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"Vision". Image by Ms Marijke Beltman.

"Vision". Image by Ms Marijke Beltman.

UCD School of Agriculture & Food Science - Research Publications 2011/12

Below is the list of research publications for the UCD School of Agriculture & Food Science in the academic year 2011/12.


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Books
Professor Mike Gibney
Mike Gibney (2012) Something to chew on ~ Challenging controversies in food and health. Dublin: UCD Press.  
Dr Helen Sheridan
Feehan, J., Sheridan, H. and Egan, D. (2012) The Grasses of Ireland. Carlow: Teagasc.  

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Book Chapters
Dr John Fry
Whelan, Jackie; John Fry and Stuart Green (2012) 'Standardizing terminology for Landscape Categorization: An agri-environmental perspective' In: Marie Mianowski (eds). Irish Contemporary Landscapes in Literature and the Arts. Hampshire/New York: Palgrave Macmillan.  
Dr Barry John McMahon
Purvis, G., Downey, L., Beever, D., Doherty, M. L., Monahan, F. J., Sheridan, H. & McMahon, B.J.; (2012) 'Development of a Sustainably-Competitive Agriculture' In: Lichtfouse, E (eds). Sustainable Agriculture Reviews. Berlin: Springer. Available Online  
Professor Frank Monahan
Purvis, G., Downey, L., Beever, D., Doherty, M. L., Monahan, F. J., Sheridan, H. & McMahon, B.J.; (2012) 'Development of a Sustainably-Competitive Agriculture' In: Lichtfouse, E (eds). Sustainable Agriculture Reviews. Berlin: Springer. Available Online  
Dr Aifric O'Sullivan
O'Sullivan A, Avizonis D, German JB, Slupsky CM. (2012) 'Software Tools for NMR Metabolomics' In: Encyclopedia of Magnetic Resonance. Online: John Wiley & Sons, Ltd.  
Dr Gordon Purvis
Purvis, G., Downey, L., Beever, D., Doherty, M. L., Monahan, F. J., Sheridan, H. & McMahon, B.J.; (2012) 'Development of a Sustainably-Competitive Agriculture' In: Lichtfouse, E (eds). Sustainable Agriculture Reviews. Berlin: Springer. Available Online  
Dr Helen Sheridan
Purvis, G., Downey, L., Beever, D., Doherty, M. L., Monahan, F. J., Sheridan, H. & McMahon, B.J.; (2012) 'Development of a Sustainably-Competitive Agriculture' In: Lichtfouse, E (eds). Sustainable Agriculture Reviews. Berlin: Springer. Available Online  

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Peer Reviewed Journals
Dr Tommy Boland
Ryan, W., Hennessy, D., Boland, T.M., and Shalloo L., (2012) 'The effect of grazing season length on nitrogen utilization efficiency and nitrogen balance in spring calving dairy production systems'. Journal of Agricultural Science .  
Purcell, P.J., Boland, T.M., OBrien, M., OKiely, P. (2012) 'In vitro rumen methane output of forb species sampled in spring and summer'. Journal of Agricultural and Food Science .  
Ryan, W., Hennessy, D., Boland, T.M., and Shalloo, L., (2012) 'The effect of grazing season length on nitrogen utilisation efficiency and nitrogen balance in spring calving dairy production systems'. Journal of Agricultural Science .  
Purcell, P.J., OBrien, M., Navarro-Villa, A., Boland, T.M., McEvoy, M., Grogan, D. and OKiely, P. (2012) 'In vitro rumen methane output of perennial ryegrass varieties and perennial grass species harvested throughout the growing season'. Grass and Forage Science .  
Wims C.M., McEvoy M., Delaby L., Boland T.M. and ODonovan M. (2012) 'Effect of perennial ryegrass (Lolium perenne L.) cultivars on the milk production performance of grazing dairy cows'. Animal .  
Lillis, L., Boots, B., Kenny, D.A., Petrie, K., Boland, T.M., Clipson, N. and Doyle, E.M. (2011) 'The effect of dietary concentrate and soya oil inclusion on microbial diversity in the rumen of cattle'. Journal of Applied Microbiology, 111 (6):1426-1435. Available Online  
Dr Lorraine Brennan
Osorio, M.T., Moloney, A.P., Brennan, L. and Monahan, F.J.; (2012) 'Authentication of beef production systems using a metabolomics based approach'. Animal, 6 :167-172. Available Online  
Morris C, O'Grada C, Ryan M, Roche HM, Gibney MJ, Gibney ER, Brennan L. (2012) 'The relationship between BMI and metabolomic profiles: a focus on amino acids'. Proceedings of the Nutrition Society, :1-11.  
Claesson MJ, Jeffery IB, Conde S, Power SE, O'Connor EM, Cusack S, Harris HM, Coakley M, Lakshminarayanan B, O'Sullivan O, Fitzgerald GF, Deane J, O'Connor M, Harnedy N, O'Connor K, O'Mahony D, van Sinderen D, Wallace M, Brennan L, Stanton C, Marchesi JR, Fitzgerald AP, Shanahan F, Hill C, Ross RP, O'Toole PW (2012) 'Gut microbiota composition correlates with diet and health in the elderly'. Nature, 488 (7410):178-184.  
Wallace M, Cottell E, Gibney MJ, McAuliffe FM, Wingfield M, Brennan L (2012) 'An investigation into the relationship between the metabolic profile of follicular fluid, oocyte developmental potential, and implantation outcome'. Fertility and sterility, 97 (5):1078-101.  
Ni Raghallaigh S, Bender K, Lacey N, Brennan L, Powell FC (2012) 'The fatty acid profile of the skin surface lipid layer in papulopustular rosacea'. The British journal of dermatology, 166 (2):279-287.  
Dr John Browne
Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC (2012) 'Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau'. Genomics, 44 (16):799-810.  
Morine MJ, Toomey S, McGillicuddy FC, Reynolds CM, Power KA, Browne JA, Loscher C, Mills KH, Roche HM (2012) 'Network analysis of adipose tissue gene expression highlights altered metabolic and regulatory transcriptomic activity in high-fat-diet-fed IL-1RI knockout mice'. The Journal of nutrition .  
Walsh SW, Mehta JP, McGettigan PA, Browne JA, Forde N, Alibrahim RM, Mulligan FJ, Loftus B, Crowe MA, Matthews D, Diskin M, Mihm M, Evans AC (2012) 'Effect of the metabolic environment at key stages of follicle development in cattle: focus on steroid biosynthesis'. Genomics, 44 (9):504-517.  
Machugh DE, Taraktsoglou M, Killick KE, Nalpas NC, Browne JA, Park SD, Hokamp K, Gormley E, Magee DA (2012) 'Pan-genomic analysis of bovine monocyte-derived macrophage gene expression in response to in vitro infection with Mycobacterium avium subspecies paratuberculosis'. Veterinary Research, 43 (1).  
McGivney BA, Browne JA, Fonseca RG, Katz LM, Machugh DE, Whiston R, Hill EW (2012) 'MSTN genotypes in Thoroughbred horses influence skeletal muscle gene expression and racetrack performance'. Gene .  
Sheridan MP, Browne JA, MacHugh DE, Costello E, Gormley E (2012) 'Impact of delayed processing of bovine peripheral blood on differential gene expression'. VET IMMUNOL IMMUNOP, 145 (1-2):199-205.  
Magee DA, Taraktsoglou M, Killick KE, Nalpas NC, Browne JA, Park SD, Conlon KM, Lynn DJ, Hokamp K, Gordon SV, Gormley E, MacHugh DE (2012) 'Global gene expression and systems biology analysis of bovine monocyte-derived macrophages in response to in vitro challenge with Mycobacterium bovis'. PLoS ONE, 7 (2).  
Killick KE, Browne JA, Park SD, Magee DA, Martin I, Meade KG, Gordon SV, Gormley E, O'Farrelly C, Hokamp K, MacHugh DE (2011) 'Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes'. BMC Genomics, 12 .  
Dr Nigel Patrick Brunton
Tiwari U, Cummins E*, Brunton N and Gallagher E; (2012) 'A Modelling Approach to Estimate the Level and Molecular Weight Distribution of β-Glucan During the Baking of an Oat-Based Bread'. Food and Bioprocess Technology, 5 (5):1990-2002.  
Rawson, Ashish, Tiwari, Brijesh K., Tuohy, Maria, Brunton, Nigel (2012) 'Impact of frozen storage on polyacetylene content, texture and colour in carrots disks'. Journal of Food Engineering .  
Rawson, Ashish, Brunton, Nigel, Tuohy, Maria (2012) 'High pressuretemperature degradation kinetics of polyacetylenes in carrots'. Food Chemistry .  
Keenan, Derek F., Tiwari, Brijesh K., Patras, Ankit, Gormley, Ronan, Butler, Francis, Brunton, Nigel P. (2012) 'Effect of sonication on the bioactive, quality and rheological characteristics of fruit smoothies'. International Journal of Food Science and Technology .  
Keenan, Derek F., R, Christian, Gormley, Ronan, Butler, Francis, Brunton, Nigel P. (2012) 'Effect of high hydrostatic pressure and thermal processing on the nutritional quality and enzyme activity of fruit smoothies'. LWT -- Food Science and Technology .  
Keenan, Derek F., Brunton, Nigel P., Mitchell, Michelle, Gormley, Ronan, Butler, Francis (2012) 'Flavour profiling of fresh and processed fruit smoothies by instrumental and sensory analysis'. Food Research International .  
Keenan, Derek F., Brunton, Nigel P., Gormley, Ronan, Butler, Francis (2012) 'FUNDAMENTAL RHEOLOGY AND QUALITY CHARACTERISTICS OF SOUS-VIDE PROCESSED APPLE PUREES CONTAINING APPLE OR BLACKCURRANT POMACE INCLUSIONS'. Journal of Food Processing and Preservation .  
Wijngaard, Hilde, Hossain, Mohammad B., Rai, Dilip K. Brunton, Nigel (2012) 'Techniques to extract bioactive compounds from food by-products of plant origin'. Food Research International .  
