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UCD Conway Institute

'Pop art in science / Andy Warhol effect applied to endothelial cells'. Image by Mr Simone Marcone.

'Pop art in science / Andy Warhol effect applied to endothelial cells'. Image by Mr Simone Marcone.

UCD Conway Institute - Research Publications 2010/11

Below is the list of research publications for the UCD Conway Institute in the academic year 2010/11.




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Book Chapters
Professor William Gallagher
Collins, B. C., Lau, T. Y. K., Pennington, S. R., and Gallagher, W. M. (2011) 'Differential proteomics incorporating iTRAQ labelling and multi-dimensional separations' In: Jean-Charles Gautier (eds). Methods in Molecular Biology - Drug Safety Evaluation. N/A: Humana Press. Available Online  
Cooney, H. C. M. and Gallagher, W. M. (2011) 'Fibulins and their role in the ECM' In: Margareta M. Mueller and Norbert E. Fusenig (eds). Tumour-Associated Fibroblasts and Their Matrix: Tumor Stroma. Unknown: Spinger Science+Business Media B. V.  
Lau, T. Y. K., Collins, B. C., Stone, P., Tang, N., Gallagher, W. M., and Pennington, S. R. (2011) 'Absolute quantification of toxicological biomarkers via multiple reaction monitoring' In: Gautier, J.-C (eds). Methods in Molecular Medicine - Drug Safety Evaluation. New York: Humana Press. Available Online  
Professor Declan Gerard Gilheany
Rachel M. Hiney, Arne Ficks, Helge Müller-Bunz, Declan G. Gilheany and Lee J. Higham (2011) 'Air-stable chiral primary phosphines part (i) synthesis, stability and applications' In: Ian J S Fairlamb, Jason M Lynam (eds). Organometallic Chemistry Volume 37. Cambridge: Royal Society of Chemistry. Available Online  
Professor Catherine Godson
Serhan, CN and Godson, C (2010) 'pp 69-92' In: Lipid Mediators of Regeneration In: Regenerative Nephrology. Elsevier Academic Press: Elsevier Academic Press.  
Professor Wim Meijer
Prescott, J.F., W.G. Meijer, J.A. Vazquez-Boland (2010) 'Rhodococcus' In: C.L. Gyles, J.F. Prescott, J.G. Songer, C.O. Thoen (eds). Pathogenesis of bacterial infections of animals. Ames, IA: Wiley-Blackwell Publishing.  
Dr Matthias Tacke
M. Hogan, M. Tacke (2010) 'Titanocenes - Cytotoxic and Anti-Angiogenic Chemotherapy Against Advanced Renal-Cell Cancer' In: G. Jaouen, N. Metzler-Nolte (eds). Topics in Organometallic Chemistry, Volume 32: Medicinal Organometallic Chemistry. Heidelberg: Springer.  
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Books Edited
Professor Helen Roche
Susan A Lanham-New, Ian A Macdonald, Helen M Roche (Ed.). (2011) Nutrition and Metabolism. United Kingdom: John Wiley & Sons Ltd.  
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Peer Reviewed Journals
Professor Alan Baird
Medani M, Collins D, Docherty NG, Baird AW, O'Connell PR, Winter DC (2011) 'Emerging role of hydrogen sulfide in colonic physiology and pathophysiology'. Inflammatory bowel diseases, 17 (7):1620-1625.  
Walsh EG, Maher S, Devocelle M, O'Brien PJ, Baird AW, Brayden DJ (2011) 'High content analysis to determine cytotoxicity of the antimicrobial peptide, melittin and selected structural analogs'. Peptides, 32 (9):1764-1773. Available Online  
Rogers AC, Hanly AM, Collins D, Baird AW, Winter DC (2011) 'Review Article: Loss of the Calcium-Sensing Receptor in Colonic Epithelium is a Key Event in the Pathogenesis of Colon Cancer'. Cancer .  
Collins, D., Walpole, C., Ryan, E., Winter, D., Baird, A. and Stewart, G. (2011) 'UT-B1 mediates transepithelial urea flux in the rat gastrointestinal tract'. Journal of Membrane Biology, 239 (3):123-130.  
Collins, D,Walpole, C,Ryan, E,Winter, D,Baird, A,Stewart, G (2011) 'UT-B1 Mediates Transepithelial Urea Flux in the Rat Gastrointestinal Tract'. Journal of Membrane Biology, 239 :123-130.  
Walsh, EG,Maher, S,Devocelle, M,O'Brien, PJ,Baird, AW,Brayden, DJ (2011) 'High content analysis to determine cytotoxicity of the antimicrobial peptide, melittin and selected structural analogs'. Peptides, 32 :1764-1773.  
Morrissey NK, Bellenger CR, Ryan MT, Baird AW (2010) 'Cyclooxygenase-2 mRNA expression in equine nonglandular and glandular gastric mucosal biopsy specimens obtained before and after induction of gastric ulceration via intermittent feed deprivation'. Veterinary Research, 71 (11):1312-1320.  
Medani M, Collins D, Docherty NG, Baird AW, O'Connell PR, Winter DC (2010) 'Emerging role of hydrogen sulfide in colonic physiology and pathophysiology'. Inflammatory bowel diseases .  
Dr John Andrew Baugh
Collier, P,Watson, CJ,Voon, V,Phelan, D,Jan, A,Mak, G,Martos, R,Baugh, JA,Ledwidge, MT,McDonald, KM (2011) 'Can emerging biomarkers of myocardial remodelling identify asymptomatic hypertensive patients at risk for diastolic dysfunction and diastolic heart failure?'. European Journal of Heart Failure, 13 :1087-1095.  
Watson, CJ,Ledwidge, MT,Phelan, D,Collier, P,Byrne, JC,Dunn, MJ,McDonald, KM,Baugh, JA (2011) 'Proteomic Analysis of Coronary Sinus Serum Reveals Leucine-Rich alpha 2-Glycoprotein as a Novel Biomarker of Ventricular Dysfunction and Heart Failure'. Heart, 4 :188-126.  
Dr Oliver Blacque
Williams CL, Li C, Kida K, Inglis PN, Mohan S, Semenec L, Bialas NJ, Stupay RM, Chen N, Blacque OE*, Yoder BK*, Leroux MR* *co-corresponding (2011) 'MKS and NPHP modules cooperate to establish basal body/transition zone membrane associations and ciliary gate function during ciliogenesis'. Journal of Cell Biology, 192 (6):1023-1041.  
Kaplan OI, Molla-Herman A, Cevik S, Ghossoub R, Kida K, Kimura Y, Jenkins P, Martens JR, Setou M, Benmerah A, Blacque OE. (2010) 'AP-1 clathrin adaptor facilitates cilium formation and functions with RAB-8 in C. elegans ciliary membrane transport'. Journal of Cell Science, 123 :3966-3977.  
Jensen VL, Bialas NJ, Bishop-Hurley SL, Molday LL, Kida K, Nguyen PA, Blacque OE, Molday RS, Leroux MR, Riddle DL (2010) 'Localization of a guanylyl cyclase to chemosensory cilia requires the novel ciliary MYND domain protein DAF-25'. PLoS Genetics, 6 (11).  
Professor Billy Bourke
Russell RK, Wilson ML, Loganathan S, Bourke B, Kiparissi F, Mahdi G, Torrente F, Rodrigues A, Davies I, Thomas A, Akobeng AK, Fagbemi A, Hyer W, Spray C, Vaish S, Rogers P, McGrogan P, Heuschkel RB, Ayub N, Fell JM, Afzal NA, Green M, Murphy MS, Rao P, Shah N, Ho GT, Naik S, Wilson DC. (2011) 'A British Society of Paediatric Gastroenterology, Hepatology and Nutrition survey of the effectiveness and safety of adalimumab in children with inflammatory bowel disease'. Alimentary Pharmacology & Therapeutics, 33 :946-953.  
Rowland M, Gallagher CG, O'Laoide R, Canny G, Broderick A, Hayes R, Greally P, Slattery D, Daly L, Durie P, Bourke B. (2011) 'Outcome in cystic fibrosis liver disease'. American Journal of Gastroenterology, 106 :104-109.  
Professor David Brayden
Rawlinson LA, O'Gara JP, Jones DS, Brayden DJ (2011) 'Resistance of Staphylococcus aureus to the cationic antimicrobial agent poly(2-(dimethylamino ethyl)methacrylate) (pDMAEMA) is influenced by cell-surface charge and hydrophobicity'. Journal of Medical Microbiology, 60 (Pt 7):968-976. Available Online  
Walsh EG, Maher S, Devocelle M, O'Brien PJ, Baird AW, Brayden DJ (2011) 'High content analysis to determine cytotoxicity of the antimicrobial peptide, melittin and selected structural analogs'. Peptides, 32 (9):1764-1773. Available Online  
Ryan SM, Frías JM, Wang X, Sayers CT, Haddleton DM, Brayden DJ (2011) 'PK/PD modelling of comb-shaped PEGylated salmon calcitonin conjugates of differing molecular weights'. Journal of Controlled Release, 149 (2):126-132. Available Online  
Dr Lorraine Brennan
Osorio, M.T., Moloney, A.P., Brennan, L. and Monahan, F.J. (2011) 'Authentication of beef production systems using a metabolomics based approach'. Animal . Available Online  
Jin Y, Amaral A, McCann A, Brennan L (2011) 'Homocysteine levels impact directly on epigenetic reprogramming in astrocytes'. Neurochemistry international .  
Rubio-Aliaga I, de Roos B, Sailer M, McLoughlin GA, Boekschoten MV, van Erk M, Bachmair EM, Van Schothorst EM, Keijer J, Coort SL, Evelo C, Gibney MJ, Daniel H, Muller M, Kleemann R, Brennan L (2011) 'Alterations in hepatic one-carbon metabolism and related pathways following a high fat dietary intervention'. Genomics .  
O'Sullivan A, Gibney MJ, Brennan L (2011) 'Dietary intake patterns are reflected in metabolomic profiles: potential role in dietary assessment studies'. Clinical Nutrition, 93 (2):314-321.  
O'Sullivan A, Gibney MJ, Connor AO, Mion B, Kaluskar S, Cashman KD, Flynn A, Shanahan F, Brennan L (2011) 'Biochemical and metabolomic phenotyping in the identification of a vitamin D responsive metabotype for markers of the metabolic syndrome'. Molecular nutrition & food research .  
Fan, Y., Murphy, T.B., Byrne, J., Brennan, L., Fitzpatrick, J. and Watson, R.W.G. (2011) 'Applying Random Forests to identify biomarker panels in serum 2D-DIGE data for the detection and staging of prostate cancer'. Journal of Proteome Research, 10 (3):1361-1373.  
O'Sullivan, A,Balducci, D,Paradisi, F,Cashman, KD,Gibney, MJ,Brennan, L (2011) 'Effect of supplementation with vitamin D-3 on glucose production pathways in human subjects'. Molecular nutrition & food research, 55 :1018-1025.  
Nyamundanda, G., Brennan, L and Gormley, I.C. (2010) 'Probabilistic principal component analysis for metabolomic data'. BMC Bioinformatics, 11 (571).  
Professor Geraldine Butler
Sai S, Holland LM, McGee CF, Lynch DB, Butler G (2011) 'Evolution of Mating within the Candida parapsilosis Species Group'. Eukaryotic Cell, 10 (4):578-587.  
Silva AP, Miranda IM, Guida A, Synnott J, Rocha R, Silva R, Amorim A, Pina-Vaz C, Butler G, Rodrigues AG. (2011) 'Transcriptional Profiling of Azole-Resistant Candida parapsilosis Strains'. Antimicrobial Agents and Chemotherapy, 55 :3546-3556.  
Dr Gerard Cagney
Ryan C, Greene D, Guenole A, van Attikum H, Krogan NJ, Cunningham P, Cagney G (2011) 'Improved functional overview of protein complexes using inferred epistatic relationships'. BMC systems biology, 5 (80). Available Online  
Agbor TA, Cheong A, Comerford KM, Scholz CC, Bruning U, Clarke A, Cummins EP, Cagney G, Taylor CT (2010) 'Small ubiquitin-related modifier (SUMO)-1 protein modification promotes glycolysis in Hypoxia'. Journal of Biological Chemistry .  
Zheng J, Benschop JJ, Shales M, Kemmeren P, Greenblatt J, Cagney G, Holstege F, Li H, Krogan NJ (2010) 'Epistatic relationships reveal the functional organization of yeast transcription factors'. Molecular systems biology, 6 .  
Professor Sean Callanan
Jahns H, Callanan JJ, McElroy MC, Sammin DJ, Bassett HF (2011) 'Post-mortem findings in Irish culled hounds'. Journal of comparative pathology, 145 (1):59-67.  
Fletcher NF, Meeker RB, Hudson LC, Callanan JJ (2011) 'The neuropathogenesis of feline immunodeficiency virus infection: barriers to overcome'. Veterinary Journal, 188 (3):260-269.  
O'Connor AE, Mc Gee MM, Likar Y, Ponomarev V, Callanan JJ, O'shea DF, Byrne AT, Gallagher WM (2011) 'Mechanism of cell death mediated by a BF(2) -chelated tetraaryl-azadipyrromethene photodynamic therapeutic: Dissection of the apoptotic pathway in vitro and in vivo'. INT J CANCER .  
Viana D, Selva L, Callanan JJ, Guerrero I, Ferrian S, Corpa JM (2010) 'Strains of Staphylococcus aureus and pathology associated with chronic suppurative mastitis in rabbits'. Veterinary Journal .  
Ellinger-Ziegelbauer H, Adler M, Amberg A, Brandenburg A, Callanan JJ, Connor S, Fountoulakis M, Gmuender H, Gruhler A, Hewitt P, Hodson M, Matheis KA, McCarthy D, Raschke M, Riefke B, Schmitt CS, Sieber M, Sposny A, Suter L, Sweatman B, Mally A (2010) 'The enhanced value of combining conventional and omics analyses in early assessment of drug-induced hepatobiliary injury'. Toxicology and applied pharmacology .  
Dr John Crean
C. O'Donovan, Fionnuala Hickey, Derek P. Brazil, Noelynn Oliver, Finian Martin, Catherine Godson, and John Crean (2011) 'Cross talk between connective tissue growth factor and transforming growth factor-Beta1 via interaction with the type III TGF-Beta receptor modulates mesangial cell behavior with pathogenic implications for diabetic nephropathy'. Biochem J .  
