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'When the forest begins'. Image by Mr Phillip Glombik.

'When the forest begins'. Image by Mr Phillip Glombik.

UCD School of Agriculture & Food Science - Research Publications 2014/15

Below is the list of research publications for the UCD School of Agriculture & Food Science in the academic year 2014/15.


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Books
Dr James Kinsella
J. Kinsella, D. O'Connor, B. Smyth, R. Nelson, P. Henry, A. Walsh and H. Doherty (2014) Social Farming Handbook: Guidelines for considering, planning, delivering and using social farming services in Ireland and Northern Ireland. Dublin: School of Agriculture & Food Science, UCD. Available Online  
Jim Kinsella, D. O'Connor, B. Smyth and R. Nelson (2014) Costs and Benefits of Social Farming: Report of the Social Farming Across Borders Project. Ireland: School of Agriculture & Food Science, UCD. Available Online  

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Book Chapters
Dr Nigel Patrick Brunton
Koidis, Anastasios, Rawson, Ashish, Brunton, Nigel, Preedy, Victor (2015) 'Chapter 6 - Effect of Different Types of Processing and Storage on the Polyacetylene Profile of Carrots and Parsnips' In: Processing and Impact on Active Components in Food. Academic Press. , pp.45-53 Available Online  
Dr Thomas Cummins
Byrne, Kenneth A; Aherne, Julian; Cummins, Thomas (2015) 'Current and Future Degradation Risks to Forest Soils in Ireland' In: González, AA; Bengoetxea, NG (eds). Soil degradation risks in planted forests. Bilbao: Vitoria-Gasteiz : Eusko Jaurlaritzaren Argitalpen Zerbitzu Nagusia = Servicio Central de Publicacion. , pp.43-56  
Dr Pat Gibbons
e Milliano, C., M. Faling, A. Clark-Ginsberg, D. Crowley & P. Gibbons (2015) 'Resilience: The Holy Grail or Yet Another Hype?' In: Gibbons, P. & H. Heintze (eds). The Humanitarian Challenge: 20 Years European Network on Humanitarian Action. Heidelberg: Springer. , pp.17-30  
Dr Olga Grant
Jones, HG; Grant, OM (2014) 'Remote sensing and other imaging technologies to monitor grapevine performance' In: Gerós H, Chaves M, Medrano H, Delrot S (eds). Grapevine under environmental stress: from ecophysiology to molecular mechanisms. Hoboken, New Jersey: Wiley-Blackwell.  
Mr Charles Harper
Nieuwenhuis M, Ni Dhubhain A, Corrigan E, Bonsu N and Harper C (2015) 'Newmarket, Ireland' In: Riemer A (eds). Explorative future scenarios for integrated forest management in Europe. Leipzig, Germany: Fraunhofer. , pp.20-21  
Nieuwenhuis M, Ni Dhubhain A, Corrigan E, Bonsu N and Harper C (2015) 'Western Peatland, Ireland' In: Riemer A (eds). Explorative future scenarios for integrated forest management in Europe. Leipzig, Germany: Fraunhofer. , pp.22-23  
Professor James Lyng
Marra, F; Bedane, TF; Uyar, R; Erdogdu, F; Lyng, JG (2015) 'Application of Radiowave Frequency in Food Processing' In: Bhattacharya, S (eds). CONVENTIONAL AND ADVANCED FOOD PROCESSING TECHNOLOGIES. THE ATRIUM, SOUTHERN GATE, CHICHESTER PO19 8SQ, WEST SUSSEX, ENGLAND: JOHN WILEY & SONS LTD. , pp.501-513  
Professor Maarten Nieuwenhuis
Nieuwenhuis M, Ni Dhubhain A, Corrigan E, Bonsu N and Harper C (2015) 'Newmarket, Ireland' In: Riemer A (eds). Explorative future scenarios for integrated forest management in Europe. Leipzig, Germany: Fraunhofer. , pp.20-21  
Nieuwenhuis M, Ni Dhubhain A, Corrigan E, Bonsu N and Harper C (2015) 'Western Peatland, Ireland' In: Riemer A (eds). Explorative future scenarios for integrated forest management in Europe. Leipzig, Germany: Fraunhofer. , pp.22-23  
Dr Saoirse Tracy
Tracy SR, Mooney SJ, Sturrock CJ, Mairhofer S, Al-Traboulsi M, Bennett MJ, Pridmore TP, Lynch JP, Wells DM. (2015) 'Laboratory and field techniques for measuring root distribution and architecture' In: Ong C, Wilson J, Black CR (eds). Tree Crop interactions. England: CABI International Press.  
Dr Pádraig Wims
Wims, P. (2015) 'Chapter 20 The Potential of Social Media as a Communication Tool in Rural Community Development' In: Thomas, P.E., Srihari, M. and Kaur, S (eds). Handbook of Research on Cultural and Economic Impacts of the Information Society. Hershey PA, USA 17033: IGI Global. , pp.475-500  

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Books Edited
Dr Pat Gibbons
Gibbons, P. & H. Heintze (Ed.). (2015) The Humanitarian Challenge: 20 Years European Network on Humanitarian Action. Heidelberg: Springer.  
Dr James Kinsella
Jim Kinsella, Deirdre O'Connor, Brian Smyth and Roy Nelson (Ed.). (2014) Institutional Arrangements for Promoting and Enabling Social Farming in Ireland and Northern Ireland. Dublin: School of Agriculture and Food Science, UCD. Available Online  
Dr Eilín Walsh
Walsh, E., McDonell, K.P (Ed.). (2014) Aspects of using bio-fertilizers in the cultivation of energy crops. Saarbrücken, Germany: LAP - Lambert Academic Publishing.  

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Peer Reviewed Journals
Dr Bojlul Bahar
Chowdhury IH, Ahmed AM, Choudhuri S, Sen A, Hazra A, Pal NK, Bhattacharya B, Bahar B (2014) 'Alteration of serum inflammatory cytokines in active pulmonary tuberculosis following anti-tuberculosis drug therapy'. Molecular Immunology, 62 (1):159-168.  
Dr Tommy Boland
Beecher, M., Baumont, R., Aufrere, J., Boland, T.M., O'Donovan, M., Galvin, N., Fleming, C. And Lewis, E. (2015) 'A comparison of two enzymatic in vitro methods to predict in vivo organic matter digestibility of perennial ryegrass'. Livestock Science, 177 :33-42.  
Crosse, M., O'Donovan, M., Boland, T.M., Delaby, L. Ganche, E. and Kennedy, E. (2015) '2015. Using post-grazing sward height to impose dietary restrictions of varying duration in early lactation: its effects on sward and spring-calving dairy cow production'. Animal, 9 :592-603.  
Beecher, M. and Hennessy, D. and Boland, T.M. and Mcevoy, M. and O'Donovan, M. and Lewis, E. (2015) 'The variation in morphology of perennial ryegrass cultivars throughout the grazing season and effects on organic matter digestibility'. Grass and Forage Science, 70 (1):19-29. Available Online  
Lawrence, D.C. and O'Donovan, M. and Boland, T.M. and Lewis, E. and Kennedy, E. (2015) 'The effect of concentrate feeding amount and feeding strategy on milk production, dry matter intake, and energy partitioning of autumn-calving Holstein-Friesian cows'. Journal of Dairy Science, 98 (1):338-348. Available Online  
Ganche, E. and O'Donovan, M. and Delaby, L. and Boland, T.M. and Kennedy, E. (2015) 'Does post-grazing sward height influence sward characteristics, seasonal herbage dry-matter production and herbage quality?'. Grass and Forage Science, 70 (1):130-143. Available Online  
Deighton, M.H., Williams, S.R.O., Hannah, M.C., Eckard, R.J. Boland, T.M., Wales W.J. and Moate, P.J. (2014) 'A modified sulphur hexafluoride tracer technique enables accurate determination of enteric methane emissions from ruminants'. Animal Feed Science and Technology, 197 :47-63.  