Rawson A., Tiwari B., Tuohy M.G., O'Donnell C.P. and Brunton, N. (2011) 'Effect of ultrasound and blanching pretreatments on polyacetylene and carotenoid content of hot air and freeze dried carrot discs'. Ultrasonics Sonochemistry, 18 (5):1172-1179.  
Rawson, A.,Tiwari, B. K.,Tuohy, M. G.,O'Donnell, C. P.,Brunton, N.; (2011) 'Effect of ultrasound and blanching pretreatments on polyacetylene and carotenoid content of hot air and freeze dried carrot discs'. Ultrasonics Sonochemistry, 18 (55):1172-1179. Available Online  
Dr Owen Doyle
Barry, J., Doyle, O. Grant, G. and Grogan, H. (2012) 'Supplementation of Spent mushroom Substrate (SMS) to Improve the Structure and Productivity as a Casing Material'. Science and Cultivation of Edible Fungi, XVIII :735-741.  
Forrest, M., Doyle., O. and Hunter A.; (2011) 'Auditing of Assessment in the Horticultural Degree Programme University College Dublin'. Acta Horticulturae, 920 :89-94.  
Professor Alexander Evans
Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC (2012) 'Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau'. Genomics, 44 (16):799-810.  
Evans AC, Mossa F, Walsh SW, Scheetz D, Jimenez-Krassel F, Ireland JL, Smith GW, Ireland JJ (2012) 'Effects of maternal environment during gestation on ovarian folliculogenesis and consequences for fertility in bovine offspring'. Reproduction in domestic animals = Zuchthygiene, 47 Suppl 4 :31-37.  
Hutchinson IA, Hennessy AA, Waters SM, Dewhurst RJ, Evans AC, Lonergan P, Butler ST (2012) 'Effect of supplementation with different fat sources on the mechanisms involved in reproductive performance in lactating dairy cattle'. Theriogenology, 78 (1):12-27.  
Cummins SB, Lonergan P, Evans AC, Butler ST (2012) 'Genetic merit for fertility traits in Holstein cows: II. Ovarian follicular and corpus luteum dynamics, reproductive hormones, and estrus behavior'. Journal of Dairy Science, 95 (7):3698-3710.  
Cummins SB, Waters SM, Evans AC, Lonergan P, Butler ST (2012) 'Genetic merit for fertility traits in Holstein cows: III. Hepatic expression of somatotropic axis genes during pregnancy and lactation'. Journal of Dairy Science, 95 (7):3711-3721.  
Walsh SW, Matthews D, Browne JA, Forde N, Crowe MA, Mihm M, Diskin M, Evans AC (2012) 'Acute dietary restriction in heifers alters expression of genes regulating exposure and response to gonadotrophins and IGF in dominant follicles'. Animal Reproduction Science, 133 (1-2):43-51.  
Mossa F, Walsh SW, Butler ST, Berry DP, Carter F, Lonergan P, Smith GW, Ireland JJ, Evans AC (2012) 'Low numbers of ovarian follicles ?3 mm in diameter are associated with low fertility in dairy cows'. Journal of Dairy Science, 95 (5):2355-2361.  
Parr MH, Mullen MP, Crowe MA, Roche JF, Lonergan P, Evans AC, Diskin MG (2012) 'Relationship between pregnancy per artificial insemination and early luteal concentrations of progesterone and establishment of repeatability estimates for these traits in Holstein-Friesian heifers'. Journal of Dairy Science, 95 (5):2390-2396.  
Hutchinson IA, Hennessy AA, Dewhurst RJ, Evans AC, Lonergan P, Butler ST (2012) 'The effect of strategic supplementation with trans-10,cis-12 conjugated linoleic acid on the milk production, estrous cycle characteristics, and reproductive performance of lactating dairy cattle'. Journal of Dairy Science, 95 (5):2442-2451.  
Mullen MP, Elia G, Hilliard M, Parr MH, Diskin MG, Evans AC, Crowe MA (2012) 'Proteomic characterization of histotroph during the preimplantation phase of the estrous cycle in cattle'. Journal of Proteome Research, 11 (5):3004-3018.  
Walsh SW, Mehta JP, McGettigan PA, Browne JA, Forde N, Alibrahim RM, Mulligan FJ, Loftus B, Crowe MA, Matthews D, Diskin M, Mihm M, Evans AC (2012) 'Effect of the metabolic environment at key stages of follicle development in cattle: focus on steroid biosynthesis'. Genomics, 44 (9):504-517.  
Richardson L, Hanrahan JP, Donovan A, Martí JI, Fair S, Evans AC, Lonergan P (2012) 'Effect of site of deposition on the fertility of sheep inseminated with frozen-thawed semen'. Animal Reproduction Science, 131 (3-4):160-164.  
Cummins SB, Lonergan P, Evans AC, Berry DP, Evans RD, Butler ST (2012) 'Genetic merit for fertility traits in Holstein cows: I. Production characteristics and reproductive efficiency in a pasture-based system'. Journal of Dairy Science, 95 (3):1310-1322.  
Chapwanya A, Meade KG, Foley C, Narciandi F, Evans AC, Doherty ML, Callanan JJ, O'Farrelly C (2012) 'The postpartum endometrial inflammatory response: a normal physiological event with potential implications for bovine fertility'. Reproduction, fertility, and development .  
Mullen MP, Forde N, Parr MH, Diskin MG, Morris DG, Nally JE, Evans AC, Crowe MA (2012) 'Alterations in systemic concentrations of progesterone during the early luteal phase affect RBP4 expression in the bovine uterus'. Reproduction, fertility, and development, 24 (5):715-722.  
Pluta, K., Irwin, J.A., Dolphin, C., Richardson, L., Fitzpatrick, E., Gallagher, M.E., Reid, C.J, Crowe, M.A., Roche, J.F., Lonergan, P., Carrington, S.D., Evans, A,C, (2011) 'Glycoproteins and glycosidases of the cervix during the periestrous period in cattle'. Journal of Animal Science, 89 (12):4032-4042.  
Richardson L, Hanrahan JP, O'Hara L, Donovan A, Fair S, O'Sullivan M, Carrington SD, Lonergan P, Evans AC; (2011) 'Ewe breed differences in fertility after cervical AI with frozen-thawed semen and associated differences in sperm penetration and physicochemical properties of cervical mucus'. Animal Reproduction Science, 129 (1-2):37-43.  
Swangchan-Uthai T, Walsh SW, Alexander SL, Cheng Z, Crowe MA, Evans AC, Wathes DC; (2011) 'Comparison of mRNA for IGFs and their binding proteins in the oviduct during the peri-oestrous period between dairy heifers and lactating cows'. Reproduction (Cambridge, England), 142 (3):457-465.  
Dr Alan Fahey
Meredith B.K.,Kearney J.F., Finlay, E.K., Bradley D.G.,Fahey A.G., Berry, D.P., and Lynn D.J. (2012) 'Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland'. BMC Genetics, 13 (21). Available Online  
McHugh N., Evans R.D., Fahey A.G., and Berry, D.P. (2012) 'Animal muscularity and size are genetically correlated with animal live-weight and price'. Livestock Science, 144 (1-2):11-19.  
M. A. Bower, B. A. McGivney, M. G. Campana, J. Gu, L. S. Andersson, E. Barrett, C. R. Davis, S. Mikko, F. Stock, V. Voronkova, D. G. Bradley, A. G. Fahey, G. Lindgren, D. E. MacHugh, G. Sulimova and E. W. Hill; (2012) 'The genetic origin and history of speed in the Thoroughbred racehorse'. Nature Communications, 3 . Available Online  
Dr Trudee Fair
Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC (2012) 'Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau'. Genomics, 44 (16):799-810.  
Fair T, Lonergan P (2012) 'The role of progesterone in oocyte acquisition of developmental competence'. Reproduction in Domestic Animals, 47 Suppl 4 :142-147.  
Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC. (2012) 'Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau'. Physiolgical Genomics, 44 (16):799-810.  
O'Shea LC, Mehta J, Lonergan P, Hensey C, Fair T. (2012) 'Developmental competence in oocytes and cumulus cells: candidate genes and networks'. Reproductive Biomedicine Online .  
Matoba S, O'Hara L, Carter F, Kelly AK, Fair T, Rizos D, Lonergan P (2012) 'The association between metabolic parameters and oocyte quality early and late postpartum in Holstein dairy cows'. Journal of Dairy Science, 95 (3):1257-1266.  
Garcia-Herreros M, Aparicio IM, Rath D, Fair T, Lonergan P (2012) 'Differential glycolytic and glycogenogenic transduction pathways in male and female bovine embryos produced in vitro'. Reproduction, fertility, and development, 24 (2):344-352.  
O'Doherty AM, O'Shea LC, Fair T.; (2011) 'Bovine DNA Methylation Imprints Are Established in an Oocyte Size-Specific Manner, Which Are Coordinated with the Expression of the DNMT3 Family Proteins'. Biology of Reproduction .  
Leal C, Mamo S, Fair T, Lonergan P; (2011) 'Gene Expression in Bovine Oocytes and Cumulus Cells After Meiotic Inhibition with the Cyclin-Dependent Kinase Inhibitor Butyrolactone I'. Reproduction in Domestic Animals .  
Dr Niamh Forde
Eozenou C, Carvalho AV, Forde N, Giraud-Delville C, Gall L, Lonergan P, Auguste A, Charpigny G, Richard C, Pannetier M, Sandra O (2012) 'FOXL2 is regulated during the bovine estrous cycle and its expression in the endometrium is independent of conceptus-derived interferon tau'. Biology of reproduction, 87 (2).  
Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC (2012) 'Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau'. Genomics, 44 (16):799-810.  
Mamo S, Mehta JP, Forde N, McGettigan P, Lonergan P (2012) 'Conceptus-endometrium crosstalk during maternal recognition of pregnancy in cattle'. Biology of reproduction, 87 (1):1-9.  
