'Tasty beads'. Image by Juan Varela.
UCD School of Chemistry & Chemical Biology - Research Publications 2008/09
Below is the list of research publications for the UCD School of Chemistry & Chemical Biology in the academic year 2008/09
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| Professor Martin Albrecht | |
| M. Albrecht, D. Morales-Morales (2009) 'Pincer-Type Iridium Complexes for Organic Transformations' In: L. A. Oro, C. Claver (eds). Iridium Complexes in Organic Synthesis. Weinheim: Wiley-VCH. | |
| Professor Patrick Guiry | |
M. O. Fitzpatrick; A. G. Coyne; P. J. Guiry, (2009) 'Ligand Design for the Intermolecular Asymmetric Heck Reaction' In: Martin Oestrich (eds). The Mizoroki-Heck Reaction. Chichester, United Kingdom: Wiley.  |
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| Professor Martin Albrecht | |
| M. Heckenroth, A. Neels, M. G. Garnier, P. Aebi, A. Ehlers, M. Albrecht (2009) 'On the Electronic Impact of Abnormal C4-Bonding in N-Heterocyclic Carbene Complexes'. Chemistry - A European Journal, 15 . | |
| C. Gandolfi, M. Heckenroth, A. Neels, G. Laurenczy, M. Albrecht (2009) 'Chelating NHC Ruthenium(II) Complexes as Robust Homogeneous Hydrogenation Catalysts'. Organometallics, 28 . | |
| L. Mercs, A. Neels, H. Stoeckli-Evans, M. Albrecht (2009) 'Main-Chain Organometallic Polymers Comprising Redox-Active Iron(II) Centers Connected by Ditopic N-Heterocyclic Carbenes'. Dalton Transactions, . | |
| O. B. Schuster, L. Yang, H. G. Raubenheimer, M. Albrecht (2009) 'Beyond Conventional N-Heterocyclic Carbenes: Abnormal, Remote, and Other Classes of NHC Ligands with Reduced Heteroatom Stabilization'. Chemical Reviews, 109 . | |
| G. Venkatachalam, M. Heckenroth, A. Neels, M. Albrecht (2009) 'Synthesis, Structural Diversity, and Ligand Transfer Potential of Copper(I) Carbene Complexes'. Helvetica Chimica Acta, 92 . | |
| M. Albrecht, K. J. Cavell (2009) 'Abnormal NHCs: Coordination, Reaction Chemistry and Catalytic Applications'. Organometallic Chemistry, 35 . | |
| A. Poulain, A. Neels, M. Albrecht (2009) 'Palladium Complexes Comprising Potentially Chelating Pyridylidene-Type Carbene Ligands'. European Journal of Inorganic Chemistry, 2009 . | |
| M. Albrecht (2009) 'Abnormal Carbenes as Ligands in Transition Metal Chemistry: Curiosities with Exciting Perspectives'. Chimia, 63 . | |
| M. Heckenroth, E. Kluser, A. Neels, M. Albrecht (2008) 'Palladation of diimidazolium salts at the C4 position: Access to remarkably electron-rich palladium(II) centers'. Dalton Transactions, . | |
| C. Gandolfi, C. Moitzi, P. Schurtenberger, G. G. Morgan, M. Albrecht (2008) 'Improved Cooperativity of Spin-Labile Iron(III) Centers by Self-Assembly in Solution'. Journal of the American Chemical Society, 130 . | |
| P. Mathew, A. Neels, M. Albrecht (2008) '1,2,3-Triazolylidenes as Versatile Abnormal Carbene Ligands for Late Transition Metals'. Journal of the American Chemical Society, 130 . | |
| L. Mercs, A. Neels, M. Albrecht (2008) 'Probing the Potential of N-Heterocyclic Carbenes in Molecular Electronics: Redox-Active Metal Centers Interlinked by a Rigid Ditopic Carbene Ligand'. Dalton Transactions, . | |
| Professor Kenneth A Dawson | |
| Gallagher WM, Miller IS, Lynch I, Dowling D, Dawson KA, (2009) 'Surface-induced cell signaling events control actin rearrangements and motility'. Journal of Biomedical Materials Research Part A . | |
| Cedervall T, Hellstrand E, Lynch I, Andersson A, Drakenberg T, Dahlbäck B, Dawson KA, Linse S, (2009) 'Complete high-density lipoproteins in nanoparticle corona'. FEBS JOURNAL, 276 (12):3372-3381. | |