Dr James Breen
Chiodi A, Donnellan T, Breen J, Deane JP, Hanrahan K, Gargiulo M, Ó Gallachóir BP (2015) 'Integrating agriculture and energy to assess GHG emissions reduction - a Methodological approach'. Climate Policy .  
Chiodi, A. and Donnellan, T. and Breen, J. and Deane, P. and Hanrahan, K. and Gargiulo, M. and ÿ Gallachóir, B.P. (2015) 'Integrating agriculture and energy to assess GHG emissions reduction: a methodological approach'. Climate Policy . Available Online  
Professor Lorraine Brennan
Morris, C., O'Grada, C. M., Ryan, M. F., Gibney, M. J., Roche, H. M., Gibney, E. R., Brennan, L. (2015) 'Modulation of the lipidomic profile due to a lipid challenge and fitness level: a postprandial study'. Lipids Health Dis, 14 .  
Marsaux, C. F., Celis-Morales, C., Fallaize, R., Macready, A. L., Kolossa, S., Woolhead, C., O'Donovan, C. B., Forster, H., Navas-Carretero, S., San-Cristobal, R., Lambrinou, C. P., Moschonis, G., Surwillo, A., Godlewska, M., Goris, A., Hoonhout, J., Drevon, C. A., Manios, Y., Traczyk, I., Walsh, M. C., Gibney, E. R., Brennan, L., Martinez, J. A., Lovegrove, J. A., Gibney, M. J., Daniel, H., Mathers, J. C., Saris, W. H. (2015) 'Effects of a Web-Based Personalized Intervention on Physical Activity in European Adults: A Randomized Controlled Trial'. J Med Internet Res, 17 (10). Available Online  
Matone, A., O'Grada, C. M., Dillon, E. T., Morris, C., Ryan, M. F., Walsh, M., Gibney, E. R., Brennan, L., Gibney, M. J., Morine, M. J., Roche, H. M. (2015) 'Body mass index mediates inflammatory response to acute dietary challenges'. Mol Nutr Food Res .  
Livingstone, K. M., Celis-Morales, C., Lara, J., Ashor, A. W., Lovegrove, J. A., Martinez, J. A., Saris, W. H., Gibney, M., Manios, Y., Traczyk, I., Drevon, C. A., Daniel, H., Gibney, E. R., Brennan, L., Bouwman, J., Grimaldi, K. A., Mathers, J. C., Food4Me, (2015) 'Associations between FTO genotype and total energy and macronutrient intake in adults: a systematic review and meta-analysis'. Obes Rev, 16 (8):666-78.  
O'Donovan, C. B., Walsh, M. C., Gibney, M. J., Gibney, E. R., Brennan, L. (2015) 'Can metabotyping help deliver the promise of personalised nutrition?'. Proc Nutr Soc, :1-9.  
Woolhead, C., Gibney, M. J., Walsh, M. C., Brennan, L., Gibney, E. R. (2015) 'A generic coding approach for the examination of meal patterns'. American Journal of Clinical Nutrition, 102 (2):316-23.  
Morris C, O'Grada CM, Ryan MF, Gibney MJ, Roche HM, Gibney ER, Brennan L (2015) 'Modulation of the lipidomic profile due to a lipid challenge and fitness level: a postprandial study'. Lipids in Health and Disease, 14 (1).  
Leite, J. C., Forte, R., de Vito, G., Boreham, C. A., Gibney, M. J., Brennan, L., Gibney, E. R. (2015) 'Comparison of the effect of multicomponent and resistance training programs on metabolic health parameters in the elderly'. Arch Gerontol Geriatr, 60 (3):412-7.  
Forster, H., Walsh, M. C., Gibney, M. J., Brennan, L., Gibney, E. R. (2015) 'Personalised nutrition: the role of new dietary assessment methods'. Proc Nutr Soc, :1-10.  
Leite JC, Forte R, de Vito G, Boreham CA, Gibney MJ, Brennan L, Gibney ER (2015) 'Comparison of the effect of multicomponent and resistance training programs on metabolic health parameters in the elderly'. Archives Of Gerontology And Geriatrics, 60 (3):412-417.  
Lindsay KL, Brennan L;Kennelly MA;Maguire OC;Smith T;Curran S;Coffey M;Foley ME;Hatunic M;Shanahan F;McAuliffe FM (2015) 'Impact of probiotics in women with gestational diabetes mellitus on metabolic health: a randomized controlled trial'. American Journal of Obstetrics and Gynecology, 212 (4):4960-4911.  
Livingstone, K. M., Celis-Morales, C., Navas-Carretero, S., San-Cristobal, R., O'Donovan, C. B., Forster, H., Woolhead, C., Marsaux, C. F., Macready, A. L., Fallaize, R., Kolossa, S., Tsirigoti, L., Lambrinou, C. P., Moschonis, G., Godlewska, M., Surwillo, A., Drevon, C. A., Manios, Y., Traczyk, I., Gibney, E. R., Brennan, L., Walsh, M. C., Lovegrove, J. A., Alfredo Martinez, J., Saris, W. H., Daniel, H., Gibney, M., Mathers, J. C. (2015) 'Profile of European adults interested in internet-based personalised nutrition: the Food4Me study'. Eur J Nutr .  
O'Donovan, C. B., Walsh, M. C., Nugent, A. P., McNulty, B., Walton, J., Flynn, A., Gibney, M. J., Gibney, E. R., Brennan, L. (2015) 'Use of metabotyping for the delivery of personalised nutrition'. Mol Nutr Food Res, 59 (3):377-85.  
Lindsay KL, Brennan L, Kennelly MA, Maguire OC, Smith T, Curran S, Coffey M, Foley ME, Hatunic M, Shanahan F, McAuliffe FM (2015) 'Impact of probiotics in women with gestational diabetes mellitus on metabolic health: A randomized controlled trial'. American Journal of Obstetrics and Gynecology .  
González-Guardia, L. and Yubero-Serrano, E.M. and Delgado-Lista, J. and Perez-Martinez, P. and Garcia-Rios, A. and Marin, C. and Camargo, A. and Delgado-Casado, N. and Roche, H.M. and Perez-Jimenez, F. and Brennan, L. and López-Miranda, J. (2015) 'Effects of the mediterranean diet supplemented with coenzyme Q10 on metabolomic profiles in elderly men and women'. Journals of Gerontology - Series A Biological Sciences and Medical Sciences, 70 (1):78-84. Available Online  
Lindsay, K.L. and Heneghan, C. and McNulty, B. and Brennan, L. and McAuliffe, F.M. (2015) 'Lifestyle and Dietary Habits of an Obese Pregnant Cohort'. Maternal and child health journal, 19 (1):25-32. Available Online  
Gibbons, H. and O'Gorman, A. and Brennan, L. (2015) 'Metabolomics as a tool in nutritional research'. Current Opinion in Lipidology, 26 (1):30-34. Available Online  
Celis-Morales, C., Livingstone, K. M., Marsaux, C. F., Forster, H., O'Donovan, C. B., Woolhead, C., Macready, A. L., Fallaize, R., Navas-Carretero, S., San-Cristobal, R., Kolossa, S., Hartwig, K., Tsirigoti, L., Lambrinou, C. P., Moschonis, G., Godlewska, M., Surwillo, A., Grimaldi, K., Bouwman, J., Daly, E. J., Akujobi, V., O'Riordan, R., Hoonhout, J., Claassen, A., Hoeller, U., Gundersen, T. E., Kaland, S. E., Matthews, J. N., Manios, Y., Traczyk, I., Drevon, C. A., Gibney, E. R., Brennan, L., Walsh, M. C., Lovegrove, J. A., Alfredo Martinez, J., Saris, W. H., Daniel, H., Gibney, M., Mathers, J. C. (2015) 'Design and baseline characteristics of the Food4Me study: a web-based randomised controlled trial of personalised nutrition in seven European countries'. Genes Nutr, 10 (1).  
