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UCD School of Chemical & Bioprocess Engineering

'Sugar colonies'. Image by Ms. Yvonne Abbott.

'Sugar colonies'. Image by Ms. Yvonne Abbott.

UCD School of Chemical & Bioprocess Engineering - Research Publications 2009/10

Below is the list of research publications for the UCD School of Chemical & Bioprocess Engineering in the academic year 2009/10




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Book Chapters
Professor Mohamed Al-Rubeai
Naciri M., Holmes P., Al-Rubeai M. (2010) 'Cell Cycle Synchronization' In: Encyclopedia of Industrial Biotechnology. USA: John Wiley & Sons, Ltd.  
Khoo S. H. G., Singh R. P., Al-Rubeai M. (2010) 'Apoptosis' In: Encyclopedia of Industrial Biotechnology. USA: John Wiley & Sons, Ltd.  
Naciri M. and Al-Rubeai M. (2010) 'Cell Cycle' In: Encyclopedia of Industrial Biotechnology. USA: John Wiley & Sons, Ltd.  
Al-Rubeai M. (2009) 'Cell Engineering ¿ Overview' In: Al-Rubeai M (eds). Cell Engineering. Dordrecht: Springer.  
Dr Maria Raytchinova Kosseva
MR Kosseva (2009) 'Processing of Food Wastes' In: Steve Taylor (eds). Advances in Food and Nutrition Research. USA: Burlington: Academic Press.  
MR Kosseva and J Irwin (2009) 'Enzymes in milk and cheese industries' In: P.S.Panesar, S.S.Marwaha & H. Kumar (eds). Enzymes in Food Processing: Fundamentals and Potential Applications. New Delhi: I.K. International Publishing House Pvt. Ltd.  
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Books Edited
Dr Cosima Stubenrauch
C. Stubenrauch, R. Miller (Ed.). (2010) Self-Organisation under Confinement - SOCON. Amsterdam: Elsevier.  
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Peer Reviewed Journals
Professor Mohamed Al-Rubeai
Kuystermans D., Dunn M. J. and Al-Rubeai M. (2010) 'A proteomic study of cMyc improvement of CHO culture'. BMC Biotechnology, 10 . Available Online  
Ardhaoui, M,Naciri, M,Mullen, T,Brugha, C,Keenan, AK,Al-Rubeai, M,Dowling, DP (2010) 'Cell Behaviour on Atmospheric Plasma Deposited Siloxane and Fluorosiloxane Coatings'. Science, 24 :889-903.  
Krampe B and Al-Rubeai M. (2010) 'Cell death in mammalian cell culture: molecular mechanisms and cell line engineering strategies'. Cytotechnology, 62 (3):175-188.  
Boehm D., Murphy W. G. and Al-Rubeai M. (2010) 'The effect of mild agitation on in vitro erythroid development'. Journal of Immunological Methods, 360 :20-29.  
Melero-Martin, JM,Santhalingam, S,Al-Rubeai, M (2009) 'Methodology for Optimal In Vitro Cell Expansion in Tissue Engineering'. Stem, 112 :209-229.  
Boehm, D,Murphy, WG,Al-Rubeai, M (2009) 'The potential of human peripheral blood derived CD34+cells for ex vivo red blood cell production'. Journal of Biotechnology, 144 :127-134.  
Dr Eoin Casey
Cotter JJ, O'Gara JP, Stewart PS, Pitts B, Casey E. (2010) 'Characterization of a modified rotating disk reactor for the cultivation of Staphylococcus epidermidis biofilm'. Journal of Applied Microbiology, 109 (6):2105-2117. Available Online  
Dr Niall J English
R. Long and N.J. English (2010) 'First-principles calculation of electronic structure of V-doped anatase TiO2'. Chemphyschem : a European journal of chemical physics and physical chemistry, 11 (12):2606-2611.  
R. Long and N.J. English (2010) 'Electronic structure and origin of visible-light activity of C-doped cubic In2O3 from first-principles calculations'. Journal of Physical Chemistry C, 114 (32):13942-13946.  