| Janssen CR, Van Hoecke K, Quik JT, Mankiewicz-Boczek J, De Schamphelaere KA, Elsaesser A, Van der Meeren P, Barnes C, McKerr G, Howard CV, Van de Meent D, Rydzyſski K, Dawson KA, Salvati A, Lesniak A, Lynch I, Silversmit G, De Samber B, Vincze L, (2009) 'Fate and effects of CeO2 nanoparticles in aquatic ecotoxicity tests'. Environmental Science &Amp; Technology, 43 (12):4537-4546. | |
| Davoren M, Naha PC, Casey A, Tenuta T, Lynch I, Dawson KA, Byrne HJ, (2009) 'Preparation, characterization of NIPAM and NIPAM/BAM copolymer nanoparticles and their acute toxicity testing using an aquatic test battery'. Aquatic toxicology (Amsterdam, Netherlands), 92 (3):146-154. | |
| Dawson KA, Slavov N, (2009) 'Correlation signature of the macroscopic states of the gene regulatory network in cancer'. Proceedings of the National Academy of Sciences of the United States of America, 106 (11):4079-4084. | |
| Lynch I, Dawson KA, Salvati A, (2009) 'Nanotoxicology: nanoparticles reconstruct lipids'. Nature nanotechnology, 4 (2):84-85. | |
| Linse S, Cabaleiro-Lago C, Quinlan-Pluck F, Lynch I, Lindman S, Minogue AM, Thulin E, Walsh DM, Dawson KA, (2008) 'Inhibition of amyloid beta protein fibrillation by polymeric nanoparticles'. Journal of the American Chemical Society, 130 (46):15437-15443. | |
| Linse S, Cabaleiro-Lago C, Quinlan-Pluck F, Lynch I, Lindman S, Minogue AM, Thulin E, Walsh DM, Dawson KA, (2008) 'Inhibition of amyloid beta protein fibrillation by polymeric nanoparticles'. Journal of the American Chemical Society, 46 (NA):15437-15443. | |
| Howard CV, Barnes CA, Elsaesser A, Arkusz J, Smok A, Palus J, Lesniak A, Salvati A, Hanrahan JP, Jong WH, Dziubaltowska E, Stepnik M, Rydzynski K, McKerr G, Lynch I, Dawson KA, (2008) 'Reproducible comet assay of amorphous silica nanoparticles detects no genotoxicity'. Nano letters, 8 (9):3069-3074. | |
| Martin Lundqvist, Johannes Stigler, Giuliano Elia, Iseult Lynch, Tommy Cedervall, and Kenneth A. Dawson (2008) 'Nanoparticle size and surface properties determine the protein corona with possible implications for biological impacts'. Proceedings of the National Academy of Sciences of the United States of America, 38 (NA):14265-14270. | |
| Dr Paul Evans | |
| Evans P, Klein JE, Müller-Bunz H, (2009) 'Studies concerning the electrophilic amino-alkene cyclisation for the synthesis of bicyclic amines'. Organic &Amp; Biomolecular Chemistry, 7 (5):986-995. | |
| Y. Kavanagh, C. M. Chaney, J. Muldoon and P. Evans (2008) 'Iridium Catalyst Mediated Isomerisation-Cyclisation of Pauson-Khand Derived Bicyclic Allylic Alcohols'. Journal of Organic Chemistry, 73 . | |
| J. Klein, H. Müller-Bunz, Y. Ortin and P. Evans (2008) 'Formation of Cyclic Sulfonamides via an Unusual 8-endo -trig Heck Olefination Reaction0'. Tetrahedron Letters, 49 . | |
| Professor Patrick Guiry | |
| Fitzpatrick, M. O.,Muller-Bunz, H.,Guiry, P. J. (2009) 'The Synthesis of New HetPHOX Ligands and Their Application to the Intermolecular Asymmetric Heck Reaction'. European Journal of Organic Chemistry, (12):1889-1895. |
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| Singh, S.,Guiry, P. J. (2009) 'A Facile Synthesis of Both Enantiomers of 6-Acetoxy-5-hexadecanolide, a Major Component of Mosquito Oviposition Attractant Pheromones'. European Journal of Organic Chemistry, (12):1896-1901. |
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| Guiry PJ, Singh S, (2009) 'Microwave-assisted synthesis of substituted tetrahydropyrans catalyzed by ZrCl4 and its application in the asymmetric synthesis of exo- and endo-brevicomin'. Journal of Organic Chemistry, 74 (15):5758-5761. | |