Livingstone, K.M. and Celis-Morales, C. and Navas-Carretero, S. and San-Cristobal, R. and O?Donovan, C.B. and Forster, H. and Woolhead, C. and Marsaux, C.F.M. and Macready, A.L. and Fallaize, R. and Kolossa, S. and Tsirigoti, L. and Lambrinou, C.P. and Moschonis, G. and Godlewska, M. and Surwi??o, A. and Drevon, C.A. and Manios, Y. and Traczyk, I. and Gibney, E.R. and Brennan, L. and Walsh, M.C. and Lovegrove, J.A. and Alfredo Martinez, J. and Saris, W.H. and Daniel, H. and Gibney, M. and Mathers, J.C. (2015) 'Profile of European adults interested in internet-based personalised nutrition: the Food4Me study'. European Journal of Nutrition . Available Online  
O'Donovan, C.B. and Walsh, M.C. and Nugent, A.P. and Mcnulty, B. and Walton, J. and Flynn, A. and Gibney, M.J. and Gibney, E.R. and Brennan, L. (2015) 'Use of metabotyping for the delivery of personalised nutrition'. Molecular Nutrition and Food Research . Available Online  
Lindsay KL, Heneghan C, McNulty B, Brennan L, McAuliffe FM (2015) 'Lifestyle and dietary habits of an obese pregnant cohort'. Maternal and Child Health Journal, 19 (1):25-32.  
Nyamundanda, G., Gormley, I.C. and Brennan, L. (2014) 'A dynamic probabilistic principal components model for the analysis of longitudinal metabolomics data'. Journal of the Royal Statistical Society: Series C (Applied Statistics) .  
Lindsay KL, Brennan L, McAuliffe FM (2014) 'Reply to C Griffin'. The Journal of clinical nutrition, 100 (4):1209-1210.  
Walsh JM, Wallace M, Brennan L, McAuliffe FM (2014) 'Early pregnancy maternal urinary metabolomic profile and later insulin resistance and fetal adiposity'. Journal of Maternal-Fetal and Neonatal Medicine, :1-4.  
O'Gorman A, Morris C, Ryan M, O'Grada CM, Roche HM, Gibney ER, Gibney MJ, Brennan L (2014) 'Habitual dietary intake impacts on the lipidomic profile'. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 966 :140-146.  
O'Gorman, A., Morris, C., Ryan, M., O'Grada, C. M., Roche, H. M., Gibney, E. R., Gibney, M. J., Brennan, L. (2014) 'Habitual dietary intake impacts on the lipidomic profile'. J Chromatogr B Analyt Technol Biomed Life Sci, 966 :140-6.  
Dr Nigel Patrick Brunton
Cian, Raúl E., Vioque, Javier, Drago, Silvina R. (2015) 'Structure?mechanism relationship of antioxidant and ACE I inhibitory peptides from wheat gluten hydrolysate fractionated by pH'. Food Research International, 69 :216-223. Available Online  
Aguiló-Aguayo, Ingrid, Abreu, Corina, Hossain, Mohammad B, Altisent, Rosa, Brunton, Nigel, Viñas, Inmaculada, Rai, Dilip K (2015) 'Exploring the Effects of Pulsed Electric Field Processing Parameters on Polyacetylene Extraction from Carrot Slices'. Molecules, 20 (3):3942-3954.  
Hossain, Mohammad B, Rai, Dilip K, Brunton, Nigel P (2015) 'Optimisation and validation of ultra-high performance liquid chromatographic-tandem mass spectrometry method for qualitative and quantitative analysis of potato steroidal alkaloids'. Journal of Chromatography B .  
Harris, S., Brunton, N., Tiwari, U., Cummins, E. (2015) 'Human exposure modelling of quercetin in onions (Allium cepa L.) following thermal processing'. Food Chemistry, 187 (0):135-139. Available Online  
Gangopadhyay, Nirupama, Hossain, Mohammad B., Rai, Dilip K., Brunton, Nigel P. (2015) 'Optimisation of yield and molecular weight of ?-glucan from barley flour using response surface methodology'. Journal of Cereal Science, 62 (0):38-44. Available Online  
Hossain, Mohammad B, Rawson, Ashish, Aguiló-Aguayo, Ingrid, Brunton, Nigel P, Rai, Dilip K (2015) 'Recovery of Steroidal Alkaloids from Potato Peels Using Pressurized Liquid Extraction'. Molecules, 20 (5):8560-8573.  
Grasso, S., Brunton, N. P., Monahan, F. J., Harrison, S.M. (2015) 'Development of a Method for the Analysis of Sterols in Sterol-Enriched Deli-Style Turkey with GC-FID'. Food Analytical Methods .  
Kenny, O., Brunton, N. P., Walsh, D., Hewage, C. M., McLoughlin, P., Smyth, T. J. (2015) 'Characterisation of Antimicrobial Extracts from Dandelion Root (Taraxacum officinale) Using LC-SPE-NMR'. Phytotherapy Research .  
Cristina Arroyo, , Sara Eslami, , Nigel P. Brunton, , Joshua M. Arimi, , Francesco Noci and , James G. Lyng1 (2015) 'An assessment of the impact of pulsed electric fields processing factors on oxidation, color, texture, and sensory attributes of turkey breast meat'. Poultry Science .  
Gangopadhyay, Nirupama, Hossain, Mohammad, Rai, Dilip, Brunton, Nigel (2015) 'A Review of Extraction and Analysis of Bioactives in Oat and Barley and Scope for Use of Novel Food Processing Technologies'. Molecules, 20 (6). Available Online  
Heffernan, Natalie, Brunton, Nigel, FitzGerald, Richard, Smyth, Thomas (2015) 'Profiling of the Molecular Weight and Structural Isomer Abundance of Macroalgae-Derived Phlorotannins'. Marine Drugs, 13 (1):509-528. Available Online  
Ignat, Alexandra, Manzocco, Lara, Brunton, Nigel P, Nicoli, Maria Cristina, Lyng, James G (2015) 'The effect of pulsed electric field pre-treatments prior to deep-fat frying on quality aspects of potato fries'. Innovative Food Science & Emerging Technologies, 29 :65-69.  
O’Keeffe, Roisin, Kenny, Olivia, Brunton, Nigel P., Hossain, Mohammad B., Rai, Dilip K., Jones, Peter W., O’Brien, Nora, Maguire, Anita R., Collins, Stuart G. (2015) 'Synthesis of novel 24-amino-25,26,27-trinorlanost-8-enes: Cytotoxic and Apoptotic Potential in U937 Cells'. Bioorganic and Medicinal Chemistry, 23 (9):2270-2280. Available Online  
Kenny, Owen, Brunton, Nigel P, Smyth, Thomas J (2015) 'In Vitro Protocols for Measuring the Antioxidant Capacity of Algal Extracts'. Methods in molecular biology (Clifton, N.J.), :375-402.  
Hossain, Mohammad B., Aguiló-Aguayo, Ingrid, Lyng, James G., Brunton, Nigel P., Rai, Dilip K. (2015) 'Effect of pulsed electric field and pulsed light pre-treatment on the extraction of steroidal alkaloids from potato peels'. Innovative Food Science and Emerging Technologies, 29 (0):9-14. Available Online  
Aguilo-Aguayo, I., Suarez, M., Plaza, L., Hossain, M. B., Brunton, N., Lyng, J. G., Rai, D. K. (2014) 'Optimization of pulsed electric field pre-treatments to enhance health-promoting glucosinolates in broccoli flowers and stalk'. Journal of the Science of Food and Agriculture .  