Kavanagh DH, Savage DA, Patterson CC, McKnight AJ, Crean JK (2011) 'Association Analysis of Canonical Wnt Signalling Genes in Diabetic Nephropathy'. PLoS ONE, 6 (8).  
Smith, J. Meehan, M., Crean J. and McCann A (2011) 'Alpha T-catenin (CTNNA3); A gene in the hand is worth two in the nest'. Cellular and Molecular Life Sciences, 68 (15):2493-2498.  
Professor Mark Crowe
Pluta K, Irwin JA, Dolphin C, Richardson L, Fitzpatrick E, Gallagher ME, Reid CJ, Crowe MA, Roche JF, Lonergan P, Carrington SD, Evans AC (2011) 'Glycoproteins and glycosidases of the cervix during the periestrous period in cattle'. Journal of animal science .  
Mazurek, M,Mcgee, M,Crowe, MA,Prendiville, DJ,Boivin, X,Earley, B (2011) 'Consistency and stability of behavioural fear responses of heifers to different fear-eliciting situations involving humans'. Applied Animal Behaviour Science, 131 :21-28.  
Herlihy, MM,Berry, DP,Crowe, MA,Diskin, MG,Butler, ST (2011) 'Evaluation of protocols to synchronize estrus and ovulation in seasonal calving pasture-based dairy production systems'. Journal of dairy science, 94 :4488-4501.  
Mazurek, M,McGee, M,Minchin, W,Crowe, MA,Earley, B (2011) 'Is the avoidance distance test for the assessment of animals' responsiveness to humans influenced by either the dominant or flightiest animal in the group?'. Applied Animal Behaviour Science, 132 :107-113.  
Forde, N,Beltman, ME,Lonergan, P,Diskin, M,Roche, JF,Crowe, MA (2011) 'Oestrous cycles in Bos taurus cattle'. Animal reproduction science, 124 :163-169.  
Pang, WY,Earley, B,Murray, M,Sweeney, T,Gath, V,Crowe, MA (2011) 'Banding or Burdizzo castration and carprofen administration on peripheral leukocyte inflammatory cytokine transcripts'. Research in Veterinary Science, 90 :127-132.  
Swangchan-Uthai, T,Walsh, SW,Alexander, SLH,Cheng, ZR,Crowe, MA,Evans, ACO,Wathes, DC (2011) 'Comparison of mRNA for IGFs and their binding proteins in the oviduct during the peri-oestrous period between dairy heifers and lactating cows'. Reproduction, 142 :457-465.  
Okumu LA, Fair T, Szekeres-Bartho J, O'Doherty AM, Crowe MA, Roche JF, Lonergan P, Forde N. (2011) 'Endometrial expression of progesterone induced blocking factor and galectins-1, -3, -9 and -3 binding protein in the luteal phase and early pregnancy in cattle'. Physiological genomics .  
Forde N, Beltman ME, Duffy GB, Duffy P, Mehta JP, O'Gaora P, Roche JF, Lonergan P, Crowe MA. (2011) 'Changes in the endometrial transcriptome during the bovine estrous cycle: effect of low circulating progesterone and consequences for conceptus elongation'. Biology of Reproduction, 84 (2):266-278.  
Mazurek M, Prendiville DJ, Crowe MA, Veissier I, Earley B (2010) 'An on-farm investigation of beef suckler herds using an animal welfare index (AWI)'. Veterinary Research, 6 .  
Forde N, Beltman ME, Lonergan P, Diskin M, Roche JF, Crowe MA (2010) 'Oestrous cycles in Bos taurus cattle'. Animal Reproduction Science .  
Forde N, Beltman ME, Duffy GB, Duffy P, Mehta JP, O'Gaora P, Roche JF, Lonergan P, Crowe MA (2010) 'Changes in the Endometrial Transcriptome During the Bovine Estrous Cycle: Effect of Low Circulating Progesterone and Consequences for Conceptus Elongation'. Biology of Reproduction .  
Dr Seamas Donnelly
Conroy H, Mawhinney L, Donnelly SC (2010) 'Inflammation and cancer: macrophage migration inhibitory factor (MIF)--the potential missing link'. QJM : monthly journal of the Association of Physicians, 103 (11):831-836.  
Professor Michael Duffy
Duffy MJ, van Rossum LG, van Turenhout ST, Malminiemi O, Sturgeon C, Lamerz R, Nicolini A, Haglund C, Holubec L, Fraser CG, Halloran SP (2011) 'Use of faecal markers in screening for colorectal neoplasia: a European group on tumor markers position paper'. INT J CANCER, 128 (1):3-11.  
Duffy MJ, Evoy D, McDermott EW (2010) 'CA 15-3: uses and limitation as a biomarker for breast cancer'. Clinica chimica acta; international journal of clinical chemistry, 411 (23-24):1869-1874.  
Dr Giuliano Elia
Faulkner S, Elia G, Hillard M, O'Boyle P, Dunn M, Morris D (2011) 'Immunodepletion of albumin and immunoglobulin G from bovine plasma'. Proteomics, 11 (11):2329-2335.  
Di Luca, A. et al. (2011) 'Centrifugal drip ia an accessible source for protein indicators of pork ageing and water-holding capacity'. Meat Science, 88 (2):261-270.  
Bouwmeester H, Lynch I, Marvin HJ, Dawson KA, Berges M, Braguer D, Byrne HJ, Casey A, Chambers G, Clift MJ, Elia G, Fernandes TF, Fjellsbø LB, Hatto P, Juillerat L, Klein C, Kreyling WG, Nickel C, Riediker M, Stone V. (2011) 'Minimal analytical characterization of engineered nanomaterials needed for hazard assessment in biological matrices'. Nanotoxicology, 5 (1):1-11.  
Monopoli M. et al. (2011) 'Physical-chemical aspects of Protein Corona: Relevance to In Vitro and In Vivo Biological Impacts of Nanoparticles'. Journal of the American Chemical Society, 133 (8):2525-2534.  
Professor Johan Ericsson
Bengoechea-Alonso MT, Ericsson J. (2010) 'Tumor suppressor Fbxw7 regulates TGFβ signaling by targeting TGIF1 for degradation'. Oncogene .  
Professor Alexander Evans
Hutchinson I, de Veth MJ, Stanton C, Dewhurst RJ, Lonergan P, Evans AC, Butler ST (2011) 'Effects of lipid-encapsulated conjugated linoleic acid supplementation on milk production, bioenergetic status and indicators of reproductive performance in lactating dairy cows'. Journal of Dairy Research, 78 (3):308-317.  
Pluta K, Irwin JA, Dolphin C, Richardson L, Fitzpatrick E, Gallagher ME, Reid CJ, Crowe MA, Roche JF, Lonergan P, Carrington SD, Evans AC (2011) 'Glycoproteins and glycosidases of the cervix during the periestrous period in cattle'. Journal of animal science .  
Mamo S, Carter F, Lonergan P, Leal CL, Al Naib A, McGettigan P, Mehta JP, Evans AC, Fair T (2011) 'Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation'. Genomics, 12 .  
Mossa F, Jimenez-Krassel F, Folger JK, Ireland JL, Smith GW, Lonergan P, Evans AC, Ireland JJ (2010) 'Evidence that high variation in antral follicle count during follicular waves is linked to alterations in ovarian androgen production in cattle'. Reproduction (Cambridge, England), 140 (5):713-720.  
Evans AC, Mossa F, Fair T, Lonergan P, Butler ST, Zielak-Steciwko AE, Smith GW, Jimenez-Krassel F, Folger JK, Ireland JL, Ireland JJ (2010) 'Causes and consequences of the variation in the number of ovarian follicles in cattle'. Society of Reproduction and Fertility supplement, 67 :421-429.  
Dr Neil Ferguson
Chi, C., Bach, A., Engstrom, A., Stromgaard, K., Lundstrom, P., Ferguson, N. & Jemth, P. (2011) 'Biophysical characterization of the complex between human papillomavirus E6 protein and synapse associated protein 97'. Journal of Biological Chemistry, 286 :3597-3606.  
O'Nuallain, B., Freir, D., Nicoll, A. Risse, E., Ferguson, N., Herrron, C., Collinge, J. & Walsh, D. (2010) 'Abeta dimers rapidly form synaptotoxic protofibrils'. Journal of Neuroscience, 30 :14411-14419.  
Arbely, E., Rutherford, T. J., Neuweiler, H., Sharpe, T. D., Ferguson, N. & Fersht, A. R. (2010) 'Carboxly pKa values and acid denaturation of BBL'. Journal of molecular biology, 403 :313-327.  
Professor Oliver Fitzgerald
Rooney T, Edwards CK 3rd, Gogarty M, Greenan L, Veale DJ, FitzGerald O, Dayer JM, Bresnihan B (2010) 'Synovial tissue rank ligand expression and radiographic progression in rheumatoid arthritis: observations from a proof-of-concept randomized clinical trial of cytokine blockade'. Rheumatology international, 30 (12):1571-1580.  
Professor William Gallagher
Gremel, G., Ryan, D., Rafferty, M., Lanigan, F., Hegarty, S., Lavelle, M., Murphy, I., Unwin, L., Joyce, C., Faller, W., McDermott, E.W., Sheahan, K., Ponten, F.,Gallagher W.M. (2011) 'Functional and prognostic relevance of the homeobox protein MSX2 in malignant melanoma'. British Journal of Cancer, 105 (4):565-574.  
O'Neill A.J., Prencipe M., Dowling C., Fan Y., Mulrane L., Gallagher W.M., O'Connor D., O'Connor R., Devery A., Corcoran C., Rani S., O¿Driscoll L., Fitzpatrick J., R., Watson R.W.G. (2011) 'Characterisation and Manipulation of Docetaxel Resistant Prostate Cancer Cell Lines'. MOL CANCER .  
Magnusson, K., de Wit. M., Brennan, D. J., Johnson, L. B., McGee, S. F., Lundberg, E., Naicker, K., Klinger, R., Kampf, C., Asplund, A., Wester, K., Gry, M., Bjartell, A., Gallagher, W.M., Rexhepaj, E., Kilpinen, S., Kallioniemi, O. P., Belt, E., Goos, J., Meijer, G., Birgisson, H., Glimelius, B., Borrebaeck, C. A., Navani, S., Uhlén, M., O?Connor, D. P., Jirström, K., and Pontén, F. (2011) 'SATB2 in combination with cytokeratin 20 identifies over 95% of all colorectal carcinomas'. American Journal of Surgical Pathology, 35 (7):937-948.  
Lindsay, C. R., Lawn, S., Campbell, A. D., Faller, W. J., Rambow, F., Mort, R. L., Timpson, P., Li, A., Cammareri, P., Ridgway, R. A., Morton, J. P., Doyle, B., Hegarty, S., Rafferty, R., Murphy, I. G., McDermott, E. W., Sheahan, K., Pedone, K., Finn, A. J., Groben, P. A., Thomas, N. E., Hao, H., Carson, C., Norman, J. C., Machesky, L. M., Gallagher, W. M., Jackson, I. J., Van Kempen, L., Beermann, F., Der, C., Larue, L., Welch, H. C., Ozanne, B. W. Sansom, O. J. (2011) 'P-Rex1 is required for efficient melanoblast migration and melanoma metastasis'. Nature Communications .  
Dahlman, A., Rexhepaj, E., Brennan, D. J., Gallagher, W. M., Gaber, A., Lindgren, A., Jirström, K., and Bjartell, A (2011) 'Evaluation of the prognostic significance of MSMB and CRISP3 in prostate cancer using automated image analysis'. Modern Pathology, 24 (5):708-719.  
van der Meel, R., Symons, M. H., Kudernatsch, R., Kok, R. J., Schifflers, R. M., Storm, G., Gallagher, W. M., and Byrne, A. T. (2011) 'The VEGF/Rho GTPase signalling pathway: a promising target for antiangiogenic and anti-invasion therapy'. Drug Discovery Today, 16 (5-6):219-228.  
Fitzgerald, K. T., Holladay, C. A., McCarthy, C., Power, K. A., Pandit, A., and Gallagher, W. M. (2011) 'Standardization of models and methods used to assess nanoparticles in cardiovascular applications'. Small, 7 (6):705-717.  
Dasari, S., Chambers, M. C., Codreanu, S. G., Liebler, D. C., Collins, B. C., Pennington, S. R., Gallagher, W. M. and Tabb, D. L. (2011) 'Sequence tagging reveals unexpected modifications in toxicoproteomics'. Chemical research in toxicology, 24 (2):204-216.  
Devitt, E. J., Power, K. A., Lawless, M. W., Browne, J. A., Gaora, P. O., Gallagher, W. M., and Crowe, J. (2011) 'Early proteomic analysis may allow noninvasive identification of hepatitis C response to treatment with pegylated interferon α-2b and ribavirin'. European Journal of Gastroenterology & Hepatology, 23 (2):177-183.  
Dowling, DP,Miller, IS,Ardhaoui, M,Gallagher, WM (2011) 'Effect of Surface Wettability and Topography on the Adhesion of Osteosarcoma Cells on Plasma-modified Polystyrene'. Biomaterials, 26 :327-347.  
Johnston, O,Cassidy, H,O'Connell, S,O'Riordan, A,Gallagher, W,Maguire, PB,Wynne, K,Cagney, G,Ryan, MP,Conlon, PJ,McMorrow, T (2011) 'Identification of beta 2-microglobulin as a urinary biomarker for chronic allograft nephropathy using proteomic methods'. Proteomics Clinical Applications, 5 :422-431.  
Fitzpatrick, S. F., Tambuwala, M. M., Bruning, U., Schaible, B., Scholz, C. C., Byrne, A., O'Connor, A., Gallagher, W. M., Lenihan, C. R., Garvey, J. F., Howell, K., Fallon, P. G., Cummins, E. P., and Taylor, C. T. (2011) 'An intact canonical NF-kB pathway is required for inflammatory gene expression in pesponse to hypoxia'. Journal of Immunology, 186 (2):1091-1096.  
DeNardo, DG,Brennan, DJ,Rexhepaj, E,Ruffell, B,Shiao, SL,Madden, SF,Gallagher, WM,Wadhwani, N,Keil, SD,Junaid, SA,Rugo, HS,Hwang, ES,Jirstrom, K,West, BL,Coussens, LM (2011) 'Leukocyte Complexity Predicts Breast Cancer Survival and Functionally Regulates Response to Chemotherapy'. Cancer, 1 :54-67.  
