
Dr Emma O'Neill
I.Berzina, A.Lawlor, A.Blanco, E.O¿Neill, P.F.Moore, P.J. O¿Brien (2008) Immunophenotyping Canine Lymphocytes with a Cost-effective Personal Flow-Cytometer (Guava EasyCyte Plus) European College of Veterinary Clinical Pathology annual conference, Barcelona, Spain,  
Professor Dolores O'Riordan
Arimi, J, Duggan, E., Lyng, G, O'Sullivan, M and O'Riordan D. (2009) Properties of a microwave expanded imitation cheese: mechanical, acoustic and sensory analysis European workshop on Food Engineering and Technology,  
O'Riordan, ED (2008) The challenges of devloping foods with health benefits International Conference of Nutritionists society,  
Goode H., O¿Sullivan M., O¿Riordan D. and Jacquier J. C (2008) Encapsulation of over the counter drugs with sodium caseinate fri use in novel beverages 38th annual research conference Food Nutrition and Consumer science,  
Harbourne, N., Jacquier, JC and O'Riordan, ED (2008) Effect of phenol adition on acid milk gels World Congress of Food Science and Technology,  
M. El-Bakry, E. Duggan, E.D. O¿Riordan and M. O¿Sullivan (2008) Low Sodium Process Cheese Manufacture First European Food Conference,  
El-Bakry M., Duggan E., O¿Riordan E.D. and O¿Sullivan M. (2008) Manufacture of Process Cheese with Reduced Sodium Levels 38th Research ConferenceFood Nutrition and Consumer Science,  
Mark Hynes, Elaine Duggan, Dolores O¿Riordan and Michael O¿Sullivan (2008) Effect of glycerol on functional properties of imitation cheese 38th Research ConferenceFood Nutrition and Consumer Science,  
S. J. Brendel, J.C. Jacquier, M. O¿Sullivan and D. O¿Riordan (2008) Soft gels from Kappa-carrageenan/ Sodium-caseinate mixtures 38th annual research conference Food Nutrition and Consumer science,  
El-Bakry M., Duggan E., O'Riordan E.D. and O'Sullivan M. (2008) Imitation Cheese Manufacture in a Semi-Micro Model System  38th Research ConferenceFood Nutrition and Consumer Science,  
Dr Grainne Redmond
Gonzales Barron, U., Soumpasis, I., Redmond, G. and Butler, F. (2009) Modelling Salmonella levels in Irish raw pork sausages: Transport and refrigeration modules 21st ISEE Conference Food, Environment and Global Health, Dublin, Ireland,  
Dr Marion Ryan
M.T. RYAN, C. COLLINS, J. O' DOHERTY, T. SWEENEY (2009) Selection of stable endogenous control genes for real-time PCR in TH1 and TH2 challenged porcine gastrointestinal tissues XI International symposium on digestive physiology of pigs,  
C.A. KENNEDY, M. LENEHAN, M. RYAN, S. FANNING, J. SHERIDAN, T. SWEENEY (2009) Shiga toxin-producing Escherichia coli isolated from human and pig origin induce different gene expression profiles in human epithelial cells XI International symposium on digestive physiology of pigs,  
A.G. SMITH, M.T. RYAN, P. REILLY, B. BAHAR, J.V. O' DOHERTY, T. SWEENEY (2009) Effects of dietary supplementation with laminarin derived from L. hyperborea and L. digitata on colonic mucin gene expression in finisher pigs XI International symposium on digestive physiology of pigs,  
M.T. RYAN, A.G. SMITH, B. BAHAR, P. REILLY, J.V. O¿DOHERTY, T. SWEENEY (2009) Effects of nutrient supplementation with laminarin derived from L. hyperborea and L. digitata on mucin gene expression in the porcine ileum XI International symposium on digestive physiology of pigs,  
Dr Amalia Scannell
Warby J.M.., Walsh C., Fanning, S., Scannell, A.G.M. (2008) Thermal Death Kinetics of Enterobacter sakazakii at 60˚C in reconstituted Infant Formula Milk 21st International ICFMH Symposium, Food Micro 2008, Aberdeen, Scotland,  
Warby J.M. Walsh, C., Fanning, S., Scannell, A.G.M. (2008) Osmo-tolerance of Enterobacter sakazakii Strains using Phenotype Micro-Array Analysis 21st International ICFMH Symposium, Food Micro 2008, Aberdeen, Scotland,  
McNamee C., Noci, F., Morgan, D., Cronin, D., Lyng, J., Scannell, A.G.M. (2008) Pulse Electric Field Technology Increases Sensitivity of Escherichia coli to Nisaplin® \i 21st International ICFMH Symposium,0 Food Micro 2008, Aberdeen, Scotland, Sept 1-4 2008.0,  
Byrne F., Farag, K., Muňoz, A., Morgan, D., Cronin, D., Lyng., J., Scannell, A.G.M. (2008) Safety of Radio Frequency Tempered Beef Emulsions 21st International ICFMH Symposium, Food Micro 2008, Aberdeen, Scotland,  
Warby J.M., Mullane, N.R., N McNamee, C., Byrne, F., Walsh, C., Fanning, S., Lyng, J., Scannell, A.G.M. (2008) Validation of D-value Determination methodology to be used to screen environmental and clinical Enterobacter sakazakii 21st International ICFMH Symposium, Food Micro 2008, Aberdeen, Scotland,  
Professor Da-Wen Sun
Da-Wen Sun (2009) Hyperspectral Imaging for Food Quality Evaluation 1st International Workshop on Computer Image Analysis in Agriculture (Keynote speech), Potsdam, Germany,  
A. Iqbal, N. A. Valous, F. Mendoza, P. Allen and Da-Wen Sun (2009) Pork and Turkey Hams Classification from Colour and Textural Features Using Computer Vision 5th International Symposium of CIGR Section VI on Food Processing, Monitoring Technology in Bioprocesses and Food Quality Management, Potsdam, Germany,  
Da-Wen Sun (2009) Innovative Food Freezing Processes 3rd International Congress on Food and Nutrition (Invited speech), Antalya, Turkey,  