Dr Brídín Carroll
Carroll, B.; Fahy, F. (2014) 'Locating the locale of local food: the importance of context, space and social relations'. Renewable Agriculture and Food Systems, :1-14. Available Online  
Dr Michelle Clarke
Clarke M, Ward M, Dickey W, Hoey L, Molloy AM, Waldron L, Varghese A, McCann A, Blayney JK & McNulty H. (2015) 'B-vitamin status in relation to bone mineral density in treated celiac disease patients'. Scandinavian Journal of Gastroenterology, :975-984.  
Dr Daniel Crean
Crean D, Cummins EP, Bahar B, Mohan H, McMorrow JP, Murphy EP (2015) 'Adenosine Modulates NR4A Orphan Nuclear Receptors To Attenuate Hyperinflammatory Responses in Monocytic Cells'. Immunology, 195 (4):1436-1448.  
Murphy EP, Crean D (2015) 'Molecular Interactions between NR4A Orphan Nuclear Receptors and NF-kB Are Required for Appropriate Inflammatory Responses and Immune Cell Homeostasis'. Biomolecules, 5 (3):1302-1318.  
Crean D, Godson C (2015) 'Specialised lipid mediators and their targets'. Seminars in immunology .  
Jennings P, Crean D, Aschauer L, Limonciel A, Moenks K, Kern G, Hewitt P, Lhotta K, Lukas A, Wilmes A, Leonard MO. (2015) 'Interleukin-19 as a translational indicator of renal injury'. Archives of Toxicology .  
Crean D, Bellwon P, Aschauer L, Limonciel A, Moenks K, Hewitt P, Schmidt T, Herrgen K, Dekant W, Lukas A, Bois F, Wilmes A, Jennings P, Leonard MO. (2014) 'Development of an in vitro renal epithelial disease state model for xenobiotic toxicity testing'. Toxicology in Vitro .  
Dr Thomas Cummins
Johnson, Jim; Aherne, Julian; Cummins, Thomas (2015) 'Base cation budgets under residue removal in temperate maritime plantation forests'. Forest Ecology and Management, 343 :144-156. Available Online  
Dr Ger Jason Devlin
Amanda Sosa, Mauricio Acuna, Kevin McDonnell and Ger Devlin (2015) 'Managing the moisture content of wood biomass for the optimisation of Ireland's transport supply strategy to bioenergy markets and competing industries'. Energy, (86):354-368.  
Fionnuala Murphy, Ger Devlin and Kevin McDonnell (2015) 'Benchmarking Environmental Impacts of Peat Use for Electricity Generation in Ireland - A Life Cycle Assessment'. Sustainability Journal, (7):6376-6393.  
Amanda Sosa, Radomir Klvac, Enda Coates, Tom Kent and Ger Devlin1*. (2015) 'Improving Log Loading Efficiency for Improved Sustainable Transport within the Irish Forest and Biomass Sector'. Sustainability Journal, 7 (Special Issue):3017-3030.  
A. Sosa, M. Acuna, K McDonnell and G. Devlin (2015) 'Controlling Moisture Content and Truck Configuration to Optimise Biomass Supply Chains in Ireland'. Applied Energy, 137 :338-351.  
Murphy, F., Devlin, G., McDonnell, K. (2015) 'Greenhouse gas and energy based life cycle analysis of products from the Irish wood processing industry'. Journal of Cleaner Production .  
G. Devlin and R. Klvac (2014) 'How Technology Can Improve the Efficiency of Excavator Based Cable Yarding for Potential Biomass Extraction - A Woody Productivity Resource and Cost Analysis for Ireland'. Energies, 2014 (7):8374-8395.  
Dr Owen Doyle
Sean Storey, Dearbháil Ní Chualain, Owen Doyle, Nicholas Clipson, Evelyn Doyle (2015) 'Comparison of bacterial succession in green waste composts amended with inorganic fertiliser and wastewater treatment plant sludge Sean Storey, Dearbháil Ní Chualain, Owen Doyle, Nicholas Clipson, Evelyn Doyle'. Bioresource Technology, 179 :71-77. Available Online  
Professor Alexander Evans
Murphy BA, Blake CM;Brown JA;Martin AM;Forde N;Sweeney LM;Evans AC (2015) 'Evidence of a molecular clock in the ovine ovary and the influence of photoperiod'. Theriogenology, 84 (2):208-216.  
Zhao S, Liu ZX;Gao H;Wu Y;Fang Y;Wu SS;Li MJ;Bai JH;Liu Y;Evans A;Zeng SM (2015) 'A three-dimensional culture system using alginate hydrogel prolongs hatched cattle embryo development in vitro'. Theriogenology, 84 (2):184-192.  
Parr, M. H. and Crowe, M. A. and Lonergan, P. and Evans, A. C. O. and Fair, T. and Diskin, M. G. (2015) 'The concurrent and carry over effects of long term changes in energy intake before insemination on pregnancy per artificial insemination in heifers'. Animal Reproduction Science, 157 :87-94.  
Jimenez-Krassel F, Scheetz DM;Neuder LM;Ireland JL;Pursley JR;Smith GW;Tempelman RJ;Ferris T;Roudebush WE;Mossa F;Lonergan P;Evans AC;Ireland JJ (2015) 'Concentration of anti-Mullerian hormone in dairy heifers is positively associated with productive herd life'. Journal of Dairy Science, 98 (5):3036-3045.  
Scully, S. and Evans, A.C.O. and Carter, F. and Duffy, P. and Lonergan, P. and Crowe, M.A. (2015) 'Ultrasound monitoring of blood flow and echotexture of the corpus luteum and uterus during early pregnancy of beef heifers'. Theriogenology, 83 (3):449-458. Available Online  
Parr MH, Crowe MA, Lonergan P, Evans AC, Rizos D, Diskin MG (2014) 'Effect of exogenous progesterone supplementation in the early luteal phase post-insemination on pregnancy per artificial insemination in Holstein-Friesian cows'. Animal Reproduction Science, 150 (1-2):7-14.  
Zielak-Steciwko AE, Browne JA, McGettigan PA, Gajewska M, Dzi?cio? M, Szulc T, Evans AC (2014) 'Expression of microRNAs and their target genes and pathways associated with ovarian follicle development in cattle'. Genomics, 46 (19):735-745.  
Tharmalingam-Jaikaran T, Walsh SW, McGettigan PA, Potter O, Struwe WB, Evans AC, Rudd PM, Carrington S (2014) 'N-glycan profiling of bovine follicular fluid at key dominant follicle developmental stages'. Reproduction .  
Dr Alan Fahey
B.J. McMahon, P.G. Wall, S. Fanning, and A.G. Fahey (2015) 'Targets to increase food production: One Health implications'. Infection Ecology & Epidemiology .  
Dr Trudee Fair
Parr, M. H. and Crowe, M. A. and Lonergan, P. and Evans, A. C. O. and Fair, T. and Diskin, M. G. (2015) 'The concurrent and carry over effects of long term changes in energy intake before insemination on pregnancy per artificial insemination in heifers'. Animal Reproduction Science, 157 :87-94.  
Anckaert E, Fair T (2015) 'DNA methylation reprogramming during oogenesis and interference by reproductive technologies: Studies in mouse and bovine models'. Journal of Reproduction and Fertility .  
O'Doherty AM, Magee DA, O'Shea LC, Forde N, Beltman ME, Mamo S, Fair T (2015) 'DNA methylation dynamics at imprinted genes during bovine pre-implantation embryo development'. BMC Developmental Biology, 10 (15).  
Fair T. (2015) 'The contribution of the maternal immune system to the establishment of pregnancy in cattle'. Frontiers in Immunology, 28 (6).  
Moore SG, Scully S, Browne JA, Fair T*, Butler ST (2014) 'Genetic merit for fertility traits in Holstein cows: V. Factors affecting circulating progesterone concentrations'. Journal of Dairy Science, 97 (9):5543-5557.  