Brennan, D. J., Laursen, H., O'Connor, D., Borgquist, S., Uhlén, M., Gallagher, W. M., Ponten, F., Millikan, R. C., Ryden, L., and Jirstrom, K. (2011) 'Tumor specific HMG-CoA reductase expression in primary pre-menopausal breast cancer predicts response to tamoxifen'. Breast Cancer Research, 13 (1).  
Agnarsdottir, M, Sooman, L., Bolander, A., Strömberg, S., Rexhepaj, E., Bergqvist, M., Ponten, F., Gallagher, W.M., Lennartsson, J., Ekman, S., Uhlen, M., and Hedstrand, H. (2010) 'SOX10 expression in superficial spreading and nodular malignant melanomas'. Melanoma Research, 20 (6):468-478.  
Rexhepaj, E., Jirstrom, K., O'Connor, D. P., O'Brien, S. L., Landberg G., Duffy, M. J., Brennan, D. J., and Gallagher, W. M. (2010) 'Validation of cytoplasmic-to-nuclear ratio of survivin as an indicator of improved prognosis in breast cancer'. BMC Cancer, 10 .  
Dash, B. C., Rethore, G., Monaghan, M., Fitzgerald, K., Gallagher, W.M, and Pandit, A (2010) 'The influence of size and charge of chitosan/polyglutamic acid hollow spheres on cellular internalization, viability and blood compatibility'. Biomaterials, 31 (32):8188-8197.  
Whyte, J., Thornton, L., McNally, S., McCarthy, S., Lanigan, F., Gallagher, W. M., Stein, T., and Martin, F. (2010) 'PKCdelta regulates cell polarisation and proliferation restriction during mammary acinus formation'. Journal of Cell Science, 123 (19):3316-3328.  
Ursini-Siegel, J., Cory, S., Zuo, D., Hardy, W. R., Rexhepaj, E., Lam, S., Schade, B., Jirstrom, K., Bjur, E., Piccirillo, C. A., DeNardo, D., Coussens, L. M., Brennan, D. J., Gallagher, W. M., Park, M., Pawson, T., Hallett, M. and Muller, W. J. (2010) 'Receptor tyrosine kinase signaling in breast cancer cells inhibits the adaptive immune response to favor a pro-tumorigenic state'. Cancer Research, 70 (20):7776-7787.  
Brennan, D. J., O'Connor, D. P., Rexhepaj, E., Ponten, F., and Gallagher, W. M. (2010) 'Antibody-based proteomics: fast-tracking molecular diagnostics in oncology'. Nature reviews. Cancer, 10 (9):605-617.  
Power, KA, Fitzgerald, KT and Gallagher, WM. (2010) 'Examination of cell-host-biomaterial interactions via high-throughput technologies: A re-appraisal'. Biomaterials, 31 (26):6667-6674.  
Professor Declan Gerard Gilheany
Eoin F. Clarke, Eoin Rafter, Helge Müller-Bunz, Lee J. Higham, Declan G. Gilheany (2011) 'The synthesis of P-stereogenic MOP analogues and their use in rhodium catalysed asymmetric addition'. Journal of Organometallic Chemistry, 696 (23):3608-3615. Available Online  
Milosevic, Sandra; Banide, Emilie V.; Muller-Bunz, Helge; Gilheany, Declan G.; McGlinchey, Michael J. (2011) 'κ1- and κ2-Complexes of Fluorenylidene-Allenyl Phosphines and Phosphine Oxides with Palladium Chloride and Iron Carbonyl: Displacement of Trimethylsilyl by Diphenylphosphino via a Stabilized Carbanion'. Organometallics, 30 (14):3804-3817. Available Online  
Professor Stephen Gordon
Smith, NH et al (2011) 'European 1: a globally important clonal complex of Mycobacterium bovis'. Infection, Genetics and Evolution, 11 (6):1340-1351.  
Vordermeier M, Gordon SV, Hewinson RG (2011) 'Mycobacterium bovis antigens for the differential diagnosis of vaccinated and infected cattle'. Veterinary Microbiology .  
Cadmus SI, Gordon SV, Hewinson RG, Smith NH (2011) 'Exploring the use of molecular epidemiology to track bovine tuberculosis in Nigeria: An overview from 2002 to 2004'. Veterinary Microbiology .  
Professor Andrew Green
Feenstra I, Hanemaaijer N, Sikkema-Raddatz B, Yntema H, Dijkhuizen T, Lugtenberg D, Verheij J, Green A, Hordijk R, Reardon W, Vries BD, Brunner H, Bongers E, Leeuw ND, van Ravenswaaij-Arts C. (2011) 'Balanced into array: genome-wide array analysis in 54 patients with an apparently balanced de novo chromosome rearrangement and a meta-analysis'. European Journal of Human Genetics .  
Anney RJ, Kenny EM, O'Dushlaine C, Yaspan BL, Parkhomenka E; The Autism Genome Project, Buxbaum JD, Sutcliffe J, Gill M, Gallagher L; The AGP Members, Bailey AJ, Fernandez BA, Szatmari P, Scherer SW, Patterson A, Marshall CR, Pinto D, Vincent JB, Fombonne E, Betancur C, Delorme R, Leboyer M, Bourgeron T, Mantoulan C, Roge B, Tauber M, Freitag CM, Poustka F, Duketis E, Klauck SM, Poustka A, Papanikolaou K, Tsiantis J, Gallagher L, Gill M, Anney R, Bolshakova N, Brennan S, Hughes G, McGrath J, Merikangas A, Ennis S, Green A, Casey JP, Conroy JM, Regan R, Shah N, Maestrini E, Bacchelli E, Minopoli F, Stoppioni V, Battaglia A, Igliozzi R, Parrini B, Tancredi R, Oliveira G, Almeida J, Duque F, Vicente A, Correia C, Magalhaes TR, Gillberg C, Nygren G, Jonge MD, Van Engeland H, Vorstman JA, Wittemeyer K, Baird G, Bolton PF, Rutter ML, Green J, Lamb JA, Pickles A, Parr JR, Couteur AL, Berney T, McConachie H, Wallace S, Coutanche M, Foley S, White K, Monaco AP, Holt R, Farrar P, Pagnamenta AT, Mirza GK, Ragoussis J, Sousa I, Sykes N, Wing K, Hallmayer J, Cantor RM, Nelson SF, Geschwind DH, Abrahams BS, Volkmar F, Pericak-Vance MA, Cuccaro ML, Gilbert J, Cook EH, Guter SJ, Jacob S, Nurnberger Jr JI, McDougle CJ, Posey DJ, Lord C, Corsello C, Hus V, Buxbaum JD, Kolevzon A, Soorya L, Parkhomenko E, Leventhal BL, Dawson G, Vieland VJ, Hakonarson H, Glessner JT, Kim C, Wang K, Schellenberg GD, Devlin B, Klei L, Minshew N, Sutcliffe JS, Haines JL, Lund SC, Thomson S, Yaspan BL, Coon H, Miller J, McMahon WM, Munson J, Estes A, Wijsman EM (2011) 'Gene-ontology enrichment analysis in two independent family-based samples highlights biologically plausible processes for autism spectrum disorders'. European Journal of Human Genetics .  
O'Doherty M, Mc Creery K, Green AJ, Tuwir I, Brosnahan D. (2011) 'Incontinentia pigmenti--ophthalmological observation of a series of cases and review of the literature'. British Journal of Ophthalmology, 95 (1):11-16.  
de Leeuw N, Bulk S, Green A, Jaeckle-Santos L, Baker LA, Zinn AR, Kleefstra T, van der Smagt JJ, Vianne Morgante AM, de Vries BB, van Bokhoven H, de Brouwer AP (2010) 'UBE2A deficiency syndrome: Mild to severe intellectual disability accompanied by seizures, absent speech, urogenital, and skin anomalies in male patients'. American Journal of Medical Genetics Part A, 52 (12):3084-3090.  
Anney R, Klei L, Pinto D, Regan R, Conroy J, Magalhaes TR, Correia C, Abrahams BS, Sykes N, Pagnamenta AT, Almeida J, Bacchelli E, Bailey AJ, Baird G, Battaglia A, Berney T, Bolshakova N, Bölte S, Bolton PF, Bourgeron T, Brennan S, Brian J, Carson AR, Casallo G, Casey J, Chu SH, Cochrane L, Corsello C, Crawford EL, Crossett A, Dawson G, de Jonge M, Delorme R, Drmic I, Duketis E, Duque F, Estes A, Farrar P, Fernandez BA, Folstein SE, Fombonne E, Freitag CM, Gilbert J, Gillberg C, Glessner JT, Goldberg J, Green J, Guter SJ, Hakonarson H, Heron EA, Hill M, Holt R, Howe JL, Hughes G, Hus V, Igliozzi R, Kim C, Klauck SM, Kolevzon A, Korvatska O, Kustanovich V, Lajonchere CM, Lamb JA, Laskawiec M, Leboyer M, Le Couteur A, Leventhal BL, Lionel AC, Liu XQ, Lord C, Lotspeich L, Lund SC, Maestrini E, Mahoney W, Mantoulan C, Marshall CR, McConachie H, McDougle CJ, McGrath J, McMahon WM, Melhem NM, Merikangas A, Migita O, Minshew NJ, Mirza GK, Munson J, Nelson SF, Noakes C, Noor A, Nygren G, Oliveira G, Papanikolaou K, Parr JR, Parrini B, Paton T, Pickles A, Piven J, Posey DJ, Poustka A, Poustka F, Prasad A, Ragoussis J, Renshaw K, Rickaby J, Roberts W, Roeder K, Roge B, Rutter ML, Bierut LJ, Rice JP, Salt J, Sansom K, Sato D, Segurado R, Senman L, Shah N, Sheffield VC, Soorya L, Sousa I, Stoppioni V, Strawbridge C, Tancredi R, Tansey K, Thiruvahindrapduram B, Thompson AP, Thomson S, Tryfon A, Tsiantis J, Van Engeland H, Vincent JB, Volkmar F, Wallace S, Wang K, Wang Z, Wassink TH, Wing K, Wittemeyer K, Wood S, Yaspan BL, Zurawiecki D, Zwaigenbaum L, Betancur C, Buxbaum JD, Cantor RM, Cook EH, Coon H, Cuccaro ML, Gallagher L, Geschwind DH, Gill M, Haines JL, Miller J, Monaco AP, Nurnberger JI Jr, Paterson AD, Pericak-Vance MA, Schellenberg GD, Scherer SW, Sutcliffe JS, Szatmari P, Vicente AM, Vieland VJ, Wijsman EM, Devlin B, Ennis S, Hallmayer J (2010) 'A genome-wide scan for common alleles affecting risk for autism'. Human Molecular Genetics, 15 (19-20):4072-4082.  
Noor A, Whibley A, Marshall CR, Gianakopoulos PJ, Piton A, Carson AR, Orlic-Milacic M, Lionel AC, Sato D, Pinto D, Drmic I, Noakes C, Senman L, Zhang X, Mo R, Gauthier J, Crosbie J, Pagnamenta AT, Munson J, Estes AM, Fiebig A, Franke A, Schreiber S, Stewart AF, Roberts R, McPherson R, Guter SJ, Cook EH Jr, Dawson G, Schellenberg GD, Battaglia A, Maestrini E; Autism Genome Project Consortium, Jeng L, Hutchison T, Rajcan-Separovic E, Chudley AE, Lewis SM, Liu X, Holden JJ, Fernandez B, Zwaigenbaum L, Bryson SE, Roberts W, Szatmari P, Gallagher L, Stratton MR, Gecz J, Brady AF, Schwartz CE, Schachar RJ, Monaco AP, Rouleau GA, Hui CC, Lucy Raymond F, Scherer SW, Vincent JB (2010) 'Disruption at the PTCHD1 Locus on Xp22.11 in Autism spectrum disorder and intellectual disability'. science translational medicine, 2 (49).  
Professor Patrick Guiry
Milhau, L,Guiry, PJ (2011) 'Novel Palladium-Free Synthesis of a Key Quinazolinap Precursor'. Synlett, :383-385.  
Borgeson, E,Docherty, NG,Murphy, M,Rodgers, K,Ryan, A,O'Sullivan, TP,Guiry, PJ,Goldschmeding, R,Higgins, DF,Godson, C (2011) 'Lipoxin A(4) and benzo-lipoxin A(4) attenuate experimental renal fibrosis'. FASEB Journal, 25 :2967-2979.  
Wan, M,Godson, C,Guiry, PJ,Agerberth, B,Haeggstrom, JZ (2011) 'Leukotriene B-4/antimicrobial peptide LL-37 proinflammatory circuits are mediated by BLT1 and FPR2/ALX and are counterregulated by lipoxin A(4) and resolvin E1'. FASEB Journal, 25 :1697-1705.  
Aylward, M,Coeffard, V,Guiry, PJ (2011) 'Palladium-Catalyzed Three-Component Transformation of Homoallenols: A Regio- and Stereoselective Route to 1,5-Amino Alcohols'. Journal of Organic Chemistry, 76 :3536-3538.  
W. J. Fleming; H. Müller-Bunz; P. J. Guiry (2010) 'Synthesis and post-resolution modification of new axially chiral ligands for asymmetric catalysis'. European Journal of Organic Chemistry, :5996-6004.  
C. D. Duffy; P. J. Guiry (2010) 'Recent Advances in the Chemistry and Biology of Stable Synthetic Lipoxin Analogues'. MedChemComm, 1 :249-265.  
Dr Jana Haase
Fjorback AW, Müller HK, Haase J, Raarup MK, Wiborg O. (2011) 'Modulation of the dopamine transporter by interaction with Secretory Carrier Membrane Protein 2'. Biochemical and Biophysical Research Communications, 406 (2):165-170.  
Dr Chandralal Hewage
Subasinghage AP, Green BD, Flatt PR, Irwin N, Hewage CM (2010) 'Metabolic and structural properties of human obestatin {1-23} and two fragment peptides'. Peptides, 31 (9):1697-1705.  
Professor Desmond Gerard Higgins
Motherway MO, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O'Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O'Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O'Toole PW, van Sinderen D (2011) 'Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor'. Proceedings of the National Academy of Sciences of the United States of America, 108 (27):11217-11222.  
Cederlund ML, Vendrell V, Morrissey ME, Yin J, Gaora PÓ, Smyth VA, Higgins DG, Kennedy BN. (2011) 'mab21l2 transgenics reveal novel expression patterns of mab21l1 and mab21l2, and conserved promoter regulation without sequence conservation'. Developmental dynamics : an official publication of the American Association of Anatomists, 240 (4):745-754.  