Da-Wen Sun (2009) Hyperspectral Imaging Technology for Food Quality and Safety Evaluation and Inspection 5th International Symposium of CIGR Section VI on Food Processing, Monitoring Technology in Bioprocesses and Food Quality Management (Plenary lecture), Potsdam, Germany,  
N. A. Valous, F. Mendoza and Da-Wen Sun (2009) Use of Lacunarity for Characterization of Pork Ham Slice Surfaces from Digital Binary Images 5th International Symposium of CIGR Section VI on Food Processing, Monitoring Technology in Bioprocesses and Food Quality Management, Potsdam, Germany,  
P. Jackman, Da-Wen Sun, P. Allen, K. Brandon, and A.-M. White (2009) Prediction of Consumer Panel Assessment of Beef Palatability from Digital Image Features 5th International Symposium of CIGR Section VI on Food Processing, Monitoring Technology in Bioprocesses and Food Quality Management,  
K. S. Bravo, O. McNerney, Da-Wen Sun, and C. Krines (2009) Method for Improving the Quality of Frozen Foods by Assisting the Freezing Process and Reducing the Size of the Ice Crystals MINICRYATAL 3rd International Congress on Food and Nutrition, Antalya, Turkey,  
A. Iqbal, N. A. Valous, F. Mendoza, P. Allen and Da-Wen Sun (2009) Turkey Hams: Evaluation and Technological Relevance of Sensory and Objective Data 1st International Conference Sustainable Postharvest and Food Technologies - INOPTEP 2009 and XXI National Conference Processing and Energy in Agriculture - PTEP 2009, Divcibare, Serbia,  
X. Wang, A. Al Naib, Da-Wen Sun and P. Lonergan (2009) Membrane Permeability Characteristics of Bovine Oocytes in the Presence of Different Cryoprotectants Proceedings of the 35th Annual Conference  of the IETS, San Diego, California, USA,  
T. Norton, J. Grant, R. Fallon and Da-Wen Sun (2008) A Computational Fluid Dynamics Approach to Predicting the Ventilation Efficiency and Thermal Comfort in Naturally Ventilated Livestock Buildings Proceedings of AgEng2008 - International Conference on Agricultural Engineering & Industry Exhibition, 23 - 25 June 2008, Hersonissos, Crete, Greece,  
A. E. Delgado, L. Y. Zheng and Da-Wen Sun (2008) Influence of Different Parameters on Freezing Rate during Ultrasound-Assisted Freezing Proceedings of AgEng2008 - International Conference on Agricultural Engineering & Industry Exhibition, Hersonissos, Crete, Greece,  
N. A. Valous, F. Mendoza and Da-Wen Sun (2008) Colour Calibration of Computer Vision Systems for Applications in Agricultural Foods Proceedings of AgEng2008 - International Conference on Agricultural Engineering & Industry Exhibition, Hersonissos, Crete, Greece,  
N. A. Valous, F. Mendoza, A. Delgad, Da-Wen Sun (2008) Colour Characterization of Digital Camera and Flatbed Scanner Using Polynomial Transforms Proceedings of IFCON 2008 - 6th International Food Convention, 15 - 19 December 2008, Mysore, India,  
Da-Wen Sun (2008) Recent Research Advances of Computational Fluid Dynamics (CFD) Applications in the Food Industry Proceedings of IFCON 2008 - 6th International Food Convention (Plenary lecture), Mysore, India,  
A. E. Delgado and Da-Wen Sun (2008) Use of Power Ultrasound during Immersion Freezing of Melons Proceedings of IFCON 2008 - 6th International Food Convention (Invited speech), Mysore, India,  
Da-Wen Sun (2008) Advanced Applications of Computational Fluid Dynamics (CFD) in the Food Industry Proceedings of 10th International Congress on Mechanization and Energy in Agriculture  (Keynote speech), Antalya, Turkey,  
A. E. Delgado and Da-Wen Sun (2008) Factors Affecting the Freezing Rate during Ultrasound Assisted Freezing Proceedings of the 2nd CIGR International Conference of Agricultural Engineering / 4th CIGR Section VI International Symposium on Food and Bioprocess Technology, Iguassu Falls City, Brazil,  
S. F. Yu, Y. Ma and Da-Wen Sun (2008) Effects of Storage Temperature and Time on the Staling of Cooked Rice Proceedings of the 2nd CIGR International Conference of Agricultural Engineering / 4th CIGR Section VI International Symposium on Food and Bioprocess Technology, Iguassu Falls City, Brazil,  
F. Mendoza, N. A. Valous, A. E. Delgado and Da-Wen Sun (2008) Evaluation of Apple Pores and Ham Fat-Connective Tissue Size Distributions using Multifractal Techniques Proceedings of EFFOST 2008  -  First European Food Congress, 4 - 9 November 2008, Ljubljana, Slovenia,  
F. Mendoza, N. A. Valous and Da-Wen Sun (2008) Colour Camera Caracterization of a Computer Vision System for Quality Evaluation of Commercial Ham Slices Proceedings of the 2nd CIGR International Conference of Agricultural Engineering / 4th CIGR Section VI International Symposium on Food and Bioprocess Technology, Iguassu Falls City, Brazil,  
P. Jackman, Da-Wen Sun and P. Allen (2008) Prediction of Beef Palatability from Digital Image Features Proceedings of the 2nd CIGR International Conference of Agricultural Engineering / 4th CIGR Section VI International Symposium on Food and Bioprocess Technology, Iguassu Falls City, Brazil,  
Da-Wen Sun (2008) Emerging Technologies In Food Freezing Proceedings of the 2nd CIGR International Conference of Agricultural Engineering / 4th CIGR Section VI International Symposium on Food and Bioprocess Technology (Specific Lecture), Iguassu Falls City, Brazil,  