Dr Angela Feechan
Wenping Qiu, Angela Feechan & Ian Dry (2015) 'Current understanding of grapevine defense mechanisms against the biotrophic fungus (Erysiphe necator), the causal agent of powdery mildew disease'. Horticulture Research .  
Feechan, A., Kocsis, M., Riaz, S., Zhang, W., Gadoury, D.M., Andrew Walker, A., Dry, I.B., Reisch, B., Cadle-Davidson, L. (2015) 'Strategies for RUN1 deployment using RUN2 and REN2 to manage grapevine powdery mildew informed by studies of race-specificity'. Phytopathology .  
Dr Emma Feeney
Hayes JE, Feeney EL, Nolden AA, McGeary JE. (2015) 'Quinine Bitterness and Grapefruit Liking Associate with Allelic Variants in TAS2R31'. Chemical Senses, 40 (6):437-443. Available Online  
Dr John Fry
Gonzalez, Ainhoa and Theriyel, Riki and Fry, John and Foley, Walter (2015) 'Advancing practice relating to SEA alternatives'. ENVIRONMENTAL IMPACT ASSESSMENT REVIEW, 53 :52-63.  
Dr Pat Gibbons
McDermott, R., P. Gibbons, H. Spieker & S. Malesevic (2015) 'Cross-border Disaster Response and the Law'. Irish Journal of Legal Studies (IJLS), Vol. 5 (2):1-23.  
Dr Eileen Gibney
Forster, Hannah and Walsh, Marianne C and Gibney, Michael J and Brennan, Lorraine and Gibney, Eileen R (2015) 'Personalised nutrition: the role of new dietary assessment methods'. Proceedings of the Nutrition Society, :1-10.  
Woolhead, Clara and Gibney, Michael J and Walsh, Marianne C and Brennan, Lorraine and Gibney, Eileen R (2015) 'A generic coding approach for the examination of meal patterns'. American Journal of Clinical Nutrition, 102 (2):316-323.  
Horan, M. K., McGowan, C. A., Gibney, E. R., Donnelly, J. M., McAuliffe, F. M. (2015) 'The association between maternal dietary micronutrient intake and neonatal anthropometry - secondary analysis from the ROLO study'. Nutr J, 14 (1).  
Marsaux, C. F., Celis-Morales, C., Fallaize, R., Macready, A. L., Kolossa, S., Woolhead, C., O'Donovan, C. B., Forster, H., Navas-Carretero, S., San-Cristobal, R., Lambrinou, C. P., Moschonis, G., Surwillo, A., Godlewska, M., Goris, A., Hoonhout, J., Drevon, C. A., Manios, Y., Traczyk, I., Walsh, M. C., Gibney, E. R., Brennan, L., Martinez, J. A., Lovegrove, J. A., Gibney, M. J., Daniel, H., Mathers, J. C., Saris, W. H. (2015) 'Effects of a Web-Based Personalized Intervention on Physical Activity in European Adults: A Randomized Controlled Trial'. J Med Internet Res, 17 (10). Available Online  
Spence, M and L\"ahteenm\"aki, Liisa and Stefan, V and Livingstone, MBE and Gibney, ER and Dean, M (2015) 'Quantifying consumer portion control practices. A cross-sectional study'. Appetite, 92 :240-246.  
Livingstone, KM and Celis-Morales, C and Lara, J and Ashor, AW and Lovegrove, JA and Martinez, JA and Saris, WH and Gibney, M and Manios, Y and Traczyk, I and others (2015) 'Associations between FTO genotype and total energy and macronutrient intake in adults: a systematic review and meta-analysis'. Obesity Reviews .  
Siervo, Mario and Faber, Peter and Lara, Jose and Gibney, Eileen R and Milne, Eric and Ritz, Patrick and Lobley, Gerald E and Elia, Marinos and Stubbs, R James and Johnstone, Alexandra M (2015) 'Imposed rate and extent of weight loss in obese men and adaptive changes in resting and total energy expenditure'. Metabolism .  
O'Brien, Sinead A and Livingstone, M Barbara E and McNulty, Breige A and Lyons, Jacqueline and Walton, Janette and Flynn, Albert and Segurado, Ricardo and Dean, Moira and Spence, Michelle and McCaffrey, Tracy A and others (2015) 'Secular trends in reported portion size of food and beverages consumed by Irish adults'. British Journal of Nutrition, 113 (07):1148-1157.  
San-Cristobal, Rodrigo and Navas-Carretero, Santiago and Celis-Morales, Carlos and Brennan, Lorraine and Walsh, Marianne and Lovegrove, Julie A and Daniel, Hannelore and Saris, Wim HM and Traczyk, Iwonna and Manios, Yannis and others (2015) 'Analysis of Dietary Pattern Impact on Weight Status for Personalised Nutrition through On-Line Advice: The Food4Me Spanish Cohort'. Nutrients, 7 (11):9523-9537.  
Hoeller, Ulrich and Baur, Manuela and Roos, Franz F and Brennan, Lorraine and Daniel, Hannelore and Fallaize, Rosalind and Forster, Hannah and Gibney, Eileen R and Gibney, Mike and Godlewska, Magdalena and others (2015) 'Application of dried blood spots to determine vitamin D status in a large nutritional study with unsupervised sampling: the Food4Me project'. British Journal of Nutrition, :1-10.  
Marsaux, Cyril FM and Celis-Morales, Carlos and Fallaize, Rosalind and Macready, Anna L and Kolossa, Silvia and Woolhead, Clara and O'Donovan, Clare B and Forster, Hannah and Navas-Carretero, Santiago and San-Cristobal, Rodrigo and others (2015) 'Effects of a Web-Based Personalized Intervention on Physical Activity in European Adults: A Randomized Controlled Trial'. Journal of medical Internet research, 17 (10).  
Deac, Oana M and Mills, James L and Shane, Barry and Midttun, \Oivind and Ueland, Per M and Brosnan, John T and Brosnan, Margaret E and Laird, Eamon and Gibney, Eileen R and Fan, Ruzong and others (2015) 'Tryptophan Catabolism and Vitamin B-6 Status Are Affected by Gender and Lifestyle Factors in Healthy Young Adults'. The Journal of nutrition, 145 (4):701-707.  
Matone, A., O'Grada, C. M., Dillon, E. T., Morris, C., Ryan, M. F., Walsh, M., Gibney, E. R., Brennan, L., Gibney, M. J., Morine, M. J., Roche, H. M. (2015) 'Body mass index mediates inflammatory response to acute dietary challenges'. Mol Nutr Food Res .  
O'Donovan, C. B., Walsh, M. C., Gibney, M. J., Gibney, E. R., Brennan, L. (2015) 'Can metabotyping help deliver the promise of personalised nutrition?'. Proc Nutr Soc, :1-9.  
Carter, T. C., Pangilinan, F., Molloy, A. M., Fan, R., Wang, Y., Shane, B., Gibney, E. R., Midttun, O., Ueland, P. M., Cropp, C. D., Kim, Y., Wilson, A. F., Bailey-Wilson, J. E., Brody, L. C., Mills, J. L. (2015) 'Common Variants at Putative Regulatory Sites of the Tissue Nonspecific Alkaline Phosphatase Gene Influence Circulating Pyridoxal 5'-Phosphate Concentration in Healthy Adults'. Journal of Nutrition, 145 (7):1386-93. Available Online  
Morris C, O'Grada CM, Ryan MF, Gibney MJ, Roche HM, Gibney ER, Brennan L (2015) 'Modulation of the lipidomic profile due to a lipid challenge and fitness level: a postprandial study'. Lipids in Health and Disease, 14 (1).  
Leite JC, Forte R, de Vito G, Boreham CA, Gibney MJ, Brennan L, Gibney ER (2015) 'Comparison of the effect of multicomponent and resistance training programs on metabolic health parameters in the elderly'. Archives Of Gerontology And Geriatrics, 60 (3):412-417.  