Shi W, Lei F, Zhu C, Sievers F, Higgins DG (2010) 'A complete analysis of HA and NA genes of influenza A viruses'. PLoS ONE, 5 (12).  
Dineen, D., Schröder, M., Higgins, D.G., Cunningham, P., (2010) 'Ensemble approach combining multiple methods improves human transcription start site prediction'. BMC Genomics, 11 . Available Online  
Professor Suzi Jarvis
Kelly, GM,Kilpatrick, JI,van Es, MH,Weafer, PP,Prendergast, PJ,Jarvis, SP (2011) 'Bone cell elasticity and morphology changes during the cell cycle'. Journal of Biomechanics, 44 :1484-1490.  
Sheikh, KH,Giordani, C,Kilpatrick, JI,Jarvis, SP (2011) 'Direct Submolecular Scale Imaging of Mesoscale Molecular Order in Supported Dipalmitoylphosphatidylcholine Bilayers'. Langmuir, 27 :3749-3753.  
Ferber, UM,Kaggwa, G,Jarvis, SP (2011) 'Direct imaging of salt effects on lipid bilayer ordering at sub-molecular resolution'. European Biophysics Journal With Biophysics Letters, 40 :329-338.  
Professor Michael Keane
Kelly E, Mhurchu EN, Sukor S, McDonnell TJ, Tryfonopoulos D, Keane MP (2010) 'Chemotherapy-associated recurrent pneumothoraces in lymphangioleiomyomatosis'. Respiratory care, 55 (11):1491-1494.  
Dr Breandán Kennedy
Cederlund ML, Vendrell V, Morrissey ME, Yin J, Gaora PÓ, Smyth VA, Higgins DG, Kennedy BN. (2011) 'mab21l2 transgenics reveal novel expression patterns of mab21l1 and mab21l2, and conserved promoter regulation without sequence conservation'. Developmental dynamics : an official publication of the American Association of Anatomists, 240 (4):745-754.  
Morrissey ME, Shelton S, Brockerhoff SE, Hurley JB, Kennedy BN (2011) 'PRE-1, a cis element sufficient to enhance cone- and rod- specific expression in differentiating zebrafish photoreceptors'. BMC Developmental Biology, 11 .  
Professor Boris Kholodenko
Aksamitiene, E.Aksamitiene, E.,Kholodenko, B. N.Kholodenko, B. N.,Kolch, W.Kolch, W.,Hoek, J. B.Hoek, J. B.,Kiyatkin, A.Kiyatkin, A. (2010) 'PI3K/Akt-sensitive MEK-independent compensatory circuit of ERK activation in ER-positive PI3K-mutant T47D breast cancer cells'. Cell Signal, 22 (99):1369-781369.  
Aksamitiene E, Kholodenko BN, Kolch W, Hoek JB, Kiyatkin A (2010) 'PI3K/Akt-sensitive MEK-independent compensatory circuit of ERK activation in ER-positive PI3K-mutant T47D breast cancer cells'. Cell, 22 (9):1369-1378.  
Professor Therese Kinsella
Helen M. Reid, Katarina Wikström, David J. Kavanagh, Eamon P. Mulvaney & B. Therese Kinsella. (2011) 'Interaction of Angio-associated Migragatory Cell Protein with the TP-Alpha and TP-Beta isoforms of the human Thromboxane A2 receptor'. Cellular Signalling, 23 (4):700-717.  
Turner, EC, Kavanagh, DJ, Mulvaney, EP, McLean, C, Wikstrom, K, Reid, HM & Kinsella, BT (2011) 'Identification of an interaction between the TPα and TPβ isoforms of the human thromboxane A2 receptor with protein kinase C-related kinase (PRK) 1'. J BIOL CHEM, 287 (17):15440-15457.  
Turner EC, Mulvaney EP, Reid HR& Kinsella BT (2011) 'Interaction of the Human Prostacyclin Receptor with the PDZ adapter protein PDZK1: Role in Endothelial Cell Migration and Angiogenesis'. Molecular Biology of the Cell, 22 (15):2664-2679.  
Peter D. Donnellan, Cisca C. Kimbembe, Helen M. Reid & B. Therese Kinsella. (2011) 'Identification of a Novel Endoplasmic Reticulum Export Motif within the Eighth a-Helical Domain (a-H8) of the human Prostacyclin Receptor'. Biochimica et biophysica acta, 1808 :1202-1218.  
Turner EC, Mulvaney EP, Reid HR& Kinsella BT (2011) 'Interaction of the Human Prostacyclin Receptor with the PDZ adapter protein PDZK1: Role in Endothelial Cell Migration and Angiogenesis'. Molecular Cell Biology, 22 (15):2664-2679.  
Professor Walter Kolch
Kolch W, Pitt A (2010) 'Functional proteomics to dissect tyrosine kinase signalling pathways in cancer'. Nature reviews. Cancer, 10 (9):618-629.  
Aksamitiene, E.Aksamitiene, E.,Kholodenko, B. N.Kholodenko, B. N.,Kolch, W.Kolch, W.,Hoek, J. B.Hoek, J. B.,Kiyatkin, A.Kiyatkin, A. (2010) 'PI3K/Akt-sensitive MEK-independent compensatory circuit of ERK activation in ER-positive PI3K-mutant T47D breast cancer cells'. Cell Signal, 22 (99):1369-781369.  
Shin SY, Rath O, Zebisch A, Choo SM, Kolch W, Cho KH (2010) 'Functional roles of multiple feedback loops in extracellular signal-regulated kinase and Wnt signaling pathways that regulate epithelial-mesenchymal transition'. Cancer Research, 70 (17):6715-6724.  
Aksamitiene E, Kholodenko BN, Kolch W, Hoek JB, Kiyatkin A (2010) 'PI3K/Akt-sensitive MEK-independent compensatory circuit of ERK activation in ER-positive PI3K-mutant T47D breast cancer cells'. Cell, 22 (9):1369-1378.  
Professor Brendan Loftus
Weissenmayer BA, Prendergast JG, Lohan AJ, Loftus BJ (2011) 'Sequencing Illustrates the Transcriptional Response of Legionella pneumophila during Infection and Identifies Seventy Novel Small Non-Coding RNAs'. PLoS ONE . Available Online  
Professor Patrick Lonergan
Clemente M, Lopez-Vidriero I, O'Gaora P, Mehta JP, Forde N, Gutierrez-Adan A, Lonergan P, Rizos D (2011) 'Transcriptome changes at the initiation of elongation in the bovine conceptus'. Biology of reproduction, 85 (2):285-295.  
Hutchinson I, de Veth MJ, Stanton C, Dewhurst RJ, Lonergan P, Evans AC, Butler ST (2011) 'Effects of lipid-encapsulated conjugated linoleic acid supplementation on milk production, bioenergetic status and indicators of reproductive performance in lactating dairy cows'. Journal of Dairy Research, 78 (3):308-317.  
Al Naib A, Hanrahan JP, Lonergan P, Fair S (2011) 'In vitro assessment of sperm from bulls of high and low field fertility'. Theriogenology, 76 (1):161-167.  
Mamo S, Mehta JP, McGettigan P, Fair T, Spencer TE, Bazer FW, Lonergan P (2011) 'RNA Sequencing Reveals Novel Gene Clusters in Bovine Conceptuses Associated with Maternal Recognition of Pregnancy and Implantation'. Biology of reproduction .  
Okumu LA, Fair T, Szekeres-Bartho J, O'Doherty AM, Crowe MA, Roche JF, Lonergan P, Forde N (2011) 'Endometrial expression of progesterone-induced blocking factor and galectins-1, -3, -9, and -3 binding protein in the luteal phase and early pregnancy in cattle'. Genomics, 43 (14):903-910.  
Mamo S, Mehta JP, McGettigan P, Fair T, Spencer TE, Bazer FW, Lonergan P. (2011) 'RNA Sequencing Reveals Novel Gene Clusters in Bovine Conceptuses Associated with Maternal Recognition of Pregnancy and Implantation'. Biology of Reproduction .  
Forde N, Carter F, Spencer TE, Bazer FW, Sandra O, Mansouri-Attia N, Okumu LA, McGettigan PA, Mehta JP, McBride R, O'Gaora P, Roche JF, Lonergan P (2011) 'Conceptus-induced changes in the endometrial transcriptome: how soon does the cow know she is pregnant?'. Biology of reproduction, 85 (1):144-156.  
Pluta K, Irwin JA, Dolphin C, Richardson L, Fitzpatrick E, Gallagher ME, Reid CJ, Crowe MA, Roche JF, Lonergan P, Carrington SD, Evans AC (2011) 'Glycoproteins and glycosidases of the cervix during the periestrous period in cattle'. Journal of animal science .  
Lonergan P (2011) 'Autocrine embryotropins in embryo development: controlling one's own fate'. Biology of reproduction, 84 (6):1075-1076.  
Bermejo-Alvarez P, Rizos D, Lonergan P, Gutierrez-Adan A (2011) 'Transcriptional sexual dimorphism in elongating bovine embryos: implications for XCI and sex determination genes'. Reproduction (Cambridge, England), 141 (6):801-808.  
Aparicio IM, Garcia-Herreros M, O'Shea LC, Hensey C, Lonergan P, Fair T (2011) 'Expression, regulation, and function of progesterone receptors in bovine cumulus oocyte complexes during in vitro maturation'. Biology of reproduction, 84 (5):910-921.  
Bermejo-Alvarez P, Rizos D, Lonergan P, Gutierrez-Adan A (2011) 'Transcriptional sexual dimorphism during preimplantation embryo development and its consequences for developmental competence and adult health and disease'. Reproduction (Cambridge, England), 141 (5):563-570.  
O'Meara CM, Murray JD, Mamo S, Gallagher E, Roche J, Lonergan P (2011) 'Gene silencing in bovine zygotes: siRNA transfection versus microinjection'. Reproduction, fertility, and development, 23 (4):534-543.  
Mamo S, Carter F, Lonergan P, Leal CL, Al Naib A, McGettigan P, Mehta JP, Evans AC, Fair T. (2011) 'Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation'. BMC Genomics, 16 (12).  
Mamo S, Carter F, Lonergan P, Leal CL, Al Naib A, McGettigan P, Mehta JP, Evans AC, Fair T (2011) 'Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation'. Genomics, 12 .  
Arias-Alvarez M, Bermejo-Alvarez P, Gutierrez-Adan A, Rizos D, Lorenzo PL, Lonergan P (2011) 'Effect of leptin supplementation during in vitro oocyte maturation and embryo culture on bovine embryo development and gene expression patterns'. Theriogenology, 75 (5):887-896.  
Clemente, M,Lopez-Vidriero, I,O'Gaora, P,Mehta, JP,Forde, N,Gutierrez-Adan, A,Lonergan, P,Rizos, D (2011) 'Transcriptome Changes at the Initiation of Elongation in the Bovine Conceptus'. Biology of reproduction, 85 :285-295.  
Okumu LA, Fair T, Szekeres-Bartho J, O'Doherty AM, Crowe MA, Roche JF, Lonergan P, Forde N. (2011) 'Endometrial expression of progesterone induced blocking factor and galectins-1, -3, -9 and -3 binding protein in the luteal phase and early pregnancy in cattle'. Physiological genomics .  
Al Naib A, Mamo S, O'Gorman GM, Lonergan P, Swales A, Fair T. (2011) 'Regulation of non-classical major histocompatability complex class I mRNA expression in bovine embryos'. JOURNAL OF REPRODUCTIVE IMMUNOLOGY, 91 (1-2):31-40.  
Mossa F, Jimenez-Krassel F, Folger JK, Ireland JL, Smith GW, Lonergan P, Evans AC, Ireland JJ (2010) 'Evidence that high variation in antral follicle count during follicular waves is linked to alterations in ovarian androgen production in cattle'. Reproduction (Cambridge, England), 140 (5):713-720.  
Carter F, Rings F, Mamo S, Holker M, Kuzmany A, Besenfelder U, Havlicek V, Mehta JP, Tesfaye D, Schellander K, Lonergan P (2010) 'Effect of elevated circulating progesterone concentration on bovine blastocyst development and global transcriptome following endoscopic transfer of in vitro produced embryos to the bovine oviduct'. Biology of reproduction, 83 (5):707-719.  
Forde N, Beltman ME, Lonergan P, Diskin M, Roche JF, Crowe MA (2010) 'Oestrous cycles in Bos taurus cattle'. Animal Reproduction Science .  
Forde N, Beltman ME, Duffy GB, Duffy P, Mehta JP, O'Gaora P, Roche JF, Lonergan P, Crowe MA (2010) 'Changes in the Endometrial Transcriptome During the Bovine Estrous Cycle: Effect of Low Circulating Progesterone and Consequences for Conceptus Elongation'. Biology of Reproduction .  
Evans AC, Mossa F, Fair T, Lonergan P, Butler ST, Zielak-Steciwko AE, Smith GW, Jimenez-Krassel F, Folger JK, Ireland JL, Ireland JJ (2010) 'Causes and consequences of the variation in the number of ovarian follicles in cattle'. Society of Reproduction and Fertility supplement, 67 :421-429.  