R. Long and N.J. English (2010) 'First-principles calculation of synergistic (N, P) codoping effects on the visible-light photocatalytic activity of anatase TiO2'. Journal of Physical Chemistry C, 114 (27):11984-11990.  
R. Long and N.J. English (2010) 'Density Functional Theory Studies of Doping in Titania'. Molecular Simulation, 36 (7&8):618-632.  
N.J. English and J.S. Tse (2010) 'Guest and host contributions towards thermal conduction in various polymorphs of methane hydrate'. computational materials science, 49 :S176-S180.  
R. Long and N.J. English (2010) 'Synergistic effects on band gap-narrowing in titania by codoping from first-principles calculations'. Chemistry of Materials, 22 (5):1616-1623.  
R. Long, N.J. English and D.A. Mooney (2010) 'Electronic structures of N- and C-doped NiO from first-principles calculations'. Physics Letters A, 374 :1184-1187.  
N.J. English, J.S. Tse and D.J. Carey (2009) 'Mechanisms for Thermal Conduction in Various Polymorphs of Methane Hydrate'. Physical Review B, 80 (13).  
R. Long and N.J. English (2009) 'Density functional theory description of the mechanism of ferromagnetism in nitrogen-doped SnO2'. Physics Letters A, 374 :319-322.  
R. Long and N.J. English (2009) 'Magnetic properties of first-row element-doped ZnS semiconductors: a density functional theory investigation'. Physical Review B, 80 (11).  
N.J. English and D.A. Mooney (2009) 'Electromagnetic field effects on binary dimethylimidazolium-based ionic liquid/water solutions'. Physical Chemistry Chemical Physics, 11 (41):9370-9374.  
R. Long, N.J. English and Y. Dai (2009) 'First-Principles Study of S Doping at the Rutile TiO2 (110) Surface'. Journal of Physical Chemistry, 113 (40):17464-17470.  
N.J. English and W.F. Long (2009) 'Estimation of zeta potentials of titania nanoparticles by molecular simulation'. Physica A, 388 (19):4091-4096.  
J.-A. Garate, N.J. English and J.M.D. MacElroy (2009) 'Static and alternating electric field and distance-dependent effects on carbon nanotube-assisted water self-diffusion across lipid membranes'. Journal of Chemical Physics, 131 (11).  
Professor Brian Glennon
Hao, H., Su, W., Barrett, M., Caron, V., Healy, A.M., Glennon, B. (2010) 'A Calibration-Free Application of Raman Spectroscopy to the Monitoring of Mannitol Crystallization and its Polymorphic Transformation'. Organic Process Research and Development, 14 :1209-1214. Available Online  
Barrett, M., McNamara, M., Hao, H., Barrett, P. & Glennon, B. (2010) 'Supersaturation Tracking for the Development, Optimization and Control of Crystallization Processes'. Chemical Engineering Research & Design, 88 :1108-1119. Available Online  
Dr Patricia Mary Kieran
Kieran PM & O'Neill G (2009) 'Peer-Assisted Tutoring in a Chemical Engineering Curriculum: Tutee and Tutor Experiences'. Australasian Journal of Peer Learning, 2 (1). Available Online  
Professor Donal MacElroy
Awais, M,Rahman, M,MacElroy, JMD,Coburn, N,Dini, D,Vos, JG,Dowling, DP (2010) 'Deposition and characterization of NiOx coatings by magnetron sputtering for application in dye-sensitized solar cells'. SURF COAT TECH, 204 :2729-2736.  
Garate, JA,English, NJ,MacElroy, JMD (2009) 'Static and alternating electric field and distance-dependent effects on carbon nanotube-assisted water self-diffusion across lipid membranes'. Chemical Physics, 131 .  
Garate, J.-A., English, N.J., MacElroy, J.M.D. (2009) 'Static and alternating electric field and distance-dependent effects on carbon nanotube-assisted water self-diffusion across lipid membranes'. Journal of Chemical Physics, 131 (11).  
Garate, JA,English, NJ,MacElroy, JMD (2009) 'Carbon nanotube assisted water self-diffusion across lipid membranes in the absence and presence of electric fields'. Molecular Simulation, 35 :3-12.  