Deac, O. M., Mills, J. L., Shane, B., Midttun, O., Ueland, P. M., Brosnan, J. T., Brosnan, M. E., Laird, E., Gibney, E. R., Fan, R., Wang, Y., Brody, L. C., Molloy, A. M. (2015) 'Tryptophan catabolism and vitamin B-6 status are affected by gender and lifestyle factors in healthy young adults'. Journal of Nutrition, 145 (4):701-7.  
Kelly, F., Gibney, E. R., Boilson, A., Staines, A., Sweeney, M. R. (2015) 'Folic acid levels in some food staples in Ireland are on the decline: implications for passive folic acid intakes?'. J Public Health (Oxf) .  
O'Donovan, C. B., Walsh, M. C., Nugent, A. P., McNulty, B., Walton, J., Flynn, A., Gibney, M. J., Gibney, E. R., Brennan, L. (2015) 'Use of metabotyping for the delivery of personalised nutrition'. Mol Nutr Food Res, 59 (3):377-85.  
Celis-Morales, C., Livingstone, K. M., Marsaux, C. F., Forster, H., O'Donovan, C. B., Woolhead, C., Macready, A. L., Fallaize, R., Navas-Carretero, S., San-Cristobal, R., Kolossa, S., Hartwig, K., Tsirigoti, L., Lambrinou, C. P., Moschonis, G., Godlewska, M., Surwillo, A., Grimaldi, K., Bouwman, J., Daly, E. J., Akujobi, V., O'Riordan, R., Hoonhout, J., Claassen, A., Hoeller, U., Gundersen, T. E., Kaland, S. E., Matthews, J. N., Manios, Y., Traczyk, I., Drevon, C. A., Gibney, E. R., Brennan, L., Walsh, M. C., Lovegrove, J. A., Alfredo Martinez, J., Saris, W. H., Daniel, H., Gibney, M., Mathers, J. C. (2015) 'Design and baseline characteristics of the Food4Me study: a web-based randomised controlled trial of personalised nutrition in seven European countries'. Genes Nutr, 10 (1).  
Livingstone, K.M. and Celis-Morales, C. and Navas-Carretero, S. and San-Cristobal, R. and O?Donovan, C.B. and Forster, H. and Woolhead, C. and Marsaux, C.F.M. and Macready, A.L. and Fallaize, R. and Kolossa, S. and Tsirigoti, L. and Lambrinou, C.P. and Moschonis, G. and Godlewska, M. and Surwi??o, A. and Drevon, C.A. and Manios, Y. and Traczyk, I. and Gibney, E.R. and Brennan, L. and Walsh, M.C. and Lovegrove, J.A. and Alfredo Martinez, J. and Saris, W.H. and Daniel, H. and Gibney, M. and Mathers, J.C. (2015) 'Profile of European adults interested in internet-based personalised nutrition: the Food4Me study'. European Journal of Nutrition . Available Online  
Dr Margherita Gioria
Gioria, M; Pysek P (2015) 'The legacy of plant invasions: changes in the soil seed bank of invaded plant communities'. Bioscience .  
Bacaro, G; Maccherini, S; Chiarucci, A; Jentsch, A; Rocchini, D; Torri, D; Gioria, M; Tordoni, E; Martellos, S; Otto, R; Escudero, CG; Fernandez-Lugo, S; Fernandez-Palacios, JM; Arávalo, JR (2015) 'Distributional patterns of endemic, native and alien species along a roadside elevational gradient in Tenerife, Canary Islands'. Community Ecology .  
Gioria M, Osborne B (2014) 'Resource competition in plant invasions: emerging patterns and research needs'. Frontiers in Plant Science .  
Dr Olga Grant
Grant, O.M.; Tronina, L.; García-Plazaola, F.I.; Esteban, R.; Santos Pereira, J.; Chaves, M.M. (2015) 'Resilience of a semi-deciduous shrub, Cistus salvifolius, to severe summer drought and heat stress'. Functional Plant Biology .  
Glombik, P.; O’Reilly, C.; Grant, O.M. (2015) 'Early-height variation between full-sibling families of Sitka spruce growing in Ireland'. Irish Forestry .  
Johnson, A.W.; Davies, M.J.; Grant, O.M.; Simpson, D.W. (2014) 'Developing strawberry cultivars with improved water use efficiency'. Acta Horticulturae, 1049 .  
Dr Scott Hutchings
Scott C. Hutchings, Michael O'Sullivan, Jean-Christophe Jacquier, Dolores O'Riordan (2015) 'The effect of inhomogeneous quinine and hydrocolloid distributions on the bitterness of model gels'. Food Quality and Preference, 45 :132-139.  
Dr Julio Isidro S?hez
Isidro J, Jannink JL, Poland J, Akdemir D, Heslot N, Sorrells ME (2015) 'Training set optimization under population structure in genomic selection'. Theoretical and Applied Genetics .  
Deniz Akdemir, Julio Isidro Sanchez, Jean-Luc Jannink (2015) 'Optimization of genomic selection training populations with a genetic algorithm'. Genetics Selection Evolution .  
Dr Jean-Christophe Jacquier
O'Neill, G.J. and Egan, T. and Jacquier, J.C. and O'Sullivan, M. and Dolores O'Riordan, E. (2015) 'Kinetics of immobilisation and release of tryptophan, riboflavin and peptides from whey protein microbeads'. Food Chemistry, 180 :150-155. Available Online  
Hutchings, S., O’Sullivan, M., Jacquier, JC. O’Riordan, (2015) 'The effect of inhomogeneous quinine and hydrocolloid distributions on the bitterness of model gels'. Food Quality and Preference, 45 :132-139.  
O’Neill, Jacquier, JC, O’Sullivan, M, and O’Riordan, D. (2015) 'Kinetics of immobilization and release of tryptophan, riboflavin and peptides from whey protein microbeads'. Food Chemistry, 180 :150-155.  
Dr Jim Johnson
Harrison, S.C., Hutton, S., Baars, J-R., Cruikshanks, R., Johnson, J., Juhel, G., Kirakowski, T., Matson, R., O'Halloran, J., Phelan, P. and Kelly-Quinn, M. (2014) 'Contrasting impacts of conifer forests on brown trout and Atlantic salmon in headwater streams in Ireland'. Biology and Environment-Proceedings of the Royal Irish Academy, 114 :219-232.  
Waldner, Peter and Marchetto, Aldo and Thimonier, Anne and Schmitt, Maria and Rogora, Michela and Granke, Oliver and Mues, Volker and Hansen, Karin and Karlsson, Gunilla Pihl and Zlindra, Daniel and Clarke, Nicholas and Verstraeten, Arne and Lazdins, Andis and Schimming, Claus and Iacoban, Carmen and Lindroos, Antti-Jussi and Vanguelova, Elena and Benham, Sue and Meesenburg, Henning and Nicolas, Manuel and Kowalska, Anna and Apuhtin, Vladislav and Napa, Ulle and Lachmanova, Zora and Kristoefel, Ferdinand and Bleeker, Albert and Ingerslev, Morten and Vesterdal, Lars and Molina, Juan and Fischer, Uwe and Seidling, Walter and Jonard, Mathieu and O'Dea, Philip and Johnson, James and Fischer, Richard and Lorenz, Martin (2014) 'Detection of temporal trends in atmospheric deposition of inorganic nitrogen and sulphate to forests in Europe'. ATMOSPHERIC ENVIRONMENT, 95 :363-374.  
Johnson, James, Julian Aherne and Thomas Cummins (2014) 'Assessing the impact of residue removal on base cation budgets in temperate maritime plantation forests'. Forest Ecology and Management .  
Dr Alan Kelly
Keogh, K, Waters, SM, Kelly, AK, Kenny, DA (2015) 'Feed restriction and subsequent realimentation in Holstein Friesian bulls: I. Effect on animal performance; muscle, fat, and linear body measurements; and slaughter characteristics'. Journal of animal science, 93 (7):3578-3589.  