Walsh SW, Matthews D, Browne JA, Forde N, Crowe MA, Mihm M, Diskin M, Evans AC (2012) 'Acute dietary restriction in heifers alters expression of genes regulating exposure and response to gonadotrophins and IGF in dominant follicles'. Animal Reproduction Science, 133 (1-2):43-51.  
O'Hara L, Scully S, Maillo V, Kelly AK, Duffy P, Carter F, Forde N, Rizos D, Lonergan P (2012) 'Effect of follicular aspiration just before ovulation on corpus luteum characteristics, circulating progesterone concentrations and uterine receptivity in single-ovulating and superstimulated heifers'. Reproduction, 143 (5):673-682.  
Walsh SW, Mehta JP, McGettigan PA, Browne JA, Forde N, Alibrahim RM, Mulligan FJ, Loftus B, Crowe MA, Matthews D, Diskin M, Mihm M, Evans AC (2012) 'Effect of the metabolic environment at key stages of follicle development in cattle: focus on steroid biosynthesis'. Genomics, 44 (9):504-517.  
Rizos D, Scully S, Kelly AK, Ealy AD, Moros R, Duffy P, Al Naib A, Forde N, Lonergan P (2012) 'Effects of human chorionic gonadotrophin administration on day 5 after oestrus on corpus luteum characteristics, circulating progesterone and conceptus elongation in cattle'. Reproduction, fertility, and development, 24 (3):472-481.  
Forde N, Lonergan P (2012) 'Transcriptomic analysis of the bovine endometrium: What is required to establish uterine receptivity to implantation in cattle?'. The Journal of reproduction and development, 58 (2):189-195.  
Mullen MP, Forde N, Parr MH, Diskin MG, Morris DG, Nally JE, Evans AC, Crowe MA (2012) 'Alterations in systemic concentrations of progesterone during the early luteal phase affect RBP4 expression in the bovine uterus'. Reproduction, fertility, and development, 24 (5):715-722.  
Dr Mary Forrest
Forrest, M., Doyle., O. and Hunter A.; (2011) 'Auditing of Assessment in the Horticultural Degree Programme University College Dublin'. Acta Horticulturae, 920 :89-94.  
Dr Eileen Gibney
Morris C, O'Grada C, Ryan M, Roche HM, Gibney MJ, Gibney ER, Brennan L. (2012) 'The relationship between BMI and metabolomic profiles: a focus on amino acids'. Proceedings of the Nutrition Society, :1-11.  
Professor Mike Gibney
Cashman KD, Muldowney S, McNulty B, Nugent A, Fitzgerald AP, Kiely M, Walton J, Gibney MJ, Flynn A. (2012) 'Vitamin D status of Irish adults: findings from the National Adult Nutrition Survey'. British Journal of Nutrition, :1-9.  
Morris C, O'Grada C, Ryan M, Roche HM, Gibney MJ, Gibney ER, Brennan L. (2012) 'The relationship between BMI and metabolomic profiles: a focus on amino acids'. Proceedings of the Nutrition Society, :1-11.  
Devlin UM, McNulty BA, Nugent AP, Gibney MJ. (2012) 'The use of cluster analysis to derive dietary patterns: methodological considerations, reproducibility, validity and the effect of energy mis-reporting'. Proceedings of the Nutrition Society, :1-11.  
Tierney AC, McMonagle J, Shaw DI, Gulseth HL, Helal O, Saris WH, Paniagua JA, Go??bek-Leszczy? I, Defoort C, Williams CM, Karsltr, Vessby B, Dembinska-Kiec A, L?-Miranda J, Blaak EE, Drevon CA, Gibney MJ, Lovegrove JA, Roche HM (2011) 'Effects of dietary fat modification on insulin sensitivity and on other risk factors of the metabolic syndrome--LIPGENE: a European randomized dietary intervention study'. International Journal of Obesity, 35 (6):800-809.  
Dr Margherita Gioria
Saunders, M, Tobin, B, Black, K, Gioria, M, Nieuwenhuis, M, Osborne, B.; (2012) 'Thinning effects on the net ecosystem carbon exchange of a Sitka spruce forest are temperature-dependent'. Agricultural and Forest Meteorology .  
Dr Olga Grant
Grant, OM; Davies, MJ; James, CM; Johnson, AW; Leinonen, I; Simpson, DW (2012) 'Thermal imaging and carbon isotope composition indicate variation amongst strawberry (Fragaria x ananassa) cultivars in stomatal conductance and water use efficiency'. Environmental and Experimental Botany, 76 :7-15.  
Grant, OM; Davies MJ; Johnson AW, Simpson DW (2012) 'Physiological and growth responses to water deficits in cultivated strawberry Fragaria x ananassa and in one of its progenitors, Fragaria chiloensis'. Environmental and Experimental Botany, 83 :23-32.  
Dr Emmeline Hill
Hill EW, Fonseca RG, McGivney BA, Gu J, MacHugh DE, Katz LM. ; (2012) 'MSTN genotype (g.66493737C/T) association with speed indices in Thoroughbred racehorses'. Journal of Applied Physiology, 112 (null):86-90. Available Online  
Eivers, S.S., McGivney, B.A., Gu J., MacHugh, D.E., Katz, L.M., Hill, E.W.; (2011) 'PGC-1α encoded by the PPARGC1A gene regulates oxidative energy metabolism in equine skeletal muscle during exercise'. Animal Genetics . Available Online  
Dr Alan Hunter
Buckley, M., Gaffney, M. and Hunter, A. (2012) 'Nutrient Release rate of Compost on a USGA Specification Golf Green'. Acta Horticulturae .  
Beyene, G.T., Kehoe, E., MasSiurtain, M. and Hunter, A. (2012) 'Effect of different substrates on rooting and flower development of primary and tertiary runners of strawberry tray plants cv. Elsanta'. Acta Horticulturae .  
G. McMahon and A.Hunter (2012) 'Determination of the effects of plant growth regulators on Agrostis stolonifera and Poa annua'. Acta Horticulturae .  
G. McMahon and A.Hunter (2012) 'Turf quality and growth suppression of Agrostis stolonifera PennA4 with plant growth regulators and various fertiliser rates'. Acta Horticulturae .  
Gallone, A., Hunter, A. and Douglas, G.C. (2012) 'Radiosensitivity of Hebe Oratia Beauty and Wiri Mist irradiated in vitro with -rays from 60Co'. Scientia Horticulturae, (138):36-42.  
Lekwadi, S.O., Nemesova, A., Lynch, T., Phillips, H., Hunter, A. and MacSiurtain, M. (2012) 'Site classification and growth models for Sitka spruce plantations in Ireland'. Forest Ecology and Management, (283):56-65.  
Beyene, G.T., Kehoe, E. MacSiurtain, M. and Hunter, A. (2012) 'Effect of Different Transplanting Dates and Runner Types on Qaulity and Yield of 'Elsanta' Strawberry'. Acta Horticulturae, (926):483-489.  
Dr Jean-Christophe Jacquier
Alexa, R.I., Mounsey, J.S., O'Kennedy, B.T., Jacquier, J.-C.; (2011) 'Oxidative stability of water/oil mixtures as influenced by the addition of free Cu2+ or Cu-alginate gel beads'. Food Chemistry, 129 (2):253-258.  
Dr Alan Kelly
Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC (2012) 'Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau'. Genomics, 44 (16):799-810.  
Maillo V, Rizos D, Besenfelder U, Havlicek V, Kelly AK, Garrett M, Lonergan P (2012) 'Influence of lactation on metabolic characteristics and embryo development in postpartum Holstein dairy cows'. Journal of Dairy Science, 95 (7):3865-3876.  
O'Hara L, Scully S, Maillo V, Kelly AK, Duffy P, Carter F, Forde N, Rizos D, Lonergan P (2012) 'Effect of follicular aspiration just before ovulation on corpus luteum characteristics, circulating progesterone concentrations and uterine receptivity in single-ovulating and superstimulated heifers'. Reproduction, 143 (5):673-682.  
Matoba S, O'Hara L, Carter F, Kelly AK, Fair T, Rizos D, Lonergan P (2012) 'The association between metabolic parameters and oocyte quality early and late postpartum in Holstein dairy cows'. Journal of Dairy Science, 95 (3):1257-1266.  
Rizos D, Scully S, Kelly AK, Ealy AD, Moros R, Duffy P, Al Naib A, Forde N, Lonergan P (2012) 'Effects of human chorionic gonadotrophin administration on day 5 after oestrus on corpus luteum characteristics, circulating progesterone and conceptus elongation in cattle'. Reproduction, fertility, and development, 24 (3):472-481.  
Al Naib A, Ward F, Kelly AK, Wade M, Marti JI, Lonergan P; (2011) 'Effect of duration of storage at ambient temperature on fertilizing ability and mucus penetration ability of fresh bovine sperm'. Theriogenology, 76 (6):1070-1075.  
Professor Patrick Lonergan
Forde N, Duffy GB, McGettigan PA, Browne JA, Mehta JP, Kelly AK, Mansouri-Attia N, Sandra O, Loftus BJ, Crowe MA, Fair T, Roche JF, Lonergan P, Evans AC (2012) 'Evidence for an early endometrial response to pregnancy in cattle: both dependent upon and independent of interferon tau'. Genomics, 44 (16):799-810.  
Gath VP, Crowe MA, O'Callaghan D, Boland MP, Duffy P, Lonergan P, Mulligan FJ (2012) 'Effects of diet type on establishment of pregnancy and embryo development in beef heifers'. Animal Reproduction Science, 133 (3-4):139-145.  
Fair T, Lonergan P (2012) 'The role of progesterone in oocyte acquisition of developmental competence'. Reproduction in Domestic Animals, 47 Suppl 4 :142-147.  
Eozenou C, Carvalho AV, Forde N, Giraud-Delville C, Gall L, Lonergan P, Auguste A, Charpigny G, Richard C, Pannetier M, Sandra O (2012) 'FOXL2 is regulated during the bovine estrous cycle and its expression in the endometrium is independent of conceptus-derived interferon tau'. Biology of reproduction, 87 (2).  