Dr Olaf Schmidt

Monahan F, Moloney A, Bahar B, Harrison S, Zazzo A, Schmidt O (2009) Meat authentication -- What did the animal eat? 55th International Congress of Meat Science and Technology, Copenhagen, 40 - 43  

Hoekstra N, Richards K, Schmidt O (2009) The effect of application method on slurry 15NH4-N recovery in herbage and soil . In: Grignani C, Acutis M, Zavattaro L, Bechini L, Bertora C, Marino Gallina P, Sacco D eds. Proceedings of the 16th Nitrogen Workshop: Connecting different scales of nitrogen use in agriculture, Turin, Italy, 53 - 54

Dr Helen Sheridan 

Fritch, R., Sheridan, H., O hUallachain, D., Finn, J., Feehan, J. (2009) Enhancing plant diversity within field margins in intensive grassland The Agricultural Research Forum,  
Fritch, R., Sheridan, H., O hUallachain, D., Finn, J., Feehan, J. (2009) Measuring biodiversity of grassland field margins 19th Irish Environmental Researchers Colloquium,  

Fritch, R., Sheridan, H., O hUallachain, D., Finn, J., Feehan, J. (2008) Enhancing plant diversity within intensive grassland using experimental field margins Annual Meeting of the British Ecological Society.