Keane, M. P., McGee, M., O?Riordan, E. G., Kelly, A. K., Earley, B. (2015) 'Effect of floor type on hoof lesions, dirt scores, immune response and production of beef bulls'. Livestock Science, 180 :220-225. Available Online  
Forde, Niamh, O'Gorman, Aoife, Whelan, Helena, Duffy, Patrick, O'Hara, Lydia, Kelly, Alan, Havlicek, Vitezslav, Besenfelder, Urban, Brennan, Lorraine, Lonergan, Patrick (2015) 'Lactation-induced changes in metabolic status and follicular fluid metabolomic profile in post-partum dairy cows'. Reproduction, Fertility and Development .  
Keogh, Kate, Waters, Sinéad M, Kelly, Alan K, Wylie, Alastair RG, Kenny, David A (2015) 'Effect of feed restriction and subsequent re-alimentation on hormones and genes of the somatotropic axis in cattle'. Physiological genomics .  
Keogh, Kate, Kenny, David A, Kelly, Alan K, Waters, Sinéad M (2015) 'Insulin secretion and signalling in response to dietary restriction and subsequent re-alimentation in cattle'. Physiological genomics .  
Cashman, Kevin, Duffy, Sarah, Hayes, Aoife, Seamans, Kelly, Kerry, Joe, Kelly, Alan, Jakobsen, Jette, O'Doherty, John (2015) 'Biofortification of eggs and pork with vitamin D as a means of increasing dietary supply'. The FASEB Journal, 29 (1 Supplement).  
Hayes, A, O'Grady, M, Duffy, S, Seamans, K, Kerry, J, Kelly, Alan, Jakobsen, Jakob, O'Doherty, J, Cashman, KD (2015) 'The vitamin D content and consumer acceptability of vitamin D biofortified eggs'. Proceedings of the Nutrition Society, 74 (OCE4).  
Randi, Federico, Fernandez-Fuertes, Beatriz, McDonald, Michael, Forde, Niamh, Kelly, Alan K, Amorin, Habner Bastos, de Lima, Eduardo Muniz, Morotti, Fabio, Seneda, Marcelo Marcondes, Lonergan, Patrick (2015) 'Asynchronous embryo transfer as a tool to understand embryo?uterine interaction in cattle: is a large conceptus a good thing?'. Reproduction, Fertility and Development .  
Keogh K, Waters SM, Kelly AK, Wylie AR, Sauerwein H, Sweeney T, Kenny DA (2015) 'Feed restriction and realimentation in Holstein-Friesian bulls: II. Effect on blood pressure and systemic concentrations of metabolites and metabolic hormones'. Animal Science, 93 (7):3590-3601.  
Dr Kate Killick
Casey ME, Meade KG;Nalpas NC;Taraktsoglou M;Browne JA;Killick KE;Park SD;Gormley E;Hokamp K;Magee DA;MacHugh DE (2015) 'Analysis of the Bovine Monocyte-Derived Macrophage Response to Mycobacterium avium Subspecies Paratuberculosis Infection Using RNA-seq'. Frontiers in Immunology, 6 .  
Rue-Albrecht K, Magee DA;Killick KE;Nalpas NC;Gordon SV;MacHugh DE (2014) 'Comparative functional genomics and the bovine macrophage response to strains of the mycobacterium genus'. Frontiers in Immunology, 5 .  
Killick KE, Magee DA, Park SD, Taraktsoglou M, Browne JA, Conlon KM, Nalpas NC, Gormley E, Gordon SV, MacHugh DE, Hokamp K (2014) 'Key Hub and Bottleneck Genes Differentiate the Macrophage Response to Virulent and Attenuated Mycobacterium bovis'. Frontiers in immunology, 5 .  
Dr Doris Laepple
Läpple, D., Renwick, A. and Thorne, F. (2015) 'Measuring and Understanding the Drivers of Agricultural Innovation: Evidence from Ireland'. Food Policy .  
Läpple, D. and Kelley. H. (2015) 'Spatial Dependence in the Adoption of Organic Drystock Farming in Ireland'. European Review of Agricultural Economics .  
Professor Patrick Lonergan
Maillo V, Ó Gaora P, Forde N, Besenfelder U, Havlicek V, Burns GW, Spencer TE, Gutierrez-Adan A, Lonergan P, Rizos D (2015) 'Oviduct-Embryo Interactions in Cattle: Two-Way Traffic or a One-Way Street?'. Biology of Reproduction, 92 (6).  
Parr MH, Crowe MA;Lonergan P;Evans AC;Fair T;Diskin MG (2015) 'The concurrent and carry over effects of long term changes in energy intake before insemination on pregnancy per artificial insemination in heifers'. Animal Reproduction Science, 157 :87-94.  
Jimenez-Krassel F, Scheetz DM;Neuder LM;Ireland JL;Pursley JR;Smith GW;Tempelman RJ;Ferris T;Roudebush WE;Mossa F;Lonergan P;Evans AC;Ireland JJ (2015) 'Concentration of anti-Mullerian hormone in dairy heifers is positively associated with productive herd life'. Journal of Dairy Science, 98 (5):3036-3045.  
Scully, S. and Evans, A.C.O. and Carter, F. and Duffy, P. and Lonergan, P. and Crowe, M.A. (2015) 'Ultrasound monitoring of blood flow and echotexture of the corpus luteum and uterus during early pregnancy of beef heifers'. Theriogenology, 83 (3):449-458. Available Online  
Professor James Lyng
Aguilo-Aguayo, I; Suarez, M; Plaza, L; Hossain, MB; Brunton, N; Lyng, JG; Rai, DK (2015) 'Optimization of pulsed electric field pre-treatments to enhance health-promoting glucosinolates in broccoli flowers and stalk'. Journal of the Science of Food and Agriculture, 95 (9):1868-1875.  
Cregenzán, Alberti, O; Halpin, RM; Whyte, P; Lyng, JG; Noci F (2015) 'Study of the suitability of the central composite design to predict the inactivation kinetics by pulsed electric fields (PEF) in Escherichia coli, Staphylococcus aureus and Pseudomonas fluorescens in milk'. Food and Bioproducts Processing: Part C, 95 :313-322.  
Arroyo, C; Eslami, S; Brunton, NP; Arimi, JM; Noci, F; Lyng, JG (2015) 'An assessment of the impact of pulsed electric fields processing factors on oxidation, color, texture, and sensory attributes of turkey breast meat'. Poultry Science, 94 (5):1088-1095.  
Hossain, MB; Aguilo-Aguayo, I; Lyng, JG; Brunton, NP; Rai, DK (2015) 'Effect of pulsed electric field and pulsed light pre-treatment on the extraction of steroidal alkaloids from potato peels'. Innovative Food Science and Emerging Technologies, 29 :9-14.  
Ignat, A; Manzocco, L; Brunton, NP; Nicoli, MC; Lyng, JG (2015) 'The effect of pulsed electric field pre-treatments prior to deep-fat frying on quality aspects of potato fries'. Innovative Food Science and Emerging Technologies, 29 :65-69.  
Arroyo, C; Lascorz, D; O'Dowd, L; Noci, F; Arimi, J Lyng, JG (2015) 'Effect of Pulsed Electric Field treatments at various stages during conditioning on quality attributes of beef longissimus thoracis et lumborum muscle'. Meat Science, 99 :52-59.  
McDonnell, CK; Allen, P; Chardonnereau, FS; Lyng, JG (2014) 'The use of pulsed electric fields for accelerating the salting of pork'. Lwt-Food Science and Technology, 59 (2):1054-1060.  
McDonnell, CK; Lyng, JG; Arimi, JM; Allen, P (2014) 'The acceleration of pork curing by power ultrasound: A pilot-scale production'. Innovative Food Science and Emerging Technologies, 26 :191-198.  