Hutchinson IA, Hennessy AA, Waters SM, Dewhurst RJ, Evans AC, Lonergan P, Butler ST (2012) 'Effect of supplementation with different fat sources on the mechanisms involved in reproductive performance in lactating dairy cattle'. Theriogenology, 78 (1):12-27.  
Cummins SB, Lonergan P, Evans AC, Butler ST (2012) 'Genetic merit for fertility traits in Holstein cows: II. Ovarian follicular and corpus luteum dynamics, reproductive hormones, and estrus behavior'. Journal of Dairy Science, 95 (7):3698-3710.  
Cummins SB, Waters SM, Evans AC, Lonergan P, Butler ST (2012) 'Genetic merit for fertility traits in Holstein cows: III. Hepatic expression of somatotropic axis genes during pregnancy and lactation'. Journal of Dairy Science, 95 (7):3711-3721.  
Maillo V, Rizos D, Besenfelder U, Havlicek V, Kelly AK, Garrett M, Lonergan P (2012) 'Influence of lactation on metabolic characteristics and embryo development in postpartum Holstein dairy cows'. Journal of Dairy Science, 95 (7):3865-3876.  
Mamo S, Mehta JP, Forde N, McGettigan P, Lonergan P (2012) 'Conceptus-endometrium crosstalk during maternal recognition of pregnancy in cattle'. Biology of reproduction, 87 (1):1-9.  
O'Hara L, Scully S, Maillo V, Kelly AK, Duffy P, Carter F, Forde N, Rizos D, Lonergan P (2012) 'Effect of follicular aspiration just before ovulation on corpus luteum characteristics, circulating progesterone concentrations and uterine receptivity in single-ovulating and superstimulated heifers'. Reproduction, 143 (5):673-682.  
Mossa F, Walsh SW, Butler ST, Berry DP, Carter F, Lonergan P, Smith GW, Ireland JJ, Evans AC (2012) 'Low numbers of ovarian follicles ?3 mm in diameter are associated with low fertility in dairy cows'. Journal of Dairy Science, 95 (5):2355-2361.  
Parr MH, Mullen MP, Crowe MA, Roche JF, Lonergan P, Evans AC, Diskin MG (2012) 'Relationship between pregnancy per artificial insemination and early luteal concentrations of progesterone and establishment of repeatability estimates for these traits in Holstein-Friesian heifers'. Journal of Dairy Science, 95 (5):2390-2396.  
Hutchinson IA, Hennessy AA, Dewhurst RJ, Evans AC, Lonergan P, Butler ST (2012) 'The effect of strategic supplementation with trans-10,cis-12 conjugated linoleic acid on the milk production, estrous cycle characteristics, and reproductive performance of lactating dairy cattle'. Journal of Dairy Science, 95 (5):2442-2451.  
O'Shea LC, Mehta J, Lonergan P, Hensey C, Fair T (2012) 'Developmental competence in oocytes and cumulus cells: candidate genes and networks'. Biology of reproduction, 58 (2):88-101.  
Richardson L, Hanrahan JP, Donovan A, Martí JI, Fair S, Evans AC, Lonergan P (2012) 'Effect of site of deposition on the fertility of sheep inseminated with frozen-thawed semen'. Animal Reproduction Science, 131 (3-4):160-164.  
Matoba S, O'Hara L, Carter F, Kelly AK, Fair T, Rizos D, Lonergan P (2012) 'The association between metabolic parameters and oocyte quality early and late postpartum in Holstein dairy cows'. Journal of Dairy Science, 95 (3):1257-1266.  
Cummins SB, Lonergan P, Evans AC, Berry DP, Evans RD, Butler ST (2012) 'Genetic merit for fertility traits in Holstein cows: I. Production characteristics and reproductive efficiency in a pasture-based system'. Journal of Dairy Science, 95 (3):1310-1322.  
Rizos D, Scully S, Kelly AK, Ealy AD, Moros R, Duffy P, Al Naib A, Forde N, Lonergan P (2012) 'Effects of human chorionic gonadotrophin administration on day 5 after oestrus on corpus luteum characteristics, circulating progesterone and conceptus elongation in cattle'. Reproduction, fertility, and development, 24 (3):472-481.  
Forde N, Lonergan P (2012) 'Transcriptomic analysis of the bovine endometrium: What is required to establish uterine receptivity to implantation in cattle?'. The Journal of reproduction and development, 58 (2):189-195.  
Garcia-Herreros M, Aparicio IM, Rath D, Fair T, Lonergan P (2012) 'Differential glycolytic and glycogenogenic transduction pathways in male and female bovine embryos produced in vitro'. Reproduction, fertility, and development, 24 (2):344-352.  
Lonergan P; (2011) 'Influence of progesterone on oocyte quality and embryo development in cows'. Theriogenology, 76 (9):1594-1601.  
Pluta, K., Irwin, J.A., Dolphin, C., Richardson, L., Fitzpatrick, E., Gallagher, M.E., Reid, C.J, Crowe, M.A., Roche, J.F., Lonergan, P., Carrington, S.D., Evans, A,C, (2011) 'Glycoproteins and glycosidases of the cervix during the periestrous period in cattle'. Journal of Animal Science, 89 (12):4032-4042.  
Richardson L, Hanrahan JP, O'Hara L, Donovan A, Fair S, O'Sullivan M, Carrington SD, Lonergan P, Evans AC; (2011) 'Ewe breed differences in fertility after cervical AI with frozen-thawed semen and associated differences in sperm penetration and physicochemical properties of cervical mucus'. Animal Reproduction Science, 129 (1-2):37-43.  
Al Naib A, Ward F, Kelly AK, Wade M, Marti JI, Lonergan P; (2011) 'Effect of duration of storage at ambient temperature on fertilizing ability and mucus penetration ability of fresh bovine sperm'. Theriogenology, 76 (6):1070-1075.  
Leal C, Mamo S, Fair T, Lonergan P; (2011) 'Gene Expression in Bovine Oocytes and Cumulus Cells After Meiotic Inhibition with the Cyclin-Dependent Kinase Inhibitor Butyrolactone I'. Reproduction in Domestic Animals .  
Dr Bridget Lynch
O'Connor, P.J., Hennessy, D., Brophy, C., O'Donovan, M. and Lynch, M.B. (2012) 'The effect of the nitrification inhibitor dicyandiamide (DCD) on herbage production when applied at differenct times and rates in the autumn and winter'. Agriculture, Ecosystems and Environment, 152 :79-89.  
Dr James Lyng
Caminiti, I.M., Noci, F., Muñoz, A., Whyte, P., Morgan, D.J., Cronin, D.A., Lyng, J.G.; (2012) 'Impact of selected combinations of non-thermal processing technologies on the quality of an apple and cranberry juice blend'. Food Chemistry, 124 (4):1387-1392. Available Online  
Caminiti, Irene M.; Noci, Francesco; Morgan, Desmond J.; Cronin, Denis A.; Lyng, James G. (2012) 'The effect of pulsed electric fields, ultraviolet light or high intensity light pulses in combination with manothermosonication on selected physico-chemical and sensory attributes of an orange and carrot juice blend'. Food and Bioproducts Processing, 90 :442-448.  
Munoz, A.; Palgan, I.; Noci, F.; Cronin, D. A.; Morgan, D. J.; Whyte, P.; Lyng, J. G. (2012) 'Combinations of selected non-thermal technologies and antimicrobials for microbial inactivation in a buffer system'. Food Research International, 47 (1):100-105.  
Palgan, I.; Munoz, A.; Noci, F.; Whyte, P.; Morgan, D. J.; Cronin, D. A.; Lyng, J. G. (2012) 'Effectiveness of combined Pulsed Electric Field (PEF) and Manothermosonication (MTS) for the control of Listeria innocua in a smoothie type beverage'. Food Control, 25 (2):621-625.  
Haughton, P. N.; Lyng, J. G.; Cronin, D. A.; Morgan, D. J.; Fanning, S.; Whyte, P. (2012) 'Efficacy of pulsed electric fields for the inactivation of indicator microorganisms and foodborne pathogens in liquids and raw chicken'. Food Control, 25 (1):131-135.  
Haughton, P.N., Lyng, J.G., Morgan, D.J., Cronin, D.A., Noci, F., Fanning, S., Whyte, P. ; (2012) 'An evaluation of the potential of high intensity ultrasound for improving the microbial safety of poultry'. Food and Bioprocess Technology, 5 (3):992-998.  
Caminiti, Irene M.; Palgan, Izabela; Munoz, Arantxa; Noci, Francesco; Whyte, Paul; Morgan, Desmond J.; Cronin, Denis A.; Lyng, James G. (2012) 'The Effect of Ultraviolet Light on Microbial Inactivation and Quality Attributes of Apple Juice'. Food and Bioprocess Technology, 5 (2):680-686.  
Zell, Markus; Lyng, James G.; Morgan, Desmond J.; Cronin, Denis A. (2012) 'Quality Evaluation of an Ohmically Cooked Ham Product'. Food and Bioprocess Technology, 5 (1):265-272.  
Munoz, A.,Caminiti, I. M.,Palgan, I.,Pataro, G.,Noci, F.,Morgan, D. J.,Cronin, D. A.,Whyte, P.,Ferrari, G.,Lyng, J. G.; (2012) 'Effects on Escherichia coli inactivation and quality attributes in apple juice treated by combinations of pulsed light and thermosonication'. Food Research International, 45 (1):299-305. Available Online  
Haughton, P.N., Lyng, J., Cronin, C., Fanning, S., Whyte, P. (2012) 'Effect of crust freezing applied alone and in combination with ultraviolet light on the survival of Campylobacter on raw chicken'. Food Microbiology, 32 :147-151.  
Arimi, J., Duggan, E., Lyng, J. A., ORiordan, E.D., OSullivan, M; (2012) 'Crispiness of a microwave-expanded imitation cheese: Mechanical, acoustic and sensory evaluation'. Journal of Food Engineering, 108 :403-409.  