Professor David MacHugh
Taraktsoglou, M., Szalabska, U., Magee, D.A., Browne, J.A., Sweeney, T., Gormley, E., MacHugh, D.E. (2011) 'Transcriptional profiling of immune genes in bovine monocyte-derived macrophages exposed to bacterial antigens'. Veterinary Immunology and Immunopathology, 140 :130-139. Available Online  
Waters, S.M., McCabe, M.S., Howard, D.J., Giblin, L., Magee, D.A., MacHugh, D.E., Berry, D.P. (2011) 'Associations between newly discovered polymorphisms in the Bos taurus growth hormone receptor gene and performance traits in Holstein-Friesian dairy cattle'. Animal Genetics, 42 :39-49. Available Online  
Berkowicz, E.W., Magee, D.A., Sikora, K.M., Berry, D.P., Howard, D.J., Mullen, M.P., Evans, R.D., Spillane, C., MacHugh, D.E. (2011) 'Single nucleotide polymorphisms at the imprinted bovine insulin-like growth factor 2 (IGF2) locus are associated with dairy performance in Irish Holstein-Friesian cattle'. Journal of Dairy Research, 78 :1-8. Available Online  
Magee, D.A.,Berry, D.P., Berkowicz, E.W., Sikora, K.M., Howard, D.J., Mullen, M.P., Evans, R.D.,Spillane, C., MacHugh, D.E. (2011) 'Single nucleotide polymorphisms within the bovine DLK1-DIO3 imprinted domain are associated with economically important production traits in cattle'. JOURNAL OF HEREDITY, 102 :94-101. Available Online  
Sikora K.M., Magee D.A., Berkowicz E.W., Berry D.P., Howard D.J., Mullen M.P., Evans R.D., Machugh D.E., Spillane C. (2011) 'DNA sequence polymorphisms within the bovine guanine nucleotide-binding protein Gs subunit alpha (Gsα)-encoding (GNAS) genomic imprinting domain are associated with performance traits'. BMC Genetics, 12 . Available Online  

Hill, E.W., Gu, J., McGivney, B.A., MacHugh, D.E. (2010) 'Targets of selection in the Thoroughbred genome contain exercise-relevant gene SNPs associated with elite racecourse performance'. Animal Genetics, 41 (Suppl 2):56-63. Available Online  
Magee, D.A., Berkowicz, E.W., Sikora, K.M., Sweeney, T., Kenny, D.A., Kelly, A.K., Evans, R.D., Wickham, B.W., Bradley, D.G., Spillane, C., MacHugh, D.E. (2010) 'High concordance of bovine single nucleotide polymorphism genotypes generated using two independent genotyping strategies'. Animal biotechnology, 21 (4):257-262. Available Online  
Magee, D.A., Berry, D.P., Berkowicz, E.W., Sikora, K.M., Howard, D.J., Mullen, M.P., Evans, R.D., Spillane, C., Machugh, D.E. (2010) 'Single nucleotide polymorphisms within the bovine DLK1-DIO3 imprinted domain are associated with economically important production traits in cattle'. J Hered . Available Online  
Professor Jonathan Malthouse
Venneti KC, Malthouse JP, O'Harte FP, Hewage CM (2011) 'Conformational, receptor interaction and alanine scan studies of glucose-dependent insulinotropic polypeptide'. Biochimica et biophysica acta, 1814 (7):882-888.  
Howe, N,Ceruso, M,Spink, E,Malthouse, JPG (2011) 'pH stability of the stromelysin-1 catalytic domain and its mechanism of interaction with a glyoxal inhibitor'. Biochimica Et Biophysica Acta-Proteins and Proteomics, 1814 :1394-1403.  
Venneti, KC,Malthouse, JPG,O'Harte, FPM,Hewage, CM (2011) 'Conformational, receptor interaction and alanine scan studies of glucose-dependent insulinotropic polypeptide'. Biochimica Et Biophysica Acta-Proteins and Proteomics, 1814 :882-888.  
Dr Gethin McBean
McBean, G.J. (2011) 'The transsulfuration pathway: a source of cysteine for glutathione in astrocytes'. Amino Acids .  
Vines, A., McBean, G.J., Blanco-Fernández, A. (2010) 'A flow-cytometric method for continuous measurement of intracellular Ca2+ concentration'. Cytometry Part A, 77 (11):1091-1097.  
Dr Amanda McCann
Doi T, Puri P, McCann A, Bannigan J, Thompson J (2011) 'Epigenetic effect of cadmium on global de novo DNA hypomethylation in the cadmium-induced ventral body wall defect (VBWD) in the chick model'. Toxicological sciences : an official journal of the Society of Toxicology, 120 (2):475-480.  
Jin Y, Amaral A, McCann A, Brennan L (2011) 'Homocysteine levels impact directly on epigenetic reprogramming in astrocytes'. Neurochemistry international .  
Dr Margaret McGee
O'Connor AE, Mc Gee MM, Likar Y, Ponomarev V, Callanan JJ, O'shea DF, Byrne AT, Gallagher WM (2011) 'Mechanism of cell death mediated by a BF(2) -chelated tetraaryl-azadipyrromethene photodynamic therapeutic: Dissection of the apoptotic pathway in vitro and in vivo'. INT J CANCER .  
Professor Paul McLoughlin
Sands M, Howell K, Costello CM, McLoughlin P (2011) 'Placenta growth factor and vascular endothelial growth factor B expression in the hypoxic lung'. Respiratory research, 12 (1).  
Cummins EP, Oliver KM, Lenihan CR, Fitzpatrick SF, Bruning U, Scholz CC, Slattery C, Leonard MO, McLoughlin P, Taylor CT. (2010) 'NF-κB links CO2 sensing to innate immunity and inflammation in mammalian cells'. Journal of Immunology, 185 (7):4439-4445. Available Online  
Dr Tara McMorrow
Johnston O, Cassidy H, O'Connell S, O'Riordan A, Gallagher W, Maguire PB, Wynne K, Cagney G, Ryan MP, Conlon PJ, McMorrow T. (2011) 'Identification of β2-microglobulin as a urinary biomarker for chronic allograft nephropathy using proteomic methods'. Proteomics Clinical Applications, 5 (7-8):422-431.  
O'Connell S, Slattery C, Ryan MP, McMorrow T. (2011) 'Identification of novel indicators of cyclosporine A nephrotoxicity in a CD-1 mouse model'. Toxicology & Applied Pharmacology, 252 (2):201-210.  
J. Lynch, S. Nolan, C. Slattery, R. Feighery, M.P. Ryan, T. McMorrow (2010) 'High-Mobility Group Box Protein 1: A Novel Mediator of Inflammatory-Induced Renal Epithelial-Mesenchymal Transition'. American Journal of Nephrology, 32 (6):590-602.  
H Cassidy, O Johnston, L Brennan, A O Riordan, P Conlon, MP Ryan, T Mc Morrow (2010) 'Metabolomic Analysis of Human(HOMO SAPIENS) Immunosuppressant Nephropathy Post Renal Transplantation'. IRISH J MED SCI, 7 .  
Professor Wim Meijer
Letek, M. et al. (2010) 'The genome of a pathogenic Rhodococcus: cooptive virulence underpinned by key gene acquisitions'. PLoS Genetics, 6 (9).  
Professor Grace V T Mulcahy
Hassan M, Hanrahan JP, Good B, Mulcahy G, Sweeney T (2011) 'A differential interplay between the expression of Th1/Th2/Treg related cytokine genes in Teladorsagia circumcincta infected DRB1*1101 carrier lambs'. Veterinary Research, 42 (1).  
PATTEN, T., GOOD, B., HANRAHAN, J.P., MULCAHY, G., & DE WAAL, T. (2011) 'Gastrointestinal nematode control practices on lowland sheep farms in Ireland with reference to selection for anthelmintic resistance'. Irish Veterinary Journal, 64 :1-4.  
Hassan M, Good B, Hanrahan JP, Campion D, Sayers G, Mulcahy G, Sweeney T (2011) 'The dynamic influence of the DRB1*1101 allele on the resistance of sheep to experimental Teladorsagia circumcincta infection'. Veterinary Research, 42 (1).  
De Waele, V,Berzano, M,Berkvens, D,Speybroeck, N,Lowery, C,Mulcahy, GM,Murphy, TM (2011) 'Age-Stratified Bayesian Analysis To Estimate Sensitivity and Specificity of Four Diagnostic Tests for Detection of Cryptosporidium Oocysts in Neonatal Calves'. Journal of Clinical Microbiology, 49 :76-84.  
Hassan, M,Hanrahan, JP,Good, B,Mulcahy, G,Sweeney, T (2011) 'A differential interplay between the expression of Th1/Th2/Treg related cytokine genes in Teladorsagia circumcincta infected DRB1*1101 carrier lambs'. Veterinary Research, 42 .  
Patten, T,Good, B,Hanrahan, JP,Mulcahy, G,de Waal, T (2011) 'Gastrointestinal nematode control practices on lowland sheep farms in Ireland with reference to selection for anthelmintic resistance'. Irish Veterinary Journal, 64 .  
Hassan, M,Good, B,Hanrahan, JP,Campion, D,Sayers, G,Mulcahy, G,Sweeney, T (2011) 'The dynamic influence of the DRB1*1101 allele on the resistance of sheep to experimental Teladorsagia circumcincta infection'. Veterinary Research, 42 .  
Hacariz, O,Sayers, G,Mulcahy, G (2011) 'A preliminary study to understand the effect of Fasciola hepatica tegument on naive macrophages and humoral responses in an ovine model'. Veterinary Immunology and Immunopathology, 139 :245-249.  
Dr Evelyn Murphy
Ralph JA, Ahmed AU, Santos LL, Clark A, McMorrow J, Murphy EP, Morand EF. (2010) 'Identification of NURR1 as a Mediator of MIF Signalling During Chronic Arthritis: Effects on Glucocorticoid-Induced MKP1'. AMERICAN JOURNAL OF PATHOLOGY, 177 (5):2366-2378.  
Dr Jarlath Nally
Juvet F, Schuller S, O¿Neill EJ, O¿Neill PA, Nally JE. (2011) 'Urinary shedding of Leptospira in a dog with acute leptospirosis despite treatment'. The Veterinary Record .  
Sreerupa Challa, Jarlath E. Nally, Carroll Jones, and Abhineet S. Sheoran (2011) 'Leptospira LPS-specific agglutinating but not non-agglutinating monoclonal antibodies prevent and protect from fatal pulmonary hemorrhages in guinea pigs'. Vaccine .  
Marques, Patricia X., O¿ Donovan, James, Souda Puneet, Gutierrez Jorge, Williams, Erin J., Worrall, Sheila, McElroy, Maire, Proctor, Aisling, Brady, Colm, Sammin, Donal, Basset, Hugh, Whitelegge Julian P., Markey, Bryan K., and Nally, Jarlath E. (2011) 'Amniotic and allantoic fluids from experimentally infected sheep contain immunoglobulin specific for Chlamydophila abortus'. Veterinary Immunology and Immunopathology .  
Goris MG, Wagenaar JF, Hartskeerl RA, van Gorp EC, Schuller S, Monahan AM, Nally JE, van der Poll T, van 't Veer C. (2011) 'Potent innate immune response to pathogenic leptospira in human whole blood'. PLoS ONE .  
Ruben Bonilla-Santiago and Jarlath E. Nally (2011) 'Rat model of chronic leptospirosis'. current protocols in microbiology .  
Dr Jens Erik Nielsen
Webb H, Tynan-Connolly BM, Lee GM, Farrell D, O'Meara F, Sondergaard CR, Teilum K, Hewage C, McIntosh LP, Nielsen LP (2011) 'Remeasuring HEWL pK(a) values by NMR spectroscopy: Methods, analysis, accuracy, and implications for theoretical pK(a) calculations'. Proteins, 79 (3):685-702.  
Johnston MA, Sondergaard CR, Nielsen JE (2011) 'Integrated prediction of the effect of mutations on multiple protein characteristics'. Proteins, 79 (1):165-178.  
Dr Peter O'Brien
Walsh EG, Maher S, Devocelle M, O'Brien PJ, Baird AW, Brayden DJ (2011) 'High content analysis to determine cytotoxicity of the antimicrobial peptide, melittin and selected structural analogs'. Peptides, 32 (9):1764-1773. Available Online  
Young, JK,Hall, RL,O'Brien, P,Strauss, V,Vahle, JL (2011) 'Best Practices for Clinical Pathology Testing in Carcinogenicity Studies'. Toxicologic Pathology, 39 :429-434.  
Professor Ronan O'Connell
Burke JP, Cunningham MF, Sweeney C, Docherty NG, O'Connell PR (2011) 'N-cadherin is overexpressed in Crohn's stricture fibroblasts and promotes intestinal fibroblast migration'. Inflammatory bowel diseases, 17 (8):1665-1673.  
Peirce C, O'Herlihy C, O'Connell PR, Jones JF (2011) 'Effect of injury on S1 dorsal root ganglia in an experimental model of neuropathic faecal incontinence'. The British journal of surgery, 98 (8):1155-1159.  
Griffin KM, Pickering M, O'Herlihy C, O'Connell PR, Jones JF (2011) 'Sacral nerve stimulation increases activation of the primary somatosensory cortex by anal canal stimulation in an experimental model'. The British journal of surgery, 98 (8):1160-1169.  
Medani M, Collins D, Docherty NG, Baird AW, O'Connell PR, Winter DC (2011) 'Emerging role of hydrogen sulfide in colonic physiology and pathophysiology'. Inflammatory bowel diseases, 17 (7):1620-1625.  
Joyce EA, Kavanagh DO, O'Connell PR, Hyland JM (2011) 'Massive intra-abdominal haemorrhage following stapled haemorrhoidopexy'. Colorectal disease : the official journal of the Association of Coloproctology of Great Britain and Ireland .  
Eogan M, O'Brien C, Daly L, Behan M, O'Connell PR, O'Herlihy C (2011) 'The dual influences of age and obstetric history on fecal continence in parous women'. International journal of gynaecology and obstetrics: the official organ of the International Federation of Gynaecology and Obstetrics, 112 (2):93-97.  
O'Connell PR (2011) 'Suboptimal outcome following sacral nerve stimulation for faecal incontinence (Br J Surg 2011; 98: 140-147)'. The British journal of surgery, 98 (1).  
Donohoe CL, Brannigan AE, O'Connell PR (2011) 'PALLIATIVE ENDOSCOPIC TRANS-ANAL RESECTION OF ADVANCED RECTOSIGMOID CARCINOMA'. The Irish Journal of Medical Science, 180 :541-544.  
Rowan F, Docherty NG, Murphy M, Murphy B, Calvin Coffey J, O'Connell PR. (2010) 'Desulfovibrio bacterial species are increased in ulcerative colitis'. Diseases of the Colon &Amp; Rectum, 53 (11):1530-1536.  
Medani M, Collins D, Docherty NG, Baird AW, O'Connell PR, Winter DC (2010) 'Emerging role of hydrogen sulfide in colonic physiology and pathophysiology'. Inflammatory bowel diseases .  
Donohoe CL, Brannigan AE, O'Connell PR. (2010) 'PALLIATIVE ENDOSCOPIC TRANS-ANAL RESECTION OF ADVANCED RECTOSIGMOID CARCINOMA'. Irish Journal of Medical Science .  
Dr John O'Connor
Watters O, O'Connor JJ (2011) 'A role for tumor necrosis factor-alpha in ischemia and ischemic preconditioning'. Journal of Neuroinflammation, 8 :87-98.  
Watters O, Pickering M, O'Connor J.J. (2011) 'Preconditioning effects of tumor necrosis factor-α and glutamate on calcium dynamics in rat organotypic hippocampal cultures'. Journal of Neuroimmunology, 234 (1-2):27-39.  