Deshmukh, S,Mooney, DA,McDermott, T,Kulkarni, S,MacElroy, JMD (2009) 'Molecular modeling of thermo-responsive hydrogels: observation of lower critical solution temperature'. Soft Matter, 5 :1514-1521.  
Dr Frank MacLoughlin
O'Rourke, AM,MacLoughlin, PF (2010) 'A study of drop breakage in lean dispersions using the inverse-problem method'. Chemical Engineering Science, 65 :3681-3694.  
Dr Susan McDonnell
Lau, TYK,Power, KA,Dijon, S,de Gardelle, I,McDonnell, S,Duffy, MJ,Pennington, SR,Gallagher, WM (2010) 'Prioritization of candidate protein biomarkers from an in vitro model system of breast tumor progression toward clinical verification'. Journal of Proteome Research, 5 :1450-1459. Available Online  
Dr Damian Mooney
Run Long, Niall J. English, Damian A. Mooney (2010) 'Electronic structures of N- and C-doped NiO from first-principles calculations'. PHYSICS LETTERS A, 374 (9):1184-1187.  
English, N.J. and Mooney, D.A. (2009) 'Electromagnetic field effects on binary dimethylimidazolium-based ionic liquid/water solutions'. Physical Chemistry Chemical Physics, 11 (41):9370-9374.  
English, NJ,Mooney, DA (2009) 'Electromagnetic field effects on binary dimethylimidazolium-based ionic liquid/water solutions'. Physical Chemistry Chemical Physics, 11 :9370-9374.  
Dr Mahfujur Rahman
Awais, M,Rahman, M,MacElroy, JMD,Coburn, N,Dini, D,Vos, JG,Dowling, DP (2010) 'Deposition and characterization of NiOx coatings by magnetron sputtering for application in dye-sensitized solar cells'. SURF COAT TECH, 204 :2729-2736.  
Abubakar, T., Rahman, M., Dowling, D. P., Stokes, J. and Hashmi, M.S. J. (2010) 'Mechanical performance of the annealed NiTi shape memory alloy coating onto 316L stainless bio-steel'. Defect and diffusion forum, 297-301 :365-369.  
Dr Ian Reid
Reid, I,Zhang, YF,Demasi, A,Blueser, A,Piper, L,Downes, JE,Matsuura, A,Hughes, G,Smith, KE (2009) 'Electronic structure of the organic semiconductor copper tetraphenylporphyrin (CuTPP)'. Applied Surface Science, 256 :720-725.  
Dr Cosima Stubenrauch
E. Carey, C. Stubenrauch (2010) 'Foaming Properties of mixtures of a Non-Ionic (C12DMPO) and an Ionic Surfactant (C12TAB)'. Journal of Colloid and Interface Science, 346 (414).  
R. von Klitzing, E. Thormann, T. Nylander, D. Langevin, C. Stubenrauch (2010) 'Confinement of Linear Polymers, Surfactants, and Particles between Interfaces'. Advances in Colloid and Interface Science, 155 (19).  
P.M. Claesson, R. Makuska, I. Varga, R. Meszaros, S. Titmuss, P. Linse, J. S. Pedersen, C. Stubenrauch (2010) 'Bottle-Brush Polymers: Adsorption at Surfaces and Interactions with Surfactants'. Advances in Colloid and Interface Science, 155 (50).  
G. Andersson, E. Carey, C. Stubenrauch (2010) 'A Disjoining Pressure Study of Formamide Foam Films Stabilized by Surfactants'. Langmuir, 26 (7752).  
C. Stubenrauch, P.M. Claesson, M. Rutland, E. Manev, I. Johansson, J.S. Pedersen, D. Langevin, D. Blunk, C.D. Bain (2010) 'Mixtures of n-Dodecyl-b-D-maltoside and Hexaoxyethylene Dodecyl Ether: Surface Properties, Bulk Properties, Foam Films, and Foams'. Advances in Colloid and Interface Science, 155 (5).  
E. Carey, C. Stubenrauch (2010) 'A Disjoining Pressure Study of Foam Films Stabilized by Mixtures of a Nonionic (C12DMPO) and an Ionic Surfactant (C12TAB)'. Journal of Colloid Science and Interface Science, 343 (314).  