Palgan, I.,Caminiti, I. M.,Munoz, A.,Noci, F.,Whyte, P.,Morgan, D. J.,Cronin, D. A.,Lyng, J. G.; (2011) 'Combined effect of selected non-thermal technologies on Escherichia coli and Pichia fermentans inactivation in an apple and cranberry juice blend and on product shelf life'. International Journal of Food Microbiology, 151 (11):1-61. Available Online  

Dr M?tMac Sirt?
Lekwadi, S.O., Nemesova, A., Lynch, T., Phillips, H., Hunter, A., Mac Sirt?, M. (2012) 'Site classification and growth models for Sitka spruce plantations in Ireland'. Forest Ecology and Management, 283 :56-65. Available Online  
Professor David MacHugh
Magee, David A., Taraktsoglou, Maria, Killick, Kate E., Nalpas, Nicolas C., Browne, John A., Park, Stephen D. E., Conlon, Kevin M., Lynn, David J., Hokamp, Karsten, Gordon, Stephen V., Gormley, Eamonn, MacHugh, David E. (2012) 'Global gene expression and systems biology analysis of bovine monocyte-derived macrophages in response to in vitro challenge with Mycobacterium bovis'. PLoS ONE, 7 (2). Available Online  
Eivers, S. S., McGivney, B. A., Gu, J., MacHugh, D. E., Katz, L. M., Hill, E. W. (2012) 'PGC-1 alpha encoded by the PPARGC1A gene regulates oxidative energy metabolism in equine skeletal muscle during exercise'. Animal Genetics, 43 (2):153-162. Available Online  
MacHugh, David E., Taraktsoglou, Maria, Killick, Kate E., Nalpas, Nicolas C., Browne, John A., Park, Stephen D. E., Hokamp, Karsten, Gormley, Eamonn, Magee, David A. (2012) 'Pan-genomic analysis of bovine monocyte-derived macrophage gene expression in response to in vitro infection with Mycobacterium avium subspecies paratuberculosis'. Veterinary Research, 43 . Available Online  
Magee, David A., Taraktsoglou, Maria, Killick, Kate E., Nalpas, Nicolas C., Browne, John A., Park, Stephen D. E., Conlon, Kevin M., Lynn, David J., Hokamp, Karsten, Gordon, Stephen V., Gormley, Eamonn, MacHugh, David E. (2012) 'Global Gene Expression and Systems Biology Analysis of Bovine Monocyte-Derived Macrophages in Response to In Vitro Challenge with Mycobacterium bovis'. PLoS ONE, 7 (2). Available Online  
Berkowicz, E. W., Magee, D. A., Berry, D. P., Sikora, K. M., Howard, D. J., Mullen, M. P., Evans, R. D., Spillane, C., MacHugh, D. E. (2012) 'Single nucleotide polymorphisms in the imprinted bovine insulin-like growth factor 2 receptor gene (IGF2R) are associated with body size traits in Irish Holstein-Friesian cattle'. Animal Genetics, 43 (1):81-87. Available Online  
Kijas, James W., Lenstra, Johannes A., Hayes, Ben, Boitard, Simon, Porto Neto, Laercio R., San Cristobal, Magali, Servin, Bertrand, McCulloch, Russell, Whan, Vicki, Gietzen, Kimberly, Paiva, Samuel, Barendse, William, Ciani, Elena, Raadsma, Herman, McEwan, John, Dalrymple, Brian, International Sheep Genomics Consortium, Members (2012) 'Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection'. PLoS Biology, 10 (2). Available Online  
Meade, Kieran G., O'Gorman, Grace M., Narciandi, Fernando, MacHugh, David E., O'Farrelly, Cliona (2012) 'Functional characterisation of bovine interleukin 8 promoter haplotypes in vitro'. Molecular Immunology, 50 (1-2):108-116. Available Online  
Bower, Mim A., McGivney, Beatrice A., Campana, Michael G., Gu, Jingjing, Andersson, Lisa S., Barrett, Elizabeth, Davis, Catherine R., Mikko, Sofia, Stock, Frauke, Voronkova, Valery, Bradley, Daniel G., Fahey, Alan G., Lindgren, Gabriella, MacHugh, David E., Sulimova, Galina, Hill, Emmeline W. (2012) 'The genetic origin and history of speed in the Thoroughbred racehorse'. Nature Communications, 3 . Available Online  
Hill, Emmeline W., Fonseca, Rita G., McGivney, Beatrice A., Gu, Jingjing, MacHugh, David E., Katz, Lisa M. (2012) 'MSTN genotype (g.66493737C/T) association with speed indices in Thoroughbred racehorses'. Journal of Applied Physiology, 112 (1):86-90. Available Online  
Mullen, Michael P., Creevey, Christopher J., Berry, Donagh P., McCabe, Matt S., Magee, David A., Howard, Dawn J., Killeen, Aideen P., Park, Stephen D., McGettigan, Paul A., Lucy, Matt C., MacHugh, David E., Waters, Sinead M. (2012) 'Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples'. BMC Genomics, 13 . Available Online  
Sheridan, Michael P., Browne, John A., MacHugh, David E., Costello, Eamon, Gormley, Eamonn (2012) 'Impact of delayed processing of bovine peripheral blood on differential gene expression'. Veterinary Immunology and Immunopathology, 145 (1-2):199-205. Available Online  
Killick, Kate E., Browne, John A., Park, Stephen D. E., Magee, David A., Martin, Irene, Meade, Kieran G., Gordon, Stephen V., Gormley, Eamonn, O'Farrelly, Cliona, Hokamp, Karsten, MacHugh, David E. (2011) 'Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes'. BMC Genomics, 12 . Available Online  
Dr David Magee
Mullen, M. P., Creevey, C. J., Berry, D. P., McCabe, M. S., Magee, D. A., Howard, D. J., Killeen, A. P., Park, S. D., McGettigan, P. A., Lucy, M. C., Machugh, D. E., Waters, S. M. (2012) 'Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples'. BMC Genomics, 13 . Available Online  
Machugh DE, Taraktsoglou M, Killick KE, Nalpas NC, Browne JA, Park SD, Hokamp K, Gormley E, Magee DA (2012) 'Pan-genomic analysis of bovine monocyte-derived macrophage gene expression in response to in vitro infection with Mycobacterium avium subspecies paratuberculosis'. Veterinary Research, 43 (1).  
Berkowicz EW, Magee DA, Berry DP, Sikora KM, Howard DJ, Mullen MP, Evans RD, Spillane C, MacHugh DE (2012) 'Single nucleotide polymorphisms in the imprinted bovine insulin-like growth factor 2 receptor gene (IGF2R) are associated with body size traits in Irish Holstein-Friesian cattle'. Animal Genetics, 43 (1):81-87.  
Magee DA, Taraktsoglou M, Killick KE, Nalpas NC, Browne JA, Park SD, Conlon KM, Lynn DJ, Hokamp K, Gordon SV, Gormley E, MacHugh DE (2012) 'Global gene expression and systems biology analysis of bovine monocyte-derived macrophages in response to in vitro challenge with Mycobacterium bovis'. PLoS ONE, 7 (2).  
Killick KE, Browne JA, Park SD, Magee DA, Martin I, Meade KG, Gordon SV, Gormley E, O'Farrelly C, Hokamp K, MacHugh DE (2011) 'Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes'. BMC Genomics, 12 .  
Dr Barry John McMahon
McMahon, B.J., Copland, Kirwan, L. Purvis, G. & Whelan, J. (2012) 'Survey evaluation for species richness of farmland birds'. Irish Birds .  
McMahon, B.J., Anderson, A., Carnus, T., Helden, A.J., Kelly-Quinn, M., Maki, A., Sheridan, H., and Purvis, G. (2012) 'Different bioindicators measured at different spatial scales vary in their response to agricultural intensity'. Ecological Indicators, 18:676-683 . Available Online  
McMahon, B.J., Johansson, M.P., Piertney, S.B, Buckley, K. & Hnd, J. ; (2012) 'Genetic variation among endangered Irish red grouse (Lagopus lagopus hibernicus) populations: implications for conservation and management'. Conservation Genetics, 13 :639-647.  
Johansson, M.P., McMahon, B.J., Hnd, J. & Segelbacher, G.; (2012) 'Amplification success of multilocus genotypes from feathers found in the field compared with feathers obtained from shot birds'. Ibis, (154):15-20.  
Sheridan, H., McMahon, B.J., Carnus, T., Finn, J.A., Helden, A.J., Kinsella, A. & Purvis, G. ; (2011) 'Pastoral farmland habitat diversity in south-east Ireland'. Agriculture, Ecosystems and Environment, 144 :130-135.  
Professor Frank Monahan
Osorio, M.T., Moloney, A.P., Brennan, L. and Monahan, F.J.; (2012) 'Authentication of beef production systems using a metabolomics based approach'. Animal, 6 :167-172. Available Online  
Zazzo, A., Bendrey, R., Vella, D., Moloney, A.P., Monahan, F.J., Schmidt, O. (2012) 'A refined sampling strategy for intra-tooth stable isotope analysis of mammalian enamel'. Geochimica Et Cosmochimica Acta, 84 :1-13. Available Online  
Moloney, A.P., Kennedy, C., Noci, F., Monahan, F.J., Kerry, J.P. (2012) 'Lipid and colour stability of m. longissimus muscle from lambs fed camelina or linseed as oil or seeds'. Meat Science, 92 :1-7. Available Online  
Monahan, F.J., Moloney, A.P., Osorio, M.T., Re, F.T., Schmidt, O. and Brennan, L. (2012) 'Authentication of grass-fed beef using bovine muscle, hair or urine'. Trends in Food Science & Technology . Available Online  
Contini, C., Katsikogianni, M.G., O'Neill, F.T., O'Sullivan, M., Dowling, D.P., Monahan, F.J.; (2012) 'PET trays coated with Citrus extract exhibit antioxidant activity with cooked turkey meat'. LWT -- Food Science and Technology, 47 :471-477. Available Online  
Zazzo, A., Monahan, F.J., Moloney, A.P., Green, S. and Schmidt, O. ; (2011) 'Sulphur isotopes in animal hair track distance to sea'. Rapid Communications in Mass Spectrometry, 25 (17):2371-2378. Available Online  
Dr Aine Ni Dhubhain
Upton,V., Nhubh?,A., Bullock, C (2012) 'Preferences and values for afforestation: The effects of location and respondent understanding on forest attributes in a labelled choice experiment'. Forest Policy and Economics, 23 :17-27.  