| Guiry PJ, Fleming WJ, Müller-Bunz H, Lillo V, Fernández E, (2009) 'Axially chiral P-N ligands for the copper catalyzed beta-borylation of alpha,beta-unsaturated esters'. Organic and Biomolecular Chemistry, 7 (12):2520-2524. | |
| Guiry PJ, Hargaden GC, (2009) 'Recent applications of oxazoline-containing ligands in asymmetric catalysis'. Chemical Reviews, 109 (6):2505-2550. | |
| Guiry PJ, Coeffard V, Müller-Bunz H, (2009) 'The synthesis of new oxazoline-containing bifunctional catalysts and their application in the addition of diethylzinc to aldehydes'. Organic and Biomolecular Chemistry, 7 (8):1723-1734. | |
| Guiry PJ, Shah ST, Singh S, (2009) 'A Novel, Chemoselective and Efficient Microwave-Assisted Deprotection of Silyl Ethers with Selectfluor'. Journal of Organic Chemistry . | |
| Fekner, T.,Muller-Bunz, H.,Guiry, P. J. (2008) 'Synthesis, Resolution, and Application of Cyclobutyl- and Adamantyl-Quinazolinap Ligands'. European Journal of Organic Chemistry, (30):5055-5066. |
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| Guiry PJ, Maxwell AC, Franc C, Pouchain L, Muller-Bunz H. (2008) 'Electronically varied quinazolinaps for asymmetric catalysis'. Org Biomol Chem, 20 (NA):3848-3853. | |
| Professor Gil Lee | |
| Ajit K. Mahapatro, D. Janes, K. Jeong, and G. Lee (2009) 'Stable and reporducible electronic conduction through DNA molecular junctions'. Applied Physics Letters, 95 (083106). | |
| Professor Robert O'Neill | |
| Bazzu,G.; Puggioni,G.M.; Dedola,S.; Calia,G.; Rocchitta,G.; Migheli,R.; Desole,M.S.; Lowry,J.P.; O'Neill,R.D.; Serra,P.A. (2009) 'Real-time monitoring of brain tissue oxygen using a miniaturized biotelemetric device implanted in freely-moving rats'. Analytical Chemistry, 81 (6):2235-2241. | |
| Rothwell,S.A.; Kinsella,M.E.; Zain,Z.M.; Serra,P.A.; Rocchitta,G.; Lowry,J.P.; O'Neill,R.D. (2009) 'Contributions by a novel edge effect to the permselectivity of an electrosynthesized polymer for microbiosensor applications'. Analytical Chemistry, 81 (10):3911-3918. | |
| Calia,G.; Rocchitta,G.; Migheli,R.; Puggioni,G.M.; Spissu,Y.; Bazzu,G.; Mazzarello,V.; Lowry,J.P.; O'Neill,R.D.; Desole,M.S.; Serra,P.A. (2009) 'Biotelemetric monitoring of brain neurochemistry in conscious rats, using microsensors and biosensors'. Sensors, 9 (4):2511-2523. | |
| AL Mulla,I.; Lowry,J.P.; Serra,P.A.; O'Neill,R.D. (2009) 'Development of a voltammetric technique for monitoring brain dopamine metabolism: compensation for interference caused by DOPAC electrogenerated during homovanillic acid detection'. Analyst, 134 (5):893-898. | |
| Killoran SJ, O'Neill RD (2008) 'Characterization of permselective coatings electrosynthesized on Pt-Ir from the three phenylenediamine isomers for biosensor applications'. Electrochimica Acta, 53 (24):7303-7312. | |
| Migheli,R.; Puggioni,G.M.; Dedola,S.; Rocchitta,G.; Calia,G.; Bazzu,G.; Esposito,G.; Lowry,J.P.; O'Neill,R.D.; Desole,M.S.; Miele,E.; Serra,P.A. (2008) 'Novel integrated microdialysis-amperometric system for in vitro detection of dopamine secreted from PC12 cells: Design, construction, and validation'. Analytical Biochemistry, 380 (2):323-330. | |
| Professor Stefan Oscarson | |
| Oscarson S, Bonaccorsi F, Catelani G, (2009) 'A new route for the synthesis of Streptococcus pneumoniae 19F and 19A capsular polysaccharide fragments avoiding the beta-mannosamine glycosylation step'. Carbohydrate research, 344 (12):1442-1448. | |
| J. D. M. Olsson, S. Oscarson (2009) 'Synthesis of phosphorylated Neisseria meningitidis inner core lipopolysaccharide structures'. TETRAHEDRON-ASYMMETR, 20 :879-886. | |