M. Magno, D.G. Angelescu, C. Stubenrauch (2009) 'Phase diagrams of non-ionic microemulsions containing reducing agents and metal salts as bases for the synthesis of bimetallic nanoparticles'. Colloids and Surfaces A, 348 (116).  
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Conference Publications
Professor Mohamed Al-Rubeai
Tan F., Naciri M., Dowling D., Al-Rubeai M (2010) The Effect of Impaction on the Osteoconductivity of Hydroxyapatite Coating Deposited by a Novel Process. 2nd International Conference on Cellular and Molecular Bioengineering 2nd International Conference on Cellular and Molecular Bioengineering, Singapore,  
Tan F., Naciri M., Dowling D., Al-Rubeai M (2010) Cellular and Molecular Analysis of Human Mesenchymal Stem Cell Attachment, Proliferation and Osteogenic Differentiation Supported by Plasma-activated Hydroxyapatite Coating 2nd International Conference on Cellular and Molecular Bioengineering,  
Al-Rubeai M. (2009) Expansion of stem cells for the production of red blood cells- The role of disposable bioreactors Disposable Biomanufacturing 2009: What is achievable now?, London,  
Dr Niall J English
N.J. English and J.S. Tse (2010) Mechanisms of Thermal Conduction in Various Polymorphs of Methane Hydrates ACAM-CECAM Workshop on Molecular Simulation of Clathrate Hydrates, UCD, Dublin,  
R. Kavethekar, N.J. English, J.M.D. MacElroy (2010) Classical Molecular Simulation of the Titania-Water Interface International Bunsen Discussion Meeting on Light Harvesting and Solar Energy Conversion, Stuttgart,  
S.A. Agarwal, N.J. English, K.R. Thampi, J.M.D. MacElroy, D.A. Mooney (2010) ¿ Titanocene and organic dye adsorption studies on the TiO2 surface using ab-initio and molecular dynamics approaches International Bunsen Discussion Meeting on Light Harvesting and Solar Energy Conversion, Stuttgart,  
R. Long and N.J. English (2010) ¿ Synergistic effects of metal-nonmetal codoping on visible light activated photocatalyst of anatase titania: an ab initio calculation International Conference on Powering a Greener Future: Nanomaterials and Solar Energy Conversion, Cairo,  
N.J. English and J.S. Tse (2009) Mechanisms of Thermal Conduction in Methane Hydrates American Institute of Chemical Engineers Annual Meeting, Nashville,  
R. Long and N.J. English (2009) Density Functional Theory Studies of Doping in Both Bulk- and Surface-State Titania American Institute of Chemical Engineers Annual Meeting, Nashville,  
J.A. Garate, N.J. English and D.A. Mooney (2009) Carbon Nanotube Assisted Water Self-Diffusion Across Lipid Membranes in the Absence and Presence of Electric and Electromagnetic Fields ACAM-CECAM Workshop on HPC and Towards Microscale Simulation, Univ. College Dublin,  
N.J. English (2009) MD Study of Thermal-Driven Methane Hydrate Dissociation ACAM-CECAM Workshop on HPC and Towards Microscale Simulation, Univ. College Dublin,  
R. Long and N.J. English (2009) Magnetic properties of first-row element-doped ZnS semiconductors from first-principles calculations International Conference on Multi-Functional Materials and Structures, Qingdao, China,  
R. Kavethekar, N.J. English, J.M.D. MacElroy and D.A. Mooney (2009) Classical Simulation of the Titania-Water Interface ACAM-CECAM Workshop on HPC and Towards Microscale Simulation, Univ. College Dublin,  
R. Kavethekar, N.J. English, J.M.D. MacElroy and D.A. Mooney (2009) Classical Simulation of the Titania-Water Interface ACAM-CECAM Workshop on Computer Simulation of Metal Oxides, Trinity College Dublin,  
J.A. Garate, N.J. English and J.M.D. MacElroy (2009) Carbon Nanotube Assisted Water Self-Diffusion Across Lipid Membranes in the Absence and Presence of Electric and Electromagnetic Fields CECAM Workshop on Simulation Approaches to Problems in Molecular and Cell Biology, San Sebastian,  