Farrelly, N., NiDhubhain, A. and Nieuwenhuis, M. ; (2011) 'The productivity of Sitka spruce in relation to site quality measures: relationships and predictions at two geographic scales in Ireland'. Forest Ecology and Management, 262 (12):2199-2206.  
Professor Maarten Nieuwenhuis
McInerney,D., Barrett, F., Rosengren, M., Jonsson, C., Harper, C. and Nieuwenhuis, M. (2012) 'Multi-temporal Forest Cover Mapping and Change Detection in Ireland using Medium Resolution Satellite Imagery'. International Journal of Applied Remote Sensing .  
Tobin, B. and Nieuwenhuis, M. (2012) 'Forest carbon research in Ireland: the importance of long-term monitoring of forest growth and climate'. Earthzine . Available Online  
Saunders, M., Tobin, B., Black, K., Niewuenhuis, M. and Osborne, B. (2012) 'Thinning effects on the net ecosystem carbon exchange of a Sitka spruce forest are temperature-dependent'. Agricultural and Forest Meteorology, 157:1-10 . Available Online  
Samuel Olajuyigbe, Brian Tobin, Maarten Nieuwenhuis (2012) 'The measurement of woody root decomposition using two methodologies in a Sitka spruce forest ecosystem'. Plant and Soil, 360 (1&2):77-91.  
Samuel Olajuyigbe, Brian Tobin, Matthew Saunders, Maarten Nieuwenhuis; (2012) 'Forest thinning and soil respiration in a Sitka spruce forest in Ireland'. Agricultural and Forest Meteorology, 157 :86-95.  
McInerney, D., Suarez-Minguez, J. and Nieuwenhuis, M.; (2011) 'Extending Forest Inventories and Monitoring Programmes Using Remote Sensing: A Review'. Irish Forestry, 68 (1&2):6-22.  
Niall Farrelly, ine Nhubh?, and Maarten Nieuwenhuis; (2011) 'Modelling and mapping the potential productivity of Sitka spruce from site factors in Ireland'. Irish Forestry, 68 (1&2):23-40.  
Farrelly, N., NiDhubhain, A. and Nieuwenhuis, M. ; (2011) 'The productivity of Sitka spruce in relation to site quality measures: relationships and predictions at two geographic scales in Ireland'. Forest Ecology and Management, 262 (12):2199-2206.  
O Olajuyigbe, S., Tobin, B., Gardiner, P. and Nieuwenhuis, M. ; (2011) 'Stocks and decay dynamics of above- and belowground coarse woody debris in managed Sitka spruce forests in Ireland'. Forest Ecology and Management, 262 (6):1109-1118.  
Dr Francesco Noci
Munoz, A.,Caminiti, I. M.,Palgan, I.,Pataro, G.,Noci, F.,Morgan, D. J.,Cronin, D. A.,Whyte, P.,Ferrari, G.,Lyng, J. G.; (2012) 'Effects on Escherichia coli inactivation and quality attributes in apple juice treated by combinations of pulsed light and thermosonication'. Food Research International, 45 (1):299-305. Available Online  
Palgan, I.,Caminiti, I. M.,Munoz, A.,Noci, F.,Whyte, P.,Morgan, D. J.,Cronin, D. A.,Lyng, J. G.; (2011) 'Combined effect of selected non-thermal technologies on Escherichia coli and Pichia fermentans inactivation in an apple and cranberry juice blend and on product shelf life'. International Journal of Food Microbiology, 151 (11):1-61. Available Online  
Dr Anne Nugent
Danika M. Martyn*, Breige A. McNulty, Anne P. Nugent, Michael J. Gibney (2012) 'Food additives and pre-school children'. Proceedings of the Nutrition Society .  
Cashman KD, Muldowney S, McNulty B, Nugent A, Fitzgerald AP, Kiely M, Walton J, Gibney MJ, Flynn A. (2012) 'Vitamin D status of Irish adults: findings from the National Adult Nutrition Survey'. British Journal of Nutrition .  
Devlin NFC, Mc Nulty BN, Gibney MJ, Thielecke F, Smith H, Nugent AP (2012) 'Whole grain intakes in the diets of Irish children and teenagers'. British Journal of Nutrition .  
Leite JC, Hearty AP, Nugent AP, Gibney MJ (2011) 'A method for assessing dietary intakes of n-3 long-chain polyunsaturated fatty acids and trans fatty acids in an Irish adult population'. International Journal of Food Science and Nutrition .  
Dr Deirdre O'Connor
Dowler, E.A and O Connor,D. ; (2011) 'Rights Based Approaches to Addressing Food Poverty and Food Insecurity in Ireland and the UK'. Social Science and Medicine . Available Online  
Mr Alan O'Doherty
O'Doherty AM, O'Shea LC, Fair T.; (2011) 'Bovine DNA Methylation Imprints Are Established in an Oocyte Size-Specific Manner, Which Are Coordinated with the Expression of the DNMT3 Family Proteins'. Biology of Reproduction .  
Professor John O'Doherty
Bojlul Bahar, John V. ODoherty and Torres Sweeney (2012) 'Chitooligosaccharide elicits acute inflammatory cytokine response through AP-1 pathway in human intestinal epithelial-like (Caco-2) cells'. Molecular immunology, 51 :283-291.  
O'Shea, C.J., Sweeney, T., Bahar, B., Ryan, M.T. and J.V. ODoherty (2012) 'Singular consumption of either Lactobacillus plantarum or inulin reduces manure odour from finishing pigs, however this is negated when offered in combination'. Journal of Animal Science .  
Moroney, NC and O'Grady, MN and O'Doherty, JV and Kerry, JP (2012) 'Addition of seaweed Laminaria digitata extracts containing laminarin and fucoidan to porcine diets: Influence on the quality and shelf-life of fresh pork'. Meat Science .  
Walsh, AM and Sweeney, T. and Bahar, B. and Flynn, B. and O'Doherty, JV (2012) 'The effects of supplementing varying molecular weights of chitooligosaccharide on performance, selected microbial populations and nutrient digestibility in the weaned pig'. animal, 1 (1):1-9.  
Leonard, SG and Sweeney, T. and Bahar, B. and O?Doherty, JV (2012) 'Effect of maternal seaweed extract supplementation on suckling piglet growth, humoral immunity, selected microflora, and immune response after an ex vivo lipopolysaccharide challenge'. Journal of Animal Science, 90 (2):505-514.  
T. Sweeney, C. Collins, P. Reilly, K.P. Pierce and J.V. ODoherty (2012) 'Effect of purified β-glucans derived from Laminaria digitata, Laminaria hyperborea and Saccharomyces cerevisiae on piglet performance, selected bacterial populations, volatile fatty acids and pro-inflammatory cytokines in the gastrointestinal tract of pigs'. British Journal of Nutrition .  
A. M. Walsh, T. Sweeney, B. Bahar, B. Flynn and J. V. O'Doherty (2012) 'The effect of chitooligosaccharide supplementation on intestinal morphology, selected microbial populations, volatile fatty acidconcentrations and immune gene expression in the weaned pig'. Animal .  
S. G. Leonard, T. Sweeney, B. Bahar and J. V. ODoherty (2012) 'Effect of maternal seaweed extract supplementation on suckling piglet growth, humoral immunity, selected microflora, and immune response after an ex vivo lipopolysaccharide challenge'. Journal of Animal Science, 90 (2):505-514.  
Alam T, Bahar B, Waters SM, McGee M, O'Doherty JV, Sweeney T; (2012) 'Functional characterisation of the bovine neuropeptide Y gene promoter and evaluation of the transcriptional activities of promoter haplotypes'. Molecular biology reports, PMID:21562764 .  
Alam T, Bahar B, Waters SM, McGee M, O'Doherty JV, Sweeney T. (2012) 'Functional characterisation of the bovine Neuropeptide Y gene promoter and evaluation of the transcriptional activities of promoter haplotypes'. Molecular biology reports, 39 (2):919-928.  
Sweeney T, Dillon S, Fanning J, Egan J, Figat S, Gutierrez JJM, Mannion C, Leonard F and ODoherty JV; (2011) 'The effects of seaweed extracts and organic acids on digestive fermentation and selective micro biota in newly weaned pigs experimentally challenged with Salmonella Typhimurium'. Animal Feed Science and Technology, 165 :85-94.  
Pauly C, Spring P, Gahan D and ODoherty JV ; (2011) 'The effect of cereal type and enzyme supplementation on carcass characteristics, volatile fatty acids and intestinal microflora and boar taint in entire male pigs'. Animal, 5 (3):378-386.  
S. G. Leonard, T. Sweeney, B. Bahar, B. P. Lynch and J. V. ODoherty ; (2011) 'Effects of dietary seaweed extract supplementation in sows and post-weaned pigs on performance, intestinal morphology, intestinal microflora and immune status'. British Journal of Nutrition, 106 (5):688-699.  
Sweeney, T. and Dillon, S. and Fanning, J. and Egan, J. and O'Shea, CJ and Figat, S. and Gutierrez, JJM and Mannion, C. and Leonard, F. and O'Doherty, JV (2011) 'Evaluation of seaweed-derived polysaccharides on indices of gastrointestinal fermentation and selected populations of microbiota in newly weaned pigs challenged with< i> Salmonella Typhimurium'. Animal Feed Science and Technology, 165 (1):85-94.  