Aguilo-Aguayo, I., Suarez, M., Plaza, L., Hossain, M. B., Brunton, N., Lyng, J. G., Rai, D. K. (2014) 'Optimization of pulsed electric field pre-treatments to enhance health-promoting glucosinolates in broccoli flowers and stalk'. Journal of the Science of Food and Agriculture .  
Grasso, S. Brunton, N.P., Lyng, J.G., Lalor, F. and Monahan, F.J. (2014) 'Healthy processed meat products regulatory, reformulation and consumer challenges'. Trends in Food Science & Technology, 39 (1):4-17.  
Aguilo-Aguayo, I; Downey, G; Keenan, DF; Lyng, JG; Brunton, N; Rai, DK (2014) 'Observations on the water distribution and extractable sugar content in carrot slices after pulsed electric field treatment'. Food Research International, 64 :18-24.  
McDonnell, CK; Lyng, JG; Allen, P. (2014) 'The use of power ultrasound for accelerating the curing of pork'. Meat Science, 98 (2):142-149.  
Professor David MacHugh
Moran, B., Butler, S. T., Moore, S. G., MacHugh, D. E., Creevey, C. J. (2015) 'Differential gene expression in the endometrium reveals cytoskeletal and immunological genes in lactating dairy cows genetically divergent for fertility traits'. Reproduction, Fertility and Development, [Online early] .  
Farrell, D., Shaughnessy, R. G., Britton, L., MacHugh, D. E., Markey, B., Gordon, S. V. (2015) 'The identification of circulating miRNA in bovine serum and their potential as novel biomarkers of early Mycobacterium avium subsp paratuberculosis infection'. PLoS ONE, 10 (7). Available Online  
O'Doherty, A. M., MacHugh, D. E., Spillane, C., Magee, D. A. (2015) 'Genomic imprinting effects on complex traits in domesticated animal species'. Frontiers in Genetics, 6:156 . Available Online  
Casey, M. E., Meade, K. G., Nalpas, N. C., Taraktsoglou, M., Browne, J. A., Killick, K. E., Park, S. D. E., Gormley, E., Hokamp, K., Magee, D. A., MacHugh, D. E. (2015) 'Analysis of the bovine monocyte-derived macrophage response to Mycobacterium avium subspecies paratuberculosis infection using RNA-seq'. Frontiers in Immunology, 6:23 . Available Online  
Vegh, P., Magee, D. A., Nalpas, N. C., Bryan, K., McCabe, M. S., Browne, J. A., Conlon, K. M., Gordon, S. V., Bradley, D. G., MacHugh, D. E., Lynn, D. J. (2015) 'MicroRNA profiling of the bovine alveolar macrophage response to Mycobacterium bovis infection suggests pathogen survival is enhanced by microRNA regulation of endocytosis and lysosome trafficking'. Tuberculosis, 95 (1):60-67. Available Online  
Schubert, M., Jonsson, H., Chang, D., Der Sarkissian, C., Ermini, L., Ginolhac, A., Albrechtsen, A., Dupanloup, I., Foucal, A., Petersen, B., Fumagalli, M., Raghavan, M., Seguin-Orlando, A., Korneliussen, T. S., Velazquez, A. M., Stenderup, J., Hoover, C. A., Rubin, C. J., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A., MacHugh, D. E., Kalbfleisch, T., MacLeod, J. N., Rubin, E. M., Sicheritz-Ponten, T., Andersson, L., Hofreiter, M., Marques-Bonet, T., Gilbert, M. T., Nielsen, R., Excoffier, L., Willerslev, E., Shapiro, B., Orlando, L. (2014) 'Prehistoric genomes reveal the genetic foundation and cost of horse domestication'. Proceedings of the National Academy of Sciences USA, 111 (52):5661-9.  
Sanderson, N. D., Norman, P. J., Guethlein, L. A., Ellis, S. A., Williams, C., Breen, M., Park, S. D., Magee, D. A., Babrzadeh, F., Warry, A., Watson, M., Bradley, D. G., MacHugh, D. E., Parham, P., Hammond, J. A. (2014) 'Definition of the cattle killer cell Ig-like receptor gene family: comparison with aurochs and human counterparts'. Journal of Immunology, 193 (12):6016-6030.  
Rue-Albrecht, K., Magee, D. A., Killick, K. E., Nalpas, N. C., Gordon, S. V., MacHugh, D. E. (2014) 'Comparative functional genomics and the bovine macrophage response to strains of the Mycobacterium genus'. Frontiers in Immunology, 5:536 . Available Online  
Killick, K. E., Magee, D. A., Park, S. D., Taraktsoglou, M., Browne, J. A., Conlon, K. M., Nalpas, N. C., Gormley, E., Gordon, S. V., MacHugh, D. E., Hokamp, K. (2014) 'Key hub and bottleneck genes differentiate the macrophage response to virulent and attenuated Mycobacterium bovis'. Frontiers in Immunology, 5:422 . Available Online  
Dr Kevin McDonnell
Sosa A., Acuna M, McDonnell K Devlin G (2015) 'Managing the moisture content of wood biomass for the optimisation of Ireland's transport supply strategy to bioenergy markets and competing industries'. Energy, 86 :354-368.  
Mac anBhaird, Hemmingway P, Walsh E, Maglinao A, Carpareda S, McDonnell K.P. (2015) 'Bubbling fluidised bed gasification of what straw-gasifier performance using mulllite as bed material'. Chemical Engineering Research and Design, 97 :36-44.  
Sosa, A. and Acuna, M. and McDonnell, K. and Devlin, G. (2015) 'Controlling moisture content and truck configurations to model and optimise biomass supply chain logistics in Ireland'. Applied Energy, 137 :338-351. Available Online  
O'Flynn, M.G. and Finnan, J.M. and Curley, E.M. and McDonnell, K.P. (2015) 'Annually repeated traffic in delayed Miscanthusÿgiganteus harvests; effects on crop response and mitigation measures'. Soil and Tillage Research, 148 :133-141. Available Online  
Gillespie, G.D. and Everard, C.D. and McDonnell, K.P. (2015) 'Prediction of biomass pellet quality indices using near infrared spectroscopy'. Energy, 80 :582-588. Available Online  
Murphy F., Devlin G, McDonnell K (2015) 'Benchmarking environmental impacts of peat use for electricity generation in Ireland-A life cycle assessment'. Sustainability Journal, 7 (6):6376-6393.  
Murphy, F., Devlin, G., McDonnell, K. (2015) 'Greenhouse gas and energy based life cycle analysis of products from the Irish wood processing industry'. Journal of Cleaner Production .  
Dr Paul McGettigan
Anna E. Zielak-Steciwko, John A. Browne, Paul A. McGettigan, Malgorzata Gajewska, Michal Dzieciol, Tadeusz Szulc and Alexander C.O. Evans (2014) 'microRNAs expression and their target genes/pathways associated with bovine ovarian follicle development'. Physiological genomics .  
Alan M. O’Doherty and Paul A. McGettigan (2014) 'Epigenetic processes in the male germline'. Reproduction Fertility and Development . Available Online  
Tharmalingam T, Walsh SW, McGettigan PA, Potter O, Struwe WB, Evans ACO, Rudd PM, and Carrington SD (2014) 'N-glycan profiling of bovine follicular fluid at key dominant follicle developmental stages'. Reproduction .  
Dr Barry John McMahon
McMahon, BJ, Wall, PG, Fanning, S & Fahey F (2015) 'Targets to increase food production: One Health implications'. Infection Ecology & Epidemiology .  
Ó hUallacháin, D., Copland, A.S., Buckley, K. & McMahon, B.J. (2015) 'Opportunities within the revised EU Common Agricultural Policy to address the decline of farmland birds: An Irish perspective'. Diversity, 