S. Agarwal, N.J. English, J.M.D. MacElroy and D.A. Mooney (2009) Titanocene Adsorption Studies on Rutile (110) Surface using Ab-initio and Molecular Dynamics Approaches ACAM-CECAM Workshop on Computer Simulation of Metal Oxides, Trinity College Dublin,  
R. Long and N.J. English (2009) Density Functional Theory Studies of Doping in Both Bulk- and Surface-State Titania ACAM-CECAM Workshop on Computer Simulation of Metal Oxides, Trinity College Dublin,  
N.J. English and G.Y. Solomentsev (2009) Studies of Hydrogen Bond Lifetimes and Energetics in Proteins Chemical Computing Group European User Group Meeting (invited), Basel,  
N.J. English and J.S. Tse (2009) Resonance Scattering of Phonon Glass-Like Thermal Conductivity in Crystalline Solids Conference of Asian Consortium on Computational Materials Science, Hanoi,  
Dr Patricia Mary Kieran
Kieran P, Malone DM, O'Neill G (2010) Peer-Assisted Tutoring in Chemical Engineering: Development of a Tutor-Oriented Module International Soicety for Engineering Education (ISEE) 2010, Available Online  
Professor Donal MacElroy
Neville, E.M., Mattle, M., Rajesh, B., Thampi, K.R., Sullivan, J.A., MacElroy, J.M.D. (2010) Sol-gel fabrication of carbon-modified titania European Energy Conference, Barcelona, Spain,  
Kavathekar, R., English, N., Mooney, D.A., MacElroy, J.M.D. (2010) Classical Simulation of TiO2 Water Interface Light Harvesting and Solar Energy Conversion, Stuttgart, Germany,  
Agrawal, S., English, N., Mooney, D.A., JMacElroy, J.M.D. (2010) Titanocene and organic dye adsorption studies on TiO2 surface using ab-initio and Molecular Dynamics Approaches Light Harvesting and Solar Energy Conversion, Stuttgart, Germany,  
MacElroy, J.M.D. (2010) Exploring the Potential for Solar Energy Technology in Ireland EU Sustainable Energy Week, ESB, Dublin,  
Rahman, M., Dang, B. H. Q., McDonnell, K., MacElroy, J. M. D. and Dowling, D. P. (2010) On the improvement of the photoactivity of sputtered deposited Ti02 coating by non-metal doping (C, N or C+N) for the application of Hydrogen production by water splitting Proceeding of 5th International Conference on Surfaces, Coatings and Nanostructure Materials (Nano-138), France, 2010,  
Rahman, M., Faure, S., Akter, T., MacElroy, J. M. D. and Dowling, D. P. (2010) Effect of anodizing process condition and post anodizing treatment on the physical and photoresponse properties of the Ti02 nanotubes Proceeding of 5th International Conference on Surfaces, Coatings and Nanostructure Materials (Nano-479), Reims, France, 2010,  
Dembele, A., Rahman, M., MacElroy, J. M. D. and Dowling, D. P. (2010) Microwave plasma sintering of titanium dioxide (Ti02) nanoparticles for the fabrication of dye sensitized solar cell (DSSC) electrodes Proceeding of 5th International Conference on Surfaces, Coatings and Nanostructure Materials (Nano-326), France, 2010,  
Rahman, M. Faure, S., Akter, T., MacElroy, J. M. D. and Dowling, D. P. (2010) Synthesis of visible light active photoelectrode: photocatalytic water splitting on a-Fe203 (Hematite) photoanode Engineering design Innovation Open Forum 2010, Dublin, 29 April,  
Dembele, A., Rahman, M., MacElroy, J.M.D., Dowling, D.P. (2009) Deposition of hybrid organic-inorganic composite coatings using atmospheric plasma jet technique NanoSmat2009: 4th International Conference on Surfaces Coatings and Nanostructured Materials, Rome, Italy,  
Rahman, M., MacElroy, J.M.D., Dowling, D.P. (2009) Development of visible-light active TiO2 nano-thick coatings for the application of Hydrogen production by photoelectrochemical water splitting NanoSmat2009: 4th International Conference on Surfaces Coatings and Nanostructured Materials, Rome, Italy,  