| Andersson, Claes-Henrik; Lahmann, Martina; Oscarson, Stefan; Grennberg, Helena (2009) 'Reversible non-covalent derivatisation of carbon nanotubes with glycosides'. Soft Matter, 5 (14):2713-2716. | |
| Casadevall A, Nakouzi A, Zhang T, Oscarson S, (2009) 'The common Cryptococcus neoformans glucuronoxylomannan M2 motif elicits non-protective antibodies'. Vaccine, 27 (27):3513-3518. | |
| Widmalm G, Olsson JD, Landström J, Rönnols J, Oscarson S, (2009) 'Synthesis of and molecular dynamics simulations on a tetrasaccharide corresponding to the repeating unit of the capsular polysaccharide from Salmonella enteritidis'. Organic &Amp; Biomolecular Chemistry, 7 (8):1612-1618. | |
| Surolia A, Gupta G, Gemma E, Oscarson S, (2008) 'Defining substrate interactions with calreticulin: an isothermal titration calorimetric study'. Glycoconjugate journal, 25 (8):797-802. | |
| Snippe H, Safari D, Dekker HA, Joosten JA, Michalik D, de Souza AC, Adamo R, Lahmann M, Sundgren A, Oscarson S, Kamerling JP, (2008) 'Identification of the smallest structure capable of evoking opsonophagocytic antibodies against Streptococcus pneumoniae type 14'. Infection and Immunity, 76 (10):4615-4623. | |
| Mowbray SL, Covarrubias AS, Högbom M, Bergfors T, Carroll P, Mannerstedt K, Oscarson S, Parish T, Jones TA, (2008) 'Structural, biochemical, and in vivo investigations of the threonine synthase from Mycobacterium tuberculosis'. Journal of Molecular Biology, 381 (3):622-633. | |
| Oscarson S, Olsson JD, Eriksson L, Lahmann M, (2008) 'Investigations of glycosylation reactions with 2-N-acetyl-2N,3O-oxazolidinone-protected glucosamine donors'. Journal of Organic Chemistry, 73 (18):7181-7188. | |
| Dr Francesca Paradisi | |
| O'Reilly E, Lestini E, Baiducci D, et al. (2009) 'One-step diketopiperazine synthesis using phase transfer catalysis'. Tetrahedron Letters, 50 (15):1748-1750. | |
| Conway PA, Devine K, Paradisi F (2009) 'A simple and efficient method for the synthesis of Erlenmeyer azlactones'. Tetrahedron, 65 (15):2935-2938. | |
| Paradisi, F. et al. (2008) 'Engineered dehydrogenase biocatalysts for non-natural amino acids: efficient isolation of the D-enantiomer from racemic mixtures'. Organic and Biomolecular Chemistry . | |
| Gleeson, B. et al. (2008) '\i Novel organotin antibacterial and anticancer drugs0'. Polyhedron, 27 :3619-3624. | |
| Dr Andrew Phillips | |
| Renfrew, A. K.,Phillips, A. D.,Egger, A. E.,Hartinger, C. G.,Bosquain, S. S.,Nazarov, A. A.,Keppler, B. K.,Gonsalvi, L.,Peruzzini, M.,Dyson, P. J. (2009) 'Influence of Structural Variation on the Anticancer Activity of RAPTA-Type Complexes: ptn versus pta'. Organometallics, 28 (4):1165-1172. |
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| Renfrew, Anna K.; Phillips, Andrew D.; Tapavicza, Enrico; Scopelliti, Rosario; Rothlisberger, Ursula; Dyson, Paul J. (2009) 'Tuning the Efficacy of Ruthenium(II)-Arene (RAPTA) Antitumor Compounds with Fluorinated Arene Ligands'. Organometallics, 28 (17):5061-5071. |
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| Phillips, Andrew D.; Fei, Zhaofu; Ang, Wee Han; Scopelliti, Rosario; Dyson, Paul J. (2009) 'A Crystallographic Story of Snakes and Ladders: Encapsulated Water Polymers and Rigid Metal Complexes Based on Mono-N-substituted Carboxylate 4,4'-Bipyridine'. Journal of Crystal Growth, 9 (4):1966-1978. |
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| Zhu, Zhongliang; Wright, Robert J.; Brown, Zachary D.; Fox, Alexander R.; Phillips, Andrew D.; Richards, Anne F.; Olmstead, Marilyn M.; Power, Philip P. (2009) 'Chalcogenide/Chalcogenolate Structural Isomers of Organo Group 13 Element Derivatives: Reactions of the Dimetallenes Ar'MMAr' (Ar' = C6H3-2,6-(C6H3-2,6-Pri2)2; M = Ga or In) with N2O or S8 To Give (Ar'MIIIE)2 (E = O or S) and the Synthesis and Characterization of [Ar'EMI]2 (M = In or Tl; E = O, S)'. Organometallics, 28 (8):2512-2519. |