S. G. Leonard, T. Sweeney, B. Bahar and J. V. ODoherty; (2011) 'Effect of maternal seaweed extract supplementation on suckling piglet growth, humoral immunity, selected microflora, and immune response after an ex vivo lipopolysaccharide challenge'. Journal of Animal Science .  
Dr Conor O'Reilly
Hogg, B.V., Kacprzyk, K., Molony, E.M., O'Reilly, C. Gallagher, T.F. Gallois, P., and McCabe, P.F. (2011) 'An in vivo root hair assay for determining rates of apoptotic-like programmed cell death in plants'. Plant Methods, 7 (45):1746-4811.  
Professor Dolores O'Riordan
Halpin RM, Brady DB, O'Riordan ED, O'Riordan, D.; (2011) 'Determination of the effect of dairy powderson adherence of Streptococus sobrinus and Streptococcus salivarius to hyroxylapetite and the growth of these bacteria'. Journal of Functional Foods, 3 (4):280-289.  
Dr Sharon O'Rourke
O'Rourke, S.M. and N.H. Holden; (2012) 'Determination of soil organic matter and carbon fractions in forest topsoils using VIS-NIR hyperspectral imaging'. Soil Science Society of America Journal, 76 (2):586-596.  
Dr Aifric O'Sullivan
Zivkovic A, Yang J, Georgi K, Hegedus C, Nording M, O'Sullivan A, German JB, Hogg R, Weiss R, Bay C, Hammock, B. (2012) 'Serum oxylipin profiles in IgA nephropathy patients reflect kidney functional alterations'. Metabolomics, 8 (6).  
Mr Mick O'Sullivan
Contini, C., Katsikogianni, M.G., O'Neill, F.T., O'Sullivan, M., Dowling, D.P., Monahan, F.J.; (2012) 'PET trays coated with Citrus extract exhibit antioxidant activity with cooked turkey meat'. LWT -- Food Science and Technology, 47 :471-477. Available Online  
Arimi, J., Duggan, E., Lyng, J. A., ORiordan, E.D., OSullivan, M; (2012) 'Crispiness of a microwave-expanded imitation cheese: Mechanical, acoustic and sensory evaluation'. Journal of Food Engineering, 108 :403-409.  
Richardson L, Hanrahan JP, O'Hara L, Donovan A, Fair S, O'Sullivan M, Carrington SD, Lonergan P, Evans AC; (2011) 'Ewe breed differences in fertility after cervical AI with frozen-thawed semen and associated differences in sperm penetration and physicochemical properties of cervical mucus'. Animal Reproduction Science, 129 (1-2):37-43.  
Dr Karina Pierce
Whelan, S. J.,F.J. Mulligan, J.J Callan, B. Flynn, and K.M. Pierce (2012) 'Effect of forage source and a supplementary methionine hydroxyl analogue on rumen fermentation parameters in lactating dairy cows offered a low crude protein diet'. Animal Feed Science and Technology .  
Whelan, S. J., K. M. Pierce, B. Flynn, and F. J. Mulligan (2012) 'Effect of supplemental concentrate type on milk production and metabolic status in early-lactation dairy cows grazing perennial ryegrass-based pasture'. Journal of Dairy Science .  
Archbold H, Shalloo L, Kennedy, E, Pierce KM and Buckley F (2012) 'Influence of age, body weight and body condition score before mating start date on the pubertal rate of maiden HolsteinFriesian heifers and implications for subsequent cow performance and profitability'. Animal .  
McCarthy B, Pierce KM, Delaby L, Brennan A and Horan B (2012) 'The effect of stocking rate and calving date on milk production and dry matter intake of Holstein-Friesian dairy cows'. Journal of Dairy Science .  
R. Prendiville, L. Shalloo, K.M. Pierce and F. Buckley (2012) 'Comparative performance and economic appraisal of Holstein-Friesian, Jersey and Jersey?olstein-Friesian cows under seasonal pasture-based management'. Irish Journal of Agricultural and Food Research .  
T. Sweeney, C. B. Collins, P. Reilly, K. M. Pierce, M. Ryan and J. V. ODoherty (2012) 'Effect of purified b-glucans derived from Laminaria digitata, Laminaria hyperborea and Saccharomyces cerevisiae on piglet performance, selected bacterial populations, volatile fatty acids and pro-inflammatory cytokines in the gastrointestinal tract of pigs'. British Journal of Nutrition .  
Whelan, S. J., K. M. Pierce, B. Flynn, and F. J. Mulligan (2012) 'Effect of supplementary concentrate type on nitrogen partitioning in early lactation dairy cows offered perennial ryegrass-based pasture'. Journal of Dairy Science, 95 :4468-4477.  
Dr Gordon Purvis
Sheridan, H., McMahon, B.J., Carnus, T., Finn, J.A., Helden, A.J., Kinsella, A. & Purvis, G. ; (2011) 'Pastoral farmland habitat diversity in south-east Ireland'. Agriculture, Ecosystems and Environment, 144 :130-135.  
Dr Matthew Saunders
Saunders, M., Kansiime, F., Jones, M; (2012) 'Agricultural encroachment: implications for carbon sequestration in tropical African wetlands'. Global Change Biology .  
Olajuyigbe, S., Tobin, B., Saunders, M., Nieuwenhuis, M (2012) 'Forest thinning and soil respiration in a Sitka spruce forest in Ireland'. Agricultural and Forest Meteorology, 157 :86-95.  
Saunders, M, Tobin, B, Black, K, Gioria, M, Nieuwenhuis, M, Osborne, B.; (2012) 'Thinning effects on the net ecosystem carbon exchange of a Sitka spruce forest are temperature-dependent'. Agricultural and Forest Meteorology .  
Dr Olaf Schmidt
Augustenborg CA, Hepp S, Kammann C, Hagan D, Schmidt O and Mller C; (2012) 'Biochar and earthworm effects on soil nitrous oxide and carbon dioxide emissions'. Journal of Environmental Quality, 41 (4):1203-1209. Available Online  
Zazzo A, Bendrey R, Vella D, Moloney AP, Monahan FJ, Schmidt O; (2012) 'A refined sampling strategy for intra-tooth stable isotope analysis of mammalian enamel'. Geochimica Et Cosmochimica Acta, 84 :1-13. Available Online  
Keith, A.M., Boots, B., Hazard, C., Niechoj, R., Arroyo, J., Bending, G.D., Bolger, T., Breen, J., Clipson, N., Doohan, F.M., Griffin, C.T. and Schmidt, O. (2012) 'Cross-taxa congruence, indicators and environmental drivers in soils under agricultural and extensive land management'. European Journal of Soil Biology, 49:55-62 . Available Online  
Stromberger ME, Keith AM, Schmidt O; (2012) 'Distinct microbial and faunal communities and translocated carbon in Lumbricus terrestris drilospheres'. Soil Biology and Biochemistry, 46 :155-162. Available Online  
Boots, B., Keith, A.M., Niechoj, R., Breen, J., Schmidt, O. and Clipson, N. (2012) 'Unique soil microbial assemblages associated with grassland ant species with different nesting and foraging strategies'. Pedobiologia, 55 (1):33-40. Available Online  
Schmidt O, Dautel H, Newton J, Gray JS; (2011) 'Natural isotope signatures of host blood are replicated in moulted ticks'. Ticks and Tick-borne Diseases, 2 (4):225-227. Available Online  
Artuso N, Kennedy TF, Connery J, Grant J and Schmidt O; (2011) 'Assessment of biosolids in earthworm choice tests with different species and soils'. Global NEST Journal, 13 (3):255-265. Available Online  
Zazzo, A., Monahan, F. J., Moloney, A. P., Green, S, Schmidt, O.; (2011) 'Sulphur isotopes in animal hair track distance to sea'. Rapid Communications in Mass Spectrometry, 25 (17):2371-2378. Available Online  
Dr Helen Sheridan
McMahon, B.J., Anderson, A., Carnus, T., Helden, A.J., Kelly-Quinn, M., Maki, A., Sheridan, H., and Purvis, G. (2012) 'Different bioindicators measured at different spatial scales vary in their response to agricultural intensity'. Ecological Indicators, 18:676-683 . Available Online  
Sheridan, H., McMahon, B.J., Carnus, T., Finn, J.A., Helden, A.J., Kinsella, A. & Purvis, G. ; (2011) 'Pastoral farmland habitat diversity in south-east Ireland'. Agriculture, Ecosystems and Environment, 144 :130-135.  
Dr Brian Tobin
Saunders, M., Tobin, B., Black, K., Niewuenhuis, M. and Osborne, B. (2012) 'Thinning effects on the net ecosystem carbon exchange of a Sitka spruce forest are temperature-dependent'. Agricultural and Forest Meteorology, 157:1-10 . Available Online  
O Olajuyigbe, S., Tobin, B., Gardiner, P. and Nieuwenhuis, M. ; (2011) 'Stocks and decay dynamics of above- and belowground coarse woody debris in managed Sitka spruce forests in Ireland'. Forest Ecology and Management, 262 (6):1109-1118.  

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Other Journals
Professor Maarten Nieuwenhuis
Nieuwenhuis, M. (2012) 'Forestry Training & Education Ireland (FTEI) - Development of a Funded Forestry Training Programme' Forestry and Energy Review, 2 (1):46-47.  
Harper, C. and Nieuwenhuis, M. (2012) 'INTEGRAL - Future-oriented integrated management of European forest landscapes' Irish Timber and Forestry, 21 (1):18-19.  