Kavathekar, R., English, N., MacElroy, J.M.D. (2009) Classical Simulation of TiO2 - Water simulations Computer Simulation of Oxides, Trinity College Dublin,  
Agrawal, S., J English, N.J., Mooney, D.A., MacElroy, J.M.D. (2009) Titanocene Adsorption Studies on TiO2 (110) Rutile Surface using Ab-initio and Molecular Dynamics Approaches Computer Simulation of Oxides, Trinity College Dublin,  
Dr Mahfujur Rahman
Rahman, M., Faure, S., Akter, T., MacElroy, J. M. D. and Dowling, D. P. (2010) Effect of anodizing process condition and post anodizing treatment on the physical and photoresponse properties of the Ti02 nanotubes Proceeding of 5th International Conference on Surfaces, Coatings and Nanostructure Materials (Nano-479), Reims, France, 2010,  
Rahman, M., Dang, B. H. Q., McDonnell, K., MacElroy, J. M. D. and Dowling, D. P. (2010) On the improvement of the photoactivity of sputtered deposited Ti02 coating by non-metal doping (C, N or C+N) for the application of Hydrogen production by water splitting Proceeding of 5th International Conference on Surfaces, Coatings and Nanostructure Materials (Nano-138), France, 2010,  
Dembele, A., Rahman, M., MacElroy, J. M. D. and Dowling, D. P. (2010) Microwave plasma sintering of titanium dioxide (Ti02) nanoparticles for the fabrication of dye sensitized solar cell (DSSC) electrodes Proceeding of 5th International Conference on Surfaces, Coatings and Nanostructure Materials (Nano-326), France, 2010,  
Coburn, N., Dini, D., Vos, J. G., Awais, M., Rahman, M., Dowling, D. P. and MacElroy, J. M. D. (2010) Use of mono- and Binuclear ruthenium complexes as dye-sensitizeers for CO2 photoreduction 4th ERA Flash Chemistry Conference, 2008, Madrid, Spain,  
Dembele, A., Rahman, M., MacElroy, J.M.D., Dowling, D.P. (2009) Deposition of hybrid organic-inorganic composite coatings using atmospheric plasma jet technique NanoSmat2009: 4th International Conference on Surfaces Coatings and Nanostructured Materials, Rome, Italy,  
Rahman, M., MacElroy, J.M.D., Dowling, D.P. (2009) Development of visible-light active TiO2 nano-thick coatings for the application of Hydrogen production by photoelectrochemical water splitting NanoSmat2009: 4th International Conference on Surfaces Coatings and Nanostructured Materials, Rome, Italy,  
Dr K. Ravindranathan Thampi
Laura L. Tobin, Evin Lee, James Ryle, Dominic Zerulla, K. Ravindranathan Thampi, John T. Sheridan (2010) Solar Simulators: LED Design and Characterisation SPIE Optics + Photonics: Solar Energy + technology,  
E. M. Neville, M. Mattle, B. Rajesh, K. R. Thampi, J. A. Sullivan and J.M.D. MacElroy (2010) Sol-gel fabrication of carbon-modified titania European Energy Conference, Barcelona, Spain,  
Neville, E.M., Mattle, M., Rajesh, B., Thampi, K.R., Sullivan, J.A., MacElroy, J.M.D. (2010) Sol-gel fabrication of carbon-modified titania European Energy Conference, Barcelona, Spain,  
J. O'Reilly, K.R. Thampi and D. Zerulla (2010) Investigation of the SILAR Technique for PbS Q-Dots in a Quantum Dot Sensitised Solar Cell and Device Stability with Electrolyte ESFNanotechnology for Sustainable Energy,  
J. O'Reilly, K.R. Thampi and D. Zerulla (2009) Investigation of advanced biomimetic materials for solar energy conversion Inspire BioNano 1st International Conference,  
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Other Publications
Professor Mohamed Al-Rubeai
Tan, F., Stallard, C., Naciri, M. Dowling, D. P. and Al-Rubeai, M. (2010) Cellular and molecular analysis of human mesenchymal stem cell attachment, proliferation and osteogenic differentiation supported by plasma-activated hydroxyapatite coating. Media.  
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