Dr Jim O'Gara
Cotter JJ, Maguire P, Soberon F, Daniels S, O'Gara JP, Casey E. (2011) 'Disinfection of meticillin-resistant Staphylococcus aureus and Staphylococcus epidermidis biofilms using a remote non-thermal gas plasma'. Journal of Hospital Infection, 78 (3):204-207. Available Online  
Rowe, S.E., Mahon, V., Smith, S.G. and O'Gara, J.P. (2011) 'A novel role for SarX in Staphylococcus epidermidis biofilm regulation'. Microbiology, 157 :1042-1049.  
Houston, P., Rowe, S.E., Pozzi, C., Waters, E.M. and O'Gara, J.P. (2011) 'An essential role for the major autolysin in the fibronectin-binding protein-mediated Staphylococcus aureus biofilm phenotype'. Infection and Immunity, 79 :1153-1165.  
Holland, L.M., Conlon, B. and O'Gara, J.P. (2011) 'Mutation of tagO reveals an essential role for wall teichoic acids in Staphylococcus epidermidis biofilm development'. Microbiology, 157 :408-418.  
Rawlinson L.B., O'Gara, J.P., Jones, D.S. and D.J. Brayden (2011) 'Resistance of Staphylococcus aureus to the cationic antimicrobial agent pDMAEMA is influenced by cell surface charge and hydrophobicity'. Journal of Medical Microbiology, 60 (7):968-976.  
Geoghegan, J.A., Corrigan, R.M.,Gruszka, D.T., Speziale, P., O'Gara, J.P., Potts, J.R. and T.J. Foster (2010) 'The role of surface protein SasG in biofilm formation by Staphylococcus aureus'. Journal of Bacteriology, 192 :5663-5673.  
Dr Francesca Paradisi
O'Sullivan, A. et al. (2011) 'Effects of supplementation with vitamin D3 on glucose production pathways in human subjects'. Molecular Nutrition and Food Research, 55 :1018-1025.  
Patil, S. et al. (2011) 'Novel Benzyl-Substituted N-Heterocyclic Carbene¿Silver Acetate Complexes: Synthesis, Cytotoxicity and Antibacterial Studies'. Metallomics, 3 :74-88.  
Patil, S. et al. (2010) 'Synthesis, Cytotoxicity and Antibacterial Studies of Novel Symmetrically and Non-Symmetrically 4-(Methoxycarbonyl)benzyl-Substituted N-Heterocyclic Carbene-Silver Acetate Complexes'. Helvetica Chimica Acta, 93 :2347-2364.  
Frimannsson, D.O. at al. (2010) 'Light Induced Anti-microbial Properties of a Brominated BF2 ¿ Chelated Tetraarylazadipyrromethene Photosensitizer'. Journal of medicinal chemistry, 53 :7337-7343.  
Professor William Powderly
Scherzer R, Heymsfield SB, Lee D, Powderly WG, Tien PC, Bacchetti P, Shlipak MG, Grunfeld C (2011) 'Decreased limb muscle and increased central adiposity are associated with 5-year all-cause mortality in HIV infection'. AIDS, 25 (11):1405-1414.  
Sax PE, Komarow L, Finkelman MA, Grant PM, Andersen J, Scully E, Powderly WG, Zolopa AR (2011) 'Blood (1->3)-beta-D-glucan as a diagnostic test for HIV-related Pneumocystis jirovecii pneumonia'. Clinical Infectious Diseases, 53 (2):197-202.  
Cotter AG, Powderly WG (2011) 'Endocrine complications of human immunodeficiency virus infection: hypogonadism, bone disease and tenofovir-related toxicity'. Clinical Endocrinology, 25 (3):501-515.  
Cotter EJ, Chew N, Doran PP, Powderly WG (2011) 'HIV type 1 alters Mesenchymal Stem Cell differentiation potential and phenotype ex vivo'. AIDS Research and Human Retroviruses, 27 :187-199.  
Professor Helen Roche
Perez-Martinez, P,Delgado-Lista, J,Garcia-Rios, A,Ferguson, JF,Gulseth, HL,Williams, CM,Karlstrom, B,Kiec-Wilk, B,Blaak, EE,Helal, O,Malczewska-Malec, M,Defoort, C,Riserus, U,Saris, WH,Lovegrove, JA,Drevon, CA,Roche, HM,Lopez-Miranda, J (2011) 'Calpain-10 interacts with plasma saturated fatty acid concentrations to influence insulin resistance in individuals with the metabolic syndrome'. American Journal of Clinical Nutrition, 93 :1136-1141.  
Tierney, AC,McMonagle, J,Shaw, DI,Gulseth, HL,Helal, O,Saris, WHM,Paniagua, JA,Golabek-Leszczynska, I,Defoort, C,Williams, CM,Karsltrom, B,Vessby, B,Dembinska-Kiec, A,Lopez-Miranda, J,Blaak, EE,Drevon, CA,Gibney, MJ,Lovegrove, JA,Roche, HM (2011) 'Effects of dietary fat modification on insulin sensitivity and on other risk factors of the metabolic syndrome-LIPGENE: a European randomized dietary intervention study'. International Journal of Obesity, 35 :800-809.  
Draper, E,Reynolds, CM,Canavan, M,Mills, KH,Loscher, CE,Roche, HM (2011) 'Omega-3 fatty acids attenuate dendritic cell function via NF-kappa B independent of PPAR gamma'. Journal of Nutritional Biochemistry, 22 :784-790.  
Perez-Martinez, P,Delgado-Lista, J,Garcia-Rios, A,Mc Monagle, J,Gulseth, HL,Ordovas, JM,Shaw, DI,Karlstrom, B,Kiec-Wilk, B,Blaak, EE,Helal, O,Malczewska-Malec, M,Defoort, C,Riserus, U,Saris, WHM,Lovegrove, JA,Drevon, CA,Roche, HM,Lopez-Miranda, J (2011) 'Glucokinase Regulatory Protein Genetic Variant Interacts with Omega-3 PUFA to Influence Insulin Resistance and Inflammation in Metabolic Syndrome'. PLoS ONE, 6 .  
Delgado-Lista, J,Perez-Martinez, P,Garcia-Rios, A,Phillips, CM,Williams, CM,Gulseth, HL,Helal, O,Blaak, EE,Kiec-Wilk, B,Basu, S,Drevon, CA,Defoort, C,Saris, WH,Wybranska, I,Riserus, U,Lovegrove, JA,Roche, HM,Lopez-Miranda, J (2011) 'Pleiotropic effects of TCF7L2 gene variants and its modulation in the metabolic syndrome: From the LIPGENE study'. Atherosclerosis, 214 :110-116.  
van Hees, AMJ,Jans, A,Hul, GB,Roche, HM,Saris, WHM,Blaak, EE (2011) 'Skeletal Muscle Fatty Acid Handling in Insulin Resistant Men'. Obesity, 19 :1350-1359.  
McGillicuddy, FC,Harford, KA,Reynolds, CM,Oliver, E,Claessens, M,Mills, KHG,Roche, HM (2011) 'Lack of Interleukin-1 Receptor I (IL-1RI) Protects Mice From High-Fat Diet Induced Adipose Tissue Inflammation Coincident With Improved Glucose Homeostasis'. Diabetes, 60 :1688-1698.  
Jans A, Sparks LM, van Hees AM, Gjelstad IM, Tierney AC, Risérus U, Drevon CA, Roche HM, Schrauwen P, Blaak EE. (2011) 'Transcriptional metabolic inflexibility in skeletal muscle among individuals with increasing insulin resistance'. Obesity, 19 (11):2158-2166.  
Phillips CM, Goumidi L, Bertrais S, Field MR, McManus R, Hercberg S, Lairon D, Planells R, Roche HM. (2011) 'Gene-nutrient interactions and gender may modulate the association between ApoA1 and ApoB gene polymorphisms and metabolic syndrome risk'. Atherosclerosis, 214 (2):408-415.  
Garcia-Rios A, Delgado-Lista J, Perez-Martinez P, Phillips CM, Ferguson JF, Gjelstad IM, Williams CM, Karlström B, Kie?-Wilk B, Blaak EE, Lairon D, Planells R, Malczewska-Malec M, Defoort C, Riserus U, Saris WH, Lovegrove JA, Drevon CA, Roche HM, Lopez-Miranda J. (2011) 'Genetic variations at the lipoprotein lipase gene influence plasma lipid concentrations and interact with plasma n-6 polyunsaturated fatty acids to modulate lipid metabolism'. Atherosclerosis, 218 (2):416-422.  
Phillips CM, Goumidi L, Bertrais S, Field MR, Cupples LA, Ordovas JM, McMonagle J, Defoort C, Lovegrove JA, Drevon CA, Blaak EE, Kiec-Wilk B, Riserus U, Lopez-Miranda J, McManus R, Hercberg S, Lairon D, Planells R, Roche HM (2010) 'ACC2 gene polymorphisms, metabolic syndrome, and gene-nutrient interactions with dietary fat'. Journal of lipid research, 51 (12):3500-3507.  
O'Connor A, Gibney J, Roche HM (2010) 'Metabolic and hormonal aspects of polycystic ovary syndrome: the impact of diet'. The Proceedings of the Nutrition Society, 69 (4):628-635.  
Morine MJ, McMonagle J, Toomey S, Reynolds CM, Moloney AP, Gormley IC, O Gaora P, Roche HM (2010) 'Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of metabolic syndrome'. BMC Bioinformatics, 11 (1).  
iménez-Gómez Y, Marín C, Peérez-Martínez P, Hartwich J, Malczewska-Malec M, Golabek I, Kiec-Wilk B, Cruz-Teno C, Rodríguez F, Gómez P, Gómez-Luna MJ, Defoort C, Gibney MJ, Pérez-Jiménez F, Roche HM, López-Miranda J. (2010) 'A low-fat, high-complex carbohydrate diet supplemented with long-chain (n-3) fatty acids alters the postprandial lipoprotein profile in patients with metabolic syndrome'. Journal of Nutrition, 140 (9):1595-1601.  
Professor Pauline Rudd
Marino, K.,Bones, J.,Kattla, J. J.,Rudd, P. M. (2010) 'A systematic approach to protein glycosylation analysis: a path through the maze'. Nature Chemical Biology, 6 (10):713-723. Available Online  
Liu, L.,Telford, J. E.,Knezevic, A.,Rudd, P. M. (2010) 'High-throughput glycoanalytical technology for systems glycobiology'. Biochemical Society Transactions, 38 (55):1374-71374. Available Online  
Pierce, A.,Saldova, R.,Abd Hamid, U. M.,Abrahams, J. L.,McDermott, E. W.,Evoy, D.,Duffy, M. J.,Rudd, P. M. (2010) 'Levels of specific glycans significantly distinguish lymph node-positive from lymph node-negative breast cancer patients'. Glycobiology, 20 (10):1283-1288. Available Online  
Stanta, J. L.,Saldova, R.,Struwe, W. B.,Byrne, J. C.,Leweke, F. M.,Rothermund, M.,Rahmoune, H.,Levin, Y.,Guest, P. C.,Bahn, S.,Rudd, P. M. (2010) 'Identification of N-glycosylation changes in the CSF and serum in patients with schizophrenia'. Journal of Proteome Research, 9 (99):4476-4489. Available Online  
Professor Jeremy Simpson
Tängemo, C., Ronchi, P., Colombelli, J., Haselmann, U., Simpson, J.C., Antony, C., Stelzer, E.H.K., Pepperkok, R. and Reynaud, E.G. (2011) 'A Novel Laser Nanosurgery Approach Provides Support for de novo Golgi Biogenesis in Mammalian Cells'. Journal of Cell Science, 124 :978-987.  
Dr Albert Smolenski
Beyer S, Lakshmanan A, Liu YY, Zhang X, Wapnir I, Smolenski A, Jhiang S (2011) 'KT5823 differentially modulates sodium iodide symporter expression, activity, and glycosylation between thyroid and breast cancer cells'. Endocrinology, 152 (3):782-792.  
Keane C, Tilley D, Cunningham A, Smolenski A, Kadioglu A, Cox D, Jenkinson HF, Kerrigan SW (2010) 'Invasive Streptococcus pneumoniae trigger platelet activation via Toll-like receptor 2'. Journal of Thrombosis and Haemostasis, 8 (12):2757-2765.  
Dr Matthias Tacke
J. Zagerman, A. Deally, N. Metzler-Nolte, H. Müller-Bunz, D. Wallis, M. Tacke (2011) 'Towards Protein-Substituted Titanocene Anticancer Drugs'. Polyhedron, 30 :2387-2390.  
S. Patil, M. Tacke (2011) 'NHC-Silver(I) Acetates as Bioorganometallic Anticancer and Antibacterial Drugs'. Insights into Coordination, Bioinorganic and Applied Inorganic Chemistry, :555-566.  
I. Fichtner, D. Behrens, J. Claffey, A. Deally, S. Patil, H. Weber, M. Tacke (2011) 'The Antiangiogenic and Antitumoral Activity of Titanocene Y* in vivo'. Letters in Drug Design & Discovery, 8 (4):302-307.  
L. M. Menéndez Méndez, A. Deally, D. F. O'Shea, M. Tacke (2011) 'Synthesis and Cytotoxicity Studies of Azaindole-Substituted Titanocenes'. Heterotam Chemistry, 22 (2):148-157. Available Online  
A. Deally, B. Gleeson, H. Müller-Bunz, S. Patil, D. F. O¿Shea, M. Tacke (2011) 'Novel Achiral Indole-Functionalised Titanocenes: Synthesis and Preliminary Cytotoxicity Studies'. Journal of Organometallic Chemistry, 696 :1072-1083.  
S. Patil, A. Deally, B. Gleeson, F. Hackenberg, H. Müller-Bunz, F. Paradisi, M. Tacke (2011) 'Synthesis, Cytotoxicity and Antibacterial Studies of Novel Symmetrically and Non-Symmetrically p-Nitrobenzyl-Substituted N-Heterocyclic Carbene-Silver(I) Acetate Complexes'. ZAAC, 637 :386-396.  
S. Cuffe, C. M. Dowling, J. Claffey, C. Pampillón, M. Hogan, J. M. Fitzpatrick, M. P. Carty, M. Tacke, R. W. G. Watson (2011) 'Effects of Titanocene Dichloride Derivatives on Prostate Cancer Cells, Specifically DNA Damage Induced Apoptosis'. Prostate, 71 :111-124.  