Mr Brijesh Tiwari
Tiwari, B.K., O'Donnell, C.P. and Muthukumarappan, K. and Cullen, P.J (2008) Effect of acoustic energy density on particle size distribution of orange juice International Food Convention 2008,  
Tiwari BK, O' Donnell CP, Muthukumarappan K, Cullen PJ (2008) Effect of acoustic energy density on particle size International Food Convention, India, Available Online  
Tiwari, B.K., O'Donnell, C.P and Cullen, P.J. (2008) Effect of ozone treatment on quality of fruit & vegetable juices First European Food Congress, Ljubljana, Slovenia,  
Tiwari BK, O'Donnell CP, Muthukumarappan K, and Cullen PJ (2008) Enhancement of cloud stability of orange juice using power ultrasound Innovative Applications of Nonthermal Technologies in Foods, Madrid, Spain,  
Dr Paul Whyte
Mullowney, P, Barret, D., Fallon, R., Egan, J., More, S., Whyte, P., Good, M (2009) A government subsidised herd health pilot programme for Johnes Disease: Five years progress (2004-2009) Proceedings of the 2nd Para Tuberculosis Forum, Minnesota, 1 - 7  
Palgan, I., Munoz, A., Pataro, G., Noci, F., Whyte, P., Cronin, D.A., Morgan, D.J., Ferrari, G., Lyng, J.G (2009) Inactivation of E. coli and L. innocua by high intensity light pulses (HILP) in orange juice Institute of Food Technologists Annual Meeting, Anaheim,  
Noci, F., Caminiti, I., Munoz, A., Palgan, I., Whyte, P., Morgan, D.J, Cronin, D.A., Lyng, J.G. (2009) High intensity light pulses (HILP) and pulsed electric fields in reconstituted apple juice: effect on the inactivation of Escherichia coli and selected quality attribute Institute of Food Technologists Annual Meeting, Anaheim,  
Acke, E., McGill, K., Jones, B., Fanning, S., Whyte, P (2009) The role of pets as a reservoir for human campylobacteriosis American College of Veterinary Internal Medicine Forum and Canadian Veterinary Medical Association Convention, Montreal Quebec,  
Thomas, K.M., McCann, M.S., O¿Brien, S., Logan, A., Whyte, P., McDowell, D.A., Duffy, G (2009) Tracking verocytotoxigenic Escherichia coli O157, O111, O26, O103 and O145 in Irish cattle EU ProSafeBeef Conference,  
Munoz, A., Pataro, G., Palgan, I., Noci, F., Whyte, P., Cronin, D.A., Morgan, D.J., Ferrari, G., Lyng, J.G (2008) Effect of High Intensity Light Pulses (HILP) on the survival of Escherichia coli and Listeria innocua in apple juice Innovative applications of non-thermal technologies in foods: technology, safety, health and consumer acceptability,  
Palgan, I., I., Caminiti, Munoz, A., Noci, F., Whyte, P., Morgan, D.J., Cronin, D.A., Lyng, J (2008) The effect of ultraviolet (UV) light on microbial inactivation and quality of apple juice European Federation of Food Science and Technology Conference, Ljubliana, Slovenia,  
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Published Reports
Professor Ronan Gormley
Gormley, T.R. (2008) Overview of seafood research at Ashtown Food Research Centre. Teagasc, Dublin.  
Dr Máirtín Mac Siúrtáin
Phillips, H., J. Redmond, M. Mac Siúrtáin and A. Nemesova, (2009) Roundwood production from private sector forests 2009-2028. A geospatial forecast. COFORD, Dublin. Available Online  
Dr Gordon Purvis
Purvis G., Anderson, A., Baars, J-R., Bolger, T., Breen, J., Connolly, J., Curry, J.P., Doherty, P., Doyle, M., Finn, J., Geijzendorffer, I., Helden, A., Kelly-Quinn, M., Kennedy, T., Kirwan, L., McDonald, J., McMahon, B.J., Miksche, D., Santorum, V., Schmidt, O., Sheehan C. & Sheridan, H. (2009) Ag-Biota: Biodiversity - Monitoring, Functional Significance and Management for the Maintenance and Economic Utilisation of Biodiversity in the Intensively Farmed Landscape: Synthesis Research Report (2001-CD/B1-M1); STRIVE Report Series no. 21; 63 pp. Environmental Protection Agency, Johnstown Castle, Co. Wexford. Available Online  
Purvis G., Anderson, A., Baars, J-R., Bolger, T., Breen, J., Connolly, J., Curry, J.P., Doherty, P., Doyle, M., Finn, J., Geijzendorffer, I., Helden, A., Kelly-Quinn, M., Kennedy, T., Kirwan, L., McDonald, J., McMahon, B.J., Miksche, D., Santorum, V., Schmidt, O., Sheehan C. & Sheridan, H. (2009) Biodiversity - Monitoring, Functional Significance and Management for the Maintenance and Economic Utilisation of Biodiversity in the Intensively Farmed Landscape; Full Final Research Report (2001-CD/B1-M1); Environmental Protection Agency, Dublin; 401 pp. Environmental Protection Agency, Johnstown Castle, Co. Wexford.  

Dr Helen Sheridan

Purvis G., Anderson, A., Baars, J-R., Bolger, T., Breen, J., Connolly, J., Curry, J.P., Doherty, P., Doyle, M., Finn, J., Geijzendorffer, I., Helden, A., Kelly-Quinn, M., Kennedy, T., Kirwan, L., McDonald, J., McMahon, B.J., Miksche, D., Santorum, V., Schmidt, O., Sheehan C. & Sheridan, H. (2009) Ag-Biota: Biodiversity - Monitoring, Functional Significance and Management for the Maintenance and Economic Utilisation of Biodiversity in the Intensively Farmed Landscape Synthesis Research Report (2001-CD/B1-M1). Environmental Protection Agency, Dublin.
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