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| Dr James Anthony Sullivan | |
| Sullivan, JA; Flanagan, KA; Hain, H (2008) 'Selective H-D exchange catalysed by aqueous phase and immobilised Pd nanoparticles'. Catalysis Today, 139 (3):154-160. | |
| Dr Matthias Tacke | |
| B. Gleeson, J. Claffey, A. Deally, M. Hogan, L. M. Menéndez Méndez, H. Müller-Bunz, S. Patil, D. Wallis, M. Tacke (2009) 'Synthesis and Cytotoxicity Studies of Fluorinated Derivatives of Vanadocene Y'. European Journal of Inorganic Chemistry, :2804-2810. | |
| M. Hogan, M. Tacke (2009) 'Bioorganometallic Chemistry: A Key To New Chemotherapy?'. Insights into Coordination, Bioinorganic and Applied Inorganic Chemistry, :403-412. | |
| B. Gleeson, J. Claffey, M. Hogan, H. Müller-Bunz, D. Wallis, M. Tacke (2009) 'Novel Benzyl-Substituted Vanadocene Anticancer Drugs'. Journal of Organometallic Chemistry, 694 :1369-1374. | |
| D. Wallis, J. Claffey, B. Gleeson, M. Hogan, H. Müller-Bunz, M. Tacke (2009) 'Novel Zirconocene Anticancer Drugs?'. Journal of Organometallic Chemistry, 694 :828-833. | |
| A. Vessières, M.-A. Plamont, C. Cabestaing, J. Claffey, S. Dieckmann, M. Hogan, H. Müller-Bunz, K. Strohfeldt, M. Tacke (2009) 'Proliferative and Antiproliferative Effects of Titanium- and Iron-Based Metallocene Anticancer Drugs'. Journal of Organometallic Chemistry, 694 :874-879. | |
| I. Fichtner, J. Claffey, B. Gleeson, M. Hogan, D. Wallis, H. Weber, M. Tacke (2008) '\i Antitumor Activity of Oxali-Titanocene Y in Xenografted Caki-1 Tumors in Mice0'. Letters in Drug Design & Discovery, 5 :489-493. | |
| B. Gleeson, J. Claffey, D. Ertler, M. Hogan, H. Müller-Bunz, F. Paradisi, D. Wallis, M. Tacke (2008) 'Novel Organotin Antibacterial and Anticancer'. Polyhedron, 27 :3619-3624. | |
| M. Tacke (2008) 'The Interaction of Titanocene Y with Double-Stranded DNA: A Computational Study'. Letters in Drug Design & Discovery, 5 :332-335. | |
| M. Hogan, J. Cotter, J. Claffey, B. Gleeson, D. Wallis, D. O¿Shea, M. Tacke (2008) '\i Synthesis and Cytotoxicity Studies of New Dimethylamino-Functionalised and Azaindole-Substituted Titanocene Anticancer Agents0'. Helvetica Chimica Acta, 91 :1787-1797. | |
| Dr Xiangming Zhu | |
| Xiangming Zhu, Richard R. Schmidt (2009) 'New Principles for Glycoside Bond Formation'. Angewandte Chemie International Edition, 48 :1900-1934. | |
| Ravindra T. Dere, Xiangming Zhu (2008) 'The First Synthesis of a Thioglycoside Analogue of the Immunostimulant KRN7000'. Organic Letters, 10 (20):4641-4644. | |
| Cristina Lucas-Lopez, Niamh Murphy, Xiangming Zhu (2008) 'Catalytic Glycosylation with Glycosyl Thioimidate Donors'. European Journal of Organic Chemistry, 2008 (26):4401-4404. | |
| Dr James Anthony Sullivan | |
| Sullivan, Sherry, Dulgheru and Burnham (2008) A systematic examination of the effect of preparation variables on the properties and SCR-NH3 activity of Fe ZSM-5 catalysts 5th International Conference on Environmental Catalysis, | |
| Sullivan, Shanahan, McNamara and Byrne (2008) Preparation, characterisation and activity testing of gold catalysts supported on single walled carbon nanotubes 5th International Conference on Environmental Catalysis, | |
| Sullivan and Dulgheru (2008) The effect of NOx traps on the combustion of particulate matter 5th International Conference on Environmental Catalysis, | |