S. Patil, A. Deally, B. Gleeson, H. Müller-Bunz, F. Paradisi, M. Tacke (2011) 'Novel Benzyl-Substituted N-Heterocyclic Carbene¿Silver Acetate Complexes: Synthesis, Cytotoxicity and Antibacterial Studies'. Metallomics, 3 :74-88.  
S. Patil, K. Dietrich, A. Deally, B. Gleeson, H. Müller-Bunz, F. Paradisi, M. Tacke (2010) 'Synthesis, Cytotoxicity and Antibacterial Studies of Novel Symmetrically and Non-Symmetrically Methyl Benzoate-Substituted N-Heterocyclic Carbene-Silver Acetate Complexes'. Helvetica Chimica Acta, 93 :2347-2364.  
B. Gleeson, S. Patil, A. Deally, H. Müller-Bunz, M. Tacke (2010) 'Novel Achiral Aryl-Substituted Vanadocenes: Synthesis and Preliminary Cytotoxicity Studies'. Australian Journal of Chemistry, 63 :1514-1520.  
J. Claffey, A. Deally, B. Gleeson, S. Patil, M. Tacke (2010) 'Synthesis and Cytotoxicity Studies of Novel Anion-Exchanged Titanocene Y Derivatives'. Applied Organometallic Chemistry, 24 :675-679.  
M. Hogan, M. Tacke (2010) 'Titanocenes - Cytotoxic and Anti-Angiogenic Chemotherapy Against Advanced Renal-Cell Cancer'. Topics in Organometallic Chemistry: Medicinal Organometallic Chemistry, 32 :119-140.  
S. Patil, A. Deally, B. Gleeson, H. Müller-Bunz, F. Paradisi, M. Tacke (2010) 'Synthesis, Cytotoxicity and Antibacterial Studies of Symmetrically and Non-Symmetrically Benzyl- or p-Cyanobenzyl-Substituted N-Heterocyclic Carbene-Silver Complexes'. Applied Organometallic Chemistry, 24 :781-793.  
B. Gleeson, M. Hogan, H. Müller-Bunz, M. Tacke (2010) 'Synthesis and Preliminary Cytotoxicity Studies of Indole-Substituted Vanadocenes'. Transition Metal Chemistry, 35 :973-983.  
Professor Cormac Taylor
Taylor CT, Cummins EP (2011) 'Regulation of gene expression by carbon dioxide'. The Journal of physiology, 589 (Pt 4):797-803.  
Fitzpatrick, S. F., Tambuwala, M. M., Bruning, U., Schaible, B., Scholz, C. C., Byrne, A., O'Connor, A., Gallagher, W. M., Lenihan, C. R., Garvey, J. F., Howell, K., Fallon, P. G., Cummins, E. P., and Taylor, C. T. (2011) 'An intact canonical NF-kB pathway is required for inflammatory gene expression in pesponse to hypoxia'. Journal of Immunology, 186 (2):1091-1096.  
Bruning U, Cerone L, Neufeld Z, Fitzpatrick SF, Cheong A, Scholz CC, Simpson DA, Leonard MO, Tambuwala MM, Cummins EP, Taylor CT (2011) 'MicroRNA-155 Promotes Resolution of Hypoxia-Inducible Factor-1{alpha} Activity During Prolonged Hypoxia''. Molecular Cell Biology, 31 .  
Agbor TA, Cheong A, Comerford KM, Scholz CC, Bruning U, Clarke A, Cummins EP, Cagney G, Taylor CT (2010) 'Small ubiquitin-related modifier (SUMO)-1 protein modification promotes glycolysis in Hypoxia'. Journal of Biological Chemistry .  
Dr Emma C Teeling
Puechmaille, S., Fuller, H., and Teeling, E.C. (2011) 'Effect of sample preservation methods on the viability of Geomyces destructans, the fungus associated with white-nose syndrome in bats'. Acta Chiropterologica, 13 (1):217-222.  
Puechmaille, S., Wibbelt, G., Korn, V., Fuller, H., Forget, F., Mühldorfer, K., Kurth, A., Bogdanowicz, W., Borel, C., Bosch, T., Cherezy, T., Drebet, M., Görföl, T., Haarsma, A-J., Herhaus, F., Hallart, G., Hammer, M., Jungmann, C., Le Bris, Y., Lutsar, L., Masing, M., Mulkens, B., Passior, K., Starrach, M., Wojtaszewski, A., Zöphel, U. and Teeling, E.C. (2011) 'Pan-European distribution of white-nose syndrome fungus (Geomyces destructans) not associated with mass mortality'. PLoS ONE, 6(4) e19167 . Available Online  
Buckley, D., Puechmaille, S., Roche, N. and Teeling, E. (2011) 'A critical assessment of the presence of Barbastella barbastellus and Nyctalus noctula in Ireland with a description of N. leisleri echolocation calls from Ireland'. Hystrix - Italian Journal of Mammalogy, 22 (1):111-127.  
Dr Douglas Veale
Biniecka M, Fox E, Gao W, Ng CT, Veale DJ, Fearon U, O'Sullivan J (2011) 'Hypoxia induces mitochondrial mutagenesis and dysfunction in inflammatory arthritis'. Arthritis and rheumatism, 63 (8):2172-2182.  
Huang A, Harty LC, Ryan CM, Veale DJ (2011) 'Clinical images: infliximab therapy of polyarticular small joint sarcoid arthritis'. Arthritis and rheumatism, 63 (7).  
Biniecka M, Kennedy A, Ng CT, Chang TC, Balogh E, Fox E, Veale DJ, Fearon U, O'Sullivan JN (2011) 'Successful tumour necrosis factor (TNF) blocking therapy suppresses oxidative stress and hypoxia-induced mitochondrial mutagenesis in inflammatory arthritis'. Arthritis Research & Therapy, 13 (4).  
Connolly M, Veale DJ, Fearon U (2011) 'Acute serum amyloid A regulates cytoskeletal rearrangement, cell matrix interactions and promotes cell migration in rheumatoid arthritis'. Annals of the rheumatic diseases, 70 (7):1296-1303.  
Veale DJ (2011) 'New therapies and new goals for psoriatic arthritis'. Arthritis and rheumatism, 63 (4):874-876.  
Kennedy A, Ng CT, Chang TC, Biniecka M, O'Sullivan JN, Heffernan E, Fearon U, Veale DJ (2011) 'Tumor necrosis factor blocking therapy alters joint inflammation and hypoxia'. Arthritis and rheumatism, 63 (4):923-932.  
van de Sande MG, Gerlag DM, Lodde BM, van Baarsen LG, Alivernini S, Codullo V, Felea I, Vieira-Sousa E, Fearon U, Reece R, Montecucco C, Veale DJ, Pitzalis C, Emery P, Klareskog L, McInnes IB, Tak PP (2011) 'Evaluating antirheumatic treatments using synovial biopsy: a recommendation for standardisation to be used in clinical trials'. Annals of the rheumatic diseases, 70 (3):423-427.  
Nic An Ultaigh S, Saber TP, McCormick J, Connolly M, Dellacasagrande J, Keogh B, McCormack W, Reilly M, O'Neill LA, McGuirk P, Fearon U, Veale DJ (2011) 'Blockade of Toll-like receptor 2 prevents spontaneous cytokine release from rheumatoid arthritis ex vivo synovial explant cultures'. Arthritis Research & Therapy, 13 (1).  
Moran EM, Heydrich R, Ng CT, Saber TP, McCormick J, Sieper J, Appel H, Fearon U, Veale DJ (2011) 'IL-17A Expression Is Localised to Both Mononuclear and Polymorphonuclear Synovial Cell Infiltrates'. PLoS ONE, 6 (8).  
Saber T, Veale DJ, Balogh E, McCormick J, NicAnUltaigh S, Connolly M, Fearon U (2011) 'Toll-like receptor 2 induced angiogenesis and invasion is mediated through the Tie2 signalling pathway in rheumatoid arthritis'. PLoS ONE, 6 (8).  
Rooney T, Edwards CK 3rd, Gogarty M, Greenan L, Veale DJ, FitzGerald O, Dayer JM, Bresnihan B (2010) 'Synovial tissue rank ligand expression and radiographic progression in rheumatoid arthritis: observations from a proof-of-concept randomized clinical trial of cytokine blockade'. Rheumatology international, 30 (12):1571-1580.  
Professor Matthias Wilm
Wilm, M (2011) 'Principles of Electrospray Ionization'. Molecular & Cellular Proteomics, 10 (7). Available Online  
Dr Xiangming Zhu
A. E. Hogan, V. O'Reilly, M. R. Dunne, R. T. Dere, S. G. Zeng, C. O'Brien, S. Amu, P. G. Fallon, M. A. Exley, C. O'Farrelly, X. Zhu, D. G. Doherty (2011) 'Activation of human invariant natural killer T cells with a thioglycoside analogue of alpha-GalCer'. Clinical Immunology, 140 (2):196-207.  
Dr Tadhg Ó'Cróinín
Mangan MW, Lucchini S, O Croinin T, Fitzgerald S, Hinton JC and Dorman CJ (2011) 'The nucleoid-associated protein HU controls three regulons that coordinate virulence, response to stress and general physiology in Salmonella enterica serovar Typhimurium'. Microbiology .  
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Other Journals
Professor Billy Bourke
Rowland M, Bourke B. (2011) 'Liver disease in cystic fibrosis' Current Opinion in Pulmonary Medicine, 17 :461-466.  
Hussey S, Fleming P, Rowland M, Harty S, Chan L, Broderick A, Drumm B, Bourke B (2011) 'Disease outcome for children who present with Crohns disease' European Archives of Paediatric Dentistry, 12 :169-171.  
Professor William Powderly
Powderly WG (2011) 'When to start antiretroviral therapy ¿ asking the right question' Future Virology, 6 :401-403.  
Cotter A, Powderly WG. (2011) 'Endocrine complications of human immunodeficiency virus Infection. Hypogonadism, bone disease and tenofovir-related toxicity' Best Practice & Research Clinical Endocrinology & Metabolism, 25 :501-505.  
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Conference Publications
Professor Mohamed Al-Rubeai
Tan F., Naciri M., Al-Rubeai (2010) In Vitro Osteoblastic Cell Activity on Bioglass-derived Bioceramic Surfaces Deposited by a Novel CoBlast Technique 14th International Biotechnology Symposium and Exhibition, Rimini, Italy,  
Professor Alan Baird
Maher, S., Walsh, E. G., Bahar, B, Baird, A. W. & Brayden, D. J. (2011) Investigations of intestinal epithelial compensatory responses to permeation enhancement caused by sodium caprate (C10) . In: Selected Podium Session, Abstract 179 eds. Transactions of the 38th Int. Soc. Controlled Release Society, Maryland,  
Professor David Brayden
Petersen, S. B, Nolan, G., Maher, S., Rahbek, U. L., Guldbrandt, M., & Brayden, D. J. (2011) Tetradecylmaltoside is a permeability enhancer: isolated rat colonic mucosae in Ussing chambers Transactions of the 38th Int. Soc. Controlled Release Society, Maryland, Abstract 759,  
Walsh, E. G., Leonard, T. W. & Brayden, D. J. (2011) High-content analysis (HCA) for determination of potential cytotoxicity effects of sodium caprate (C10) on Caco-2 cells Transactions of the 38th Int. Soc. Controlled Release Society, Maryland, Abstract 821,  
Ahmad, T., Simpson, J. C. & Brayden, D.J. (2011) Uptake of glucan particles via dectin-1 receptor mediated endocytosis in Peyer¿s patches? Transactions of the 38th Int. Soc. Controlled Release Society, Maryland, Abstract 524,  
Aguirre, T., Rosa, M. Coulter, I., & Brayden, D. J. (2011) Enhancement of Intestinal Absorption of Salmon Calcitonin Using a Novel Liquid Emulsion Drug Delivery System ¿ LEDDS® Transactions of the 38th Int. Soc. Controlled Release Society, Maryland, Abstract 687,  
Maher, S., Walsh, E. G., Bahar, B, Baird, A. W. & Brayden, D. J. (2011) Investigations of intestinal epithelial compensatory responses to permeation enhancement caused by sodium caprate (C10) . In: Selected Podium Session, Abstract 179 eds. Transactions of the 38th Int. Soc. Controlled Release Society, Maryland,  
Dr Lorraine Brennan
Monahan FJ, Moloney AP, Osorio, MT, Röhrle F, Schmidt O and Brennan L (2011) Authentication of grass-fed beef using bovine muscle, hair or urine Food Integrity and Traceability Conference, Belfast, 33  
Professor Alexander Evans
K Pluta, JA Irwin, ME Gallagher, ACO Evans, SD Carrington (2011) Activity of Glycosidases in Bovine Cervical Mucus Changes During Oestrous Cycle 44th Annual Meeting of the Society for the Study of Reproduction, Portland, Oregon, 349  
F Mossa, SW Walsh, TB Hildebrandt, DA Kenny, P Lonergan, GW Smith, JJ Ireland, ACO Evans (2011) Evidence that undernutrition during the first trimester of pregnancy influences development and function of the cardiovascular system in female offspring in cattle 44th Annual Meeting of the Society for the Study of Reproduction, Portland, Oregon, 281  
S Walsh JP Mehta, JA Browne, N Forde, PA McGettigan, M Mihm, B Loftus, MA Crowe, ACO Evans (2011) Differences in gene expression in preovulatory follicles after the LH surge in dairy heifers versus lactating cows 44th Annual Meeting of the Society for the Study of Reproduction, Portland, Oregon, 631  
GB Duffy, P McGettigan, JA Browne, N Mansouri-Attia, G Charpigny, O Sandra, BJ Loftus, J Roche, M Crowe, P Lonergan, ACO Evans (2011) Next generation sequencing identifies novel interferon stimulated genes in the uterine endometrium of cattle during early pregnancy 44th Annual Meeting of the Society for the Study of Reproduction, Portland, Oregon, 370  
MP Mullen, ACO Evans, G Elia, M Hilliard, N Forde, MH Parr, MG Diskin, MA Crowe (2011) Temporal changes in the proteome of the uterine histotroph in cattle Meeting of the American Animal Science Association and the American Dairy Science Association, New Orleans, USA,  
F Mossa, SW Walsh, DA Kenny, P Lonergan, GW Smith, JJ Ireland, ACO Evans (2011) Impact of undernutrition on circulating testosterone and cortisol concentrations during pregnancy of cattle GEMINI Group III Workshop, Batsheva de Rothshild Seminar on: Periconceptional developmental programming, Jerusalem, Israel, 14  
K Pluta, P McGettigan, J Browne, C Reid, AC Evans, SD Carrington (2011) Mucin biosynthesis in the bovine cervix 11th International Workshop on Carcinoma-associated Mucins, Cambridge, UK,  
Dublin, Ireland, 5 to 7 January 2011. Poster P142 (2011) Global characterisation of proteins in bovine uterine histotroph Agriculture Research Forum, Tullamore, Ireland, 155  