M. Nieuwenhuis; (2011) 'Training and Education Needs in the Forestry sector' Forestry & Energy Review, 1 (2):38-39.  
M. Nieuwenhuis and M. Doyle; (2011) 'UCD Forestry' Forestry & Energy Review, 1 (2):40-42.  

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Conference Publications
Dr James Breen
Breen, J. P., Donnellan T. and Westhoff, P. (2012) Reducing Greenhouse Gas Emissions from Irish agriculture: A market-based approach 28th Triennial Conference of the International Association of Agricultural Economists,  
Dr Nigel Patrick Brunton
Rawson A., Tiwari U., Brunton N., Valverde J., Tuohy M., Cummins E.; (2011) A methodology to predict the pre-harvest and post-harvest level of polyacetylenes in carrots 7th International Conference on Predictive Modelling of Food Quality and Safety, Radisson Blu Royal Hotel, Golden Lane, Dublin, Ireland, 406  
Dr Thomas Cummins
Cummins, Thomas, Louise Doherty and Sharon O'Rourke; (2011) Map of the Soils of Urban Dublin 5th Annual Irish Earth Observation Symposium : Realising the potential of Earth Observation for the national benefit, Johnstown Castle, Wexford,  
Cummins, Thomas, Louise Doherty and Sharon O'Rourke; (2011) Map of the Soils of Urban Dublin 5th Annual Irish Earth Observation Symposium : Realising the potential of Earth Observation for the national benefit, Johnstown Castle, Wexford,  
Doherty, Louise, Mamadou Diallo, Mel Dermody, Agnieszka Piwowarczyk, Sharon O'Rourke and Thomas Cummins; (2011) Soils of Urban Dublin: First Approximation 5th Annual Irish Earth Observation Symposium : Realising the potential of Earth Observation for the national benefit, Johnstown Castle, Wexford,  
Dr Alan Fahey
Brady K.M., Corbally, A., Harty D., and Fahey A.G. (2012) The relationship between genetic diversity and phenotypic characteristics in the Irish Draught horse EAAP European Federation of Animal Science,  
Fitzsimons, C., Kenny, D., Deighton, M., Fahey, A., and McGee M. (2012) Methane Emissions and rumen fermentation in heifers differing in phenotypic residual feed intake EAAP European Federation of Animal Science,  
A.M. Doyle, R.D. Evans, and A.G. Fahey (2012) Analysis of twin births, calf stillbirths, abortion, and calf death before 28 days of age in Irish Charolais and Limousin populations American Society of Animal Science,  
P.S. Agostini, A.G. Fahey, E.G. Manzanilla, J.V. O'Doherty, C. de Blas, and J. Casa (2012) Managment and facility factors that affect mortality in grow-finishing pigs American Society of Animal Science,  
P.S. Agostini, A.G. Fahey, E.G. Manzanilla, J.V. O'Doherty, C. de Blas, and J. Casa (2012) Housing and management factors that affect feed conversion ratio in grow-finishing pigs American Society of Animal Science,  
P.S. Agostini, A.G. Fahey, E.G. Manzanilla, J.V. O'Doherty, C. de Blas, and J. Casa (2012) Management and facility factors that affect the variation of average daily gain in grow-finishing pigs American Society of Animal Science,  
C.R. Davis, E.W. Hill, and A.G. Fahey (2012) Influence of genomic predictors on yearling sales price and total career earnings in Thoroughbred racehorses American Society of Animal Science,  
Dr John Fry
Gonz?z, Ainhoa; John Fry, Tamara Hochstrasser, Peter Carvill, Berna Grist and Paul Scott (2012) Irish Guidance for Biodiversity Impact Assessment IAIA12, 'Energy Future: The role of Impact Assessment' - the 31st Annual meeting of the International Association for Impact Assessment, Porto, Portugal, 27 May - 1 June, 2012,  
Dr Jean-Christophe Jacquier
G. O'Neill, J.C. Jacquier, M. O'Sullivan, E.D. O'Riordan; (2011) Encapsulation of amino acids and peptides in cold set whey protein microspheres 2011 EFFoST Annual Meeting, Berlin,  
J. Newman, N. Harbourne, D. ORiordan, J.C. Jacquier, M. O'Sullivan; (2011) Evaluation of bitterness in whey protein hydrolysates by an electronic tongue and trained sensory panel 2011 EFFoST Annual Meeting, Berlin,  
E. Duggan, N. Harbourne, J.C. Jacquier, M. O'Sullivan, D. O'Riordan; (2011) Incorporation of whey protein hydrolysates into acidified milk gels 2011 EFFoST Annual Meeting, Berlin,  
J.-C. Jacquier, N. Harbourne, E. Marete, D. ORiordan; (2011) Predictive model for bioactive stability during non-isothermal heat treatment and storage in beverages: Case study of acidified feverfew beverages 7th International Conference on Predictive Modelling of Food Quality and Safety ICPMF7, Available Online  
Dr Barbara Murphy
Fonseca RG, Kenny DA, McGivney BA, Murphy BA, Hill EW, Katz LM; (2011) The response of plasma myeloperoxidase concentrations to exercise and training in a group of Thoroughbred flat racehorses over a two-year period of time French Equine Veterinary Association (AVEF),  
O.F. McGlynn, C.M.Blake, J.A. Browne, B.A. Murphy; (2011) TEMPORAL DIFFERENCES IN CYTOKINE AND CLOCK GENE RESPONSES TO IMMUNE STIMULATION IN EQUINE BLOOD NEUROSCIENCE IRELAND MEETING 2011,  
Dr Aine Ni Dhubhain
Farrelly, N, Ni Dhubhain, A and Nieuwenhuis, M; (2011) Site, soil and climatic factors and the productivity of Sitka spruce in Ireland . In: Farrelly, N eds. The role of site classification in forest productivity and management, Athenry, Co. Galway, 64 - 82  
Professor Maarten Nieuwenhuis
McCaffery, F and Nieuwenhuis, M; (2012) TREEMODEL: Single tree volume models and tools to measure upper-stem diameters Forest growth assessment and modellingin Ireland - state of the art, Dublin, Available Online  
McCullagh, A. and Nieuwenhuis, M. (2012) STANDMODEL: Dynamic yield models for Japanese larch, mixtures and broadleaves Forest growth assessment and modellingin Ireland - state of the art, Dublin, Available Online  
Farrelly, N, Ni Dhubhain, A and Nieuwenhuis, M; (2011) Site, soil and climatic factors and the productivity of Sitka spruce in Ireland . In: Farrelly, N eds. The role of site classification in forest productivity and management, Athenry, Co. Galway, 64 - 82  
Dr Anne Nugent
Nugent AP (2012) Dietary whole grain intakes: a global perspective Whole Grain Summit,  
Professor Dolores O'Riordan
E. Duggan, N. Harbourne, J.C. Jacquier, M. O'Sullivan, D. O'Riordan (2011) ; (2011) Incorporation of whey protein hydrolysates into acidified milk gels 2011 EFFoST Annual Meeting Berlin, , 09-NOV-11 - 11-NOV-11,  
J. Newman, N. Harbourne, D. ORiordan, J.C. Jacquier, M. O'Sullivan (2011); (2011) Evaluation of bitterness in whey protein hydrolysates by an electronic tongue and trained sensory panel 2011 EFFoST Annual Meeting Berlin, , 09-NOV-11 - 11-NOV-11,  
.-C. Jacquier, N. Harbourne, E. Marete, D. ORiordan (2011); (2011) Predictive model for bioactive stability during non-isothermal heat treatment and storage in beverages: Case study of acidified feverfew beverages 7th International Conference on Predictive Modelling of Food Quality and Safety ICPMF7 , 12-SEP-11 - 15-SEP-11,  
Mr Mick O'Sullivan
G. O'Neill, J.C. Jacquier, M. O'Sullivan, E.D. O'Riordan ; (2011) Encapsulation of amino acids and peptides in cold set whey protein microspheres 2011 EFFoST Annual Meeting Berlin,  
J. Newman, N. Harbourne, D. ORiordan, J.C. Jacquier, M. O'Sullivan ; (2011) Evaluation of bitterness in whey protein hydrolysates by an electronic tongue and trained sensory panel 2011 EFFoST Annual Meeting Berlin,  
E. Duggan, N. Harbourne, J.C. Jacquier, M. O'Sullivan, D. O'Riordan; (2011) Incorporation of whey protein hydrolysates into acidified milk gels 2011 EFFoST Annual Meeting Berlin,  
Dr Matthew Saunders
Nicolau, M. , Saunders, M., O'Neill, M., Brabazon, A. and Osborne, B. ; (2012) Evolving Interpolating Models of Net Ecosystem CO2 Exchange Using Grammatical Evolution 15th European Conference on Genetic Programming (EuroGP 2012), Malaga, Spain, 134 - 145  

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Published Reports
Dr John Fry
Gonz?z, A, T Hochstrasser, J Fry, P Scott, P Carvill, M Jones and B Grist (2012) Integrated Biodiversity Impact Assessment: Best Practice Guidance Manual. Environmental Protection Agency, Wexford, Ireland. Available Online  
Dr Deirdre O'Connor
O'Connor, D. Lai, M. and Watson, S. ; (2011) Overview of Social Farming and Rural Developoment Policy in Selected EU Member States. European Commission, Brussels. Available Online  

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Other Publications
Dr Alan Hunter
Gallone, A., Hunter, A. and Douglas, G.C. 2011. (2011) Micropropagation , polyploidy induction and y-irradiation of Hebe cultivars. Abstract.  
Dr Anne Nugent
O'Mahony L, Stepien M, Gibney MJ, Nugent AP, Brennan L. (2011) The potential role of vitamin D enhanced foods in improving vitamin D status. Articles.  
Professor John O'Doherty
O'sullivan, J.T. and O'doherty, J. and Sweeney, T. and others (2012) THE IMPROVEMENT OF GASTROINTESTINAL HEALTH, IMMUNITY AND PERFORMANCE BY DIETARY INTERVENTION. .  
Dr Conor O'Reilly
Schmal, J.L. and OReilly, C. (2012) Use of exponential nitrogen loading in the nursery to promote nutrient uptake and quality of pedunculate oak seedlings. Articles. Available Online  
Dr David Stead
Stead, D. R.; (2011) Review of A Living Countryside? The Politics of Sustainable Development in Rural Ireland. Rural History, 22: 273-4: Book Reviews.  

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