IA Hutchinson, P Lonergan, ACO Evans, RJ Dewhurst, ST Butler (2011) The effect of dietary polyunsaturated fatty acids on follicle development, corpus luteum volume and circulating progesterone in lactating dairy cows Agriculture Research Forum, Tullamore, Ireland, 157  
D Matthews, DG Morris, C Creevey, DA Kenny, SM Waters, MS McCabe, ACO Evans, DG Diskin (2011) Effect of short term dietary restriction on gene expression in the bovine hypothalamus using next generation sequencing Agriculture Research Forum, Tullamore, Ireland, 156  
L Richardson, JP Hanrahan, S Fair, SD Carrington, P Lonergan, ACO Evans (2011) The effect of ewe breed on sialic acid content of the cervix Agriculture Research Forum, Tullamore, Ireland,  
SB Cummins, P Lonergan, ACO Evans, ST Butler (2011) The effect of genetic merit for fertility traits on body condition score, milk production, and hormonal and metabolic profiles Agriculture Research Forum, Tullamore, Ireland, 160  
K Pluta, M Gallagher, J Browne, P McGettigan, M Crowe, J Roche, A Evans, S Carrington (2011) Changes in galectin 3 in the cervix and it secretions about the time of oestrus in heifers Fertility 2011. A joint meeting of UK and Irish Fertility Organizations (ACE, BFS, SRF, ICE, IFS), Dublin, Ireland, P142  
BA Murphy, C Blake, A-M Martin, N Forde, JA Browne, ACO Evans (2010) Temporal patterns of circadian clock gene expression differ between stroma and dominant follicles in periovulatory ovine ovaries 8th International Ruminant Reproduction Symposium,  
EJ Williams, RA Law, HS Gilmore, F Carter, S Cody, CP Ferris, CS Mayne, P Lonergan, JF Roche, MG Diskin, FJ Young, MA Crowe and ACO Evans (2010) Uterine infection is associated with decreased mRNA for IGF-1 in liver and increased negative energy balance in post partum cows 8th International Ruminant Reproduction Symposium,  
K Pluta, C Dolphin, T Tharmalingam, ACO Evans, SD Carrington (2010) Biochemical and topographical changes in glycoconjugates of the cervical epithelium associated with the onset of oestrus in cattle 8th International Ruminant Reproduction Symposium,  
F Mossa, ST Butler, DP Berry, F Jimenez-Krassel, P Lonergan, GW Smith, JJ Ireland, ACO Evans (2010) Number of follicles during follicular waves is positively associated with fertility in dairy cows 8th International Ruminant Reproduction Symposium,  
SW Walsh, EJ Williams, PA McGettigan, JP Mehta, JA Browne, ACO Evans (2010) The effect of postpartum uterine infection on subsequent preovulatory follicle gene expression during the breeding season in postpartum cows 8th International Ruminant Reproduction Symposium,  
Professor Oliver Fitzgerald
Reid A, Brady A, Cusack T, Blake C, Monget AB, Veale D, FitzGerald O. (2010) Improvements in Function Following Dynamic Exercise in Patients with RA taking anti-TNFα Therapy Reflected in Lower Limb Function Tests but not the HAQ American College of Rheumatologists, Atlanta, USA,  
Ryan J, NG CT, Gibney R, Fitzgerald O, Brennan P, Hefferenan E, Fearon U, McNulty J, Rainford L, Veale D (2010) Novel PET/MR Fusion Imaging and Quantification of Knee Synovitis in Rheumatoid Arthritis American College of Rheumatology Annual Scientific Meeting, Atlanta, USA, Available Online  
Professor William Gallagher
Dolan, R.T., Penny, S., Kelly, C.M., (Kelly, Brennan, D.J., Rexhepaj, E., Jirstrom, K., Ponten, F., Uhlen, M., Gallagher, W.M., Kell, M.R (2011) Development of immunohistochemical surrogates for prediction of breast cancer patient outcome via high-throughput antibody generation and validation using tissue microarray technology The Annual Meeting of the Society of Academic and Research Surgery, 1 - 5  
Hayley, D., McKeen, H. D., Brennan, D. J., Hegarty, S., Lanigan, F., Jirstrom, K., Byrne, C., Yakkundi, A., McCarthy, H. O., Gallagher, W. M., and Robson, T. (2011) The emerging role of FK506-binding proteins as cancer biomarkers: a focus on FKBPL . In: Konstantin Panov (Queen's University Belfast, U.K.) and Paul Thompson (University of Ulster, Coleraine, U.K.) eds. Biochemical Society Irish Area Section Meeting - Signalling and Disease, 663 - 668  
Maher, S.G., McDowell, D.T., Murphy, S.A., Collins, B.C., Muldoon, C., Gallagher, W.M., Reynolds, J.V. (2011) Pre-treatment complement system serum protein levels predict response to neoadjuvant chemoradiation for oesophageal cancer The Annual Meeting of the Society of Academic and Research Surgery, 1 - 5  
Dahlman, A.K., Rexhepaj, E; Brennan, D.J., Gallagher, W.M., Gaber, A., Lindgren, A., Jirstrom, K., Bjartell, A. (2011) Automated image analysis confirms the predictive significance of MSMB in prostate cancer 26 Annual Congress of the European Association of Urology, I - XIV  
Professor Therese Kinsella
Mulvaney EP, Reid HM & B.T. Kinsella BT. (2011) Interaction of angio-associated migratory cell protein with the TPα and TPβ isoforms of the human thromboxane A2 receptor . In: FASEB J eds. Experimental Biology 2011, Washington DC, 25 - 1008.1 Available Online  
Mulvaney EP, Reid HM & B.T. Kinsella BT. (2011) Interaction of angio-associated migratory cell protein with the TPα and TPβ isoforms of the human thromboxane A2 receptor Prospects and Challenges for Therapeutic Targeting of Epoxyeicosanoids Minisymposium at Experimental Biology 2011, Washington DC, . - .  
Turner EC, Mulvaney EP, Reid HM & B.T. Kinsella BT. (2011) The human prostacyclin receptor contains a novel Rab11 binding domain that is regulated by . In: The FASEB Journal eds. Experimental Biology 2011, Washington DC, 25 - 628.8 Available Online  
Professor Patrick Lonergan
Aparicio, I. M. Garcia-Herreros, M. O'Shea, L. C. Hensey, C. Lonergan, P. Fair, T. (2011) Role of Progestrone and it's receptors on developmental competence of Oocytes in Cattle Reproduction and Fertility Development, Reproduction, Fertility and Development, 23, 227 - 227  
Mansouri-Attia N, Oliveira LJ, Carter F, Forde N, Lonergan P, Fair T (2010) Synergistic actions of the interferon-tau (IFN-tau) on endometrium and peripheral blood mononuclear cells (PBMC) are modulating immune factors during early pregnancy in cattle 8th European Congress on Reproductive Immunology,  
Professor Paul McLoughlin
Coyle-Rowan S, Cahill E, Harkin S, Costello CM, Howell K, Martin F, McLoughlin P (2010) Hypoxic upregulation of the BMP antagonist gremlin1 contributes to the development of pulmonary hypertension Physiological Society Conference Birmingham 2010,  
Dr Tara McMorrow
Robert Radford, Craig Slattery, Michael Ryan, Tara McMorrow (2010) Deciliation of Kidney Epithelial Cells Is an Early marker of Carcinogenic Effects American Society of Cell Biology,  
Dr Evelyn Murphy
Viviana Marzaioli, Jason P. McMorrow, Alice McEvoy and Evelyn P. Murphy. (2010) Histamine contributes to inflammatory joint disease by regulating the expression of RANKL and OPG through altered NR4A activity in human chondrocyte cells Arthritis and Rheumatism, 62 (10)1482, 1482  
Jason P. McMorrow, Evelyn P. Murphy, Bruce N. Cronstein. (2010) Identification of the NR4A family of orphan nuclear receptors as mediators of adenosine A2A receptor activation Arthritis and Rheumatism, 62(10)1522, 1522  
Dr Peter O'Brien
Khalil, M.I., O'Brien, P., Kiely, G. and Mueller, C. (2011) High spatial resolution data for land use-soil type can reliably estimate baseline organic carbon stocks in agricultural soils International Symposium on Soil organic Matter: Organic Matter Dynamics - from Soils to Oceans, Leuven, Belgium, 107  
Khalil, M.I., O'Brien, P., Kiely, G. and Mueller, C. (2011) Empirical estimation of organic carbon stocks fro agricultural soils in the Republic of Ireland European Geosciences General Assembly 2011,  
Khalil, M.I., O'Brien, P., Kiely, G. and Mueller, C. (2011) Empirical estimation of baseline organic carbon stocks for agricultural soils in the ROI Agricultural Research Forum 2011, Tullamore,  
Dr John O'Connor
Corcoran AE, O'Connor JJ (2010) Acute effects of prolyl hydroxylase inhibiton on synaptic transmission and plasticity in the hippocampal rat slice Royal Academy of medicine in Ireland Biomedical sciences section annual meeting 2010,  
Watters O, O'Connor JJ (2010) TNF-a And Glutamate Preconditioning Effects On Calcium Dynamics In Rat Hippocampal Cultures Winter Meeting British Pharmacology Society,  
Watters O, O'Connor JJ (2010) Modulatory effects of TNFalpha and glutamate pretreatment on calcium homeostasis and glutamate-induced calcium influx in rat organotypic hippocampal cultures Royal academy of medicine in Ireland biomedical sciences section annual meeting 2010,  
Corcoran A, O'Connor JJ (2010) The effects of hypoxia, prolyl hydroxylase inhibition and TNF-alpha on synaptic transmission in the rat hippocampus Winter Meeting British Pharmacology Society,  
Batti, L., Taylor, C., O'Connor, J.J. (2010) A role for the prolyl hydroxylase inhibitor, DMOG, on synaptic transmission and neuroprotection in an ex vivo model of cerebral ischaemia Neuroscience Ireland Meeting,  
Corcoran A.E., O'Connor JJ (2010) Acute effects of proyly hydroxylase inhibition on synaptic transmission and plasticity in the rat hippocampal slice RCSI June, Irish Journal of Medical Science,  
Sheridan, G.K., Pickering, M., Halley, P., O'Sullivan, N.C., O'Connor, J.J., Murphy, K.J. (2010) The chemokine, fractalkine (CX3CL1), modulates synaptic plasticity and is upregulated in the rat hippocampus following a spatial learning task Neuroscience Ireland Meeting,  
Watters O, O'Connor JJ (2010) TNF-α And Glutamate preconditioning attenuates calcium mediated activity in the ca region of rat organotypic hippocampal cultures Neuroscience Ireland meeting UCD (Sept) Irish Journal of Medical Science,  
Sheridan, G.K., Pickering, M., O'Connor, J.J., Moynagh, P.N., Murphy, K.J. (2010) Similar temporal oscillations in hippocampal NF-kB following spatial learning in rats and high-frequency stimulation of organotypic slice cultures Neuroscience Ireland Meeting, TCD. Irish Journal of Medical Science,  
Sheridan, G.K., Pickering, M., O'Connor, J.J., Moynagh, P.N., Murphy, K.J. (2010) Similar temporal oscillations in hippocampal NF-kB following spatial learning in rats and high-frequency stimulation of organotypic slice cultures Neuroscience Ireland Meeting,  
Professor Pauline Rudd
Tharmalingam T, Li L, Mariño K, Abrahams J1, Doherty M1, Bones J1, O¿Donoghue N, Carrington SD, Rudd PM (2010) The development of a high throughput system for O-glycan analysis 2010 Annual Meeting of the Society for Glycobiology St Petersburg, FL,  
Dr Douglas Veale
Reid A, Brady A, Cusack T, Blake C, Monget AB, Veale D, FitzGerald O. (2010) Improvements in Function Following Dynamic Exercise in Patients with RA taking anti-TNFα Therapy Reflected in Lower Limb Function Tests but not the HAQ American College of Rheumatologists, Atlanta, USA,  
Ryan J, NG CT, Gibney R, Fitzgerald O, Brennan P, Hefferenan E, Fearon U, McNulty J, Rainford L, Veale D (2010) Novel PET/MR Fusion Imaging and Quantification of Knee Synovitis in Rheumatoid Arthritis American College of Rheumatology Annual Scientific Meeting, Atlanta, USA, Available Online  
Dr Tadhg Ó'Cróinín
E. Scanlan, C. Shortt, B. Bourke and T. O Croinin (2011) DNA supercoiling in Campylobacter jejuni : A potential global regulator of invasion SGM Irish Branch Meeting - Microbial pathogenesis the key to better therapies, Institute of Technology Tallaght,  
C. Shortt, E. Scanlan, B. Bourke and T. O Croinin (2011) Transcriptional regulation of chemotaxis and motility through DNA supercoiling SGM Irish Branch Meeting - Microbial pathogenesis the key to better therapies, Institute of Technology Tallaght,  
C. Shortt, Scanlan E, Bourke B and O Croinin T (2011) The role of DNA supercoiling in the regulation of motility in Campylobacter jejuni SGM Irish Branch Meeting - Microbial Viruses: Genomics Evolution and Application in Ecology, Biotechnology and Medicine, Queens University Belfast,  
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Published Reports
Professor David Brayden
Brayden, D. J., Armstrong, G., O¿Driscoll, C. M. (2010) The 2nd Annual Irish Drug Delivery Network Conference with UK and Ireland Controlled Release Society-Advancing Drug Delivery. Informa, London.  
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Other Publications
Professor Patrick Guiry
P. J. Guiry (2011) Catalytic Asymmetric Synthesis,, 3rd Edition by I. Ojima. ChemCatChem: Book Reviews.  
Professor Jonathan Malthouse
Malthouse JPG (2010) Review of Pain Free Biochemistry by PC Engel, Wiley-Blackwell. Irish Medical Journal 2010 103, 287: Book Reviews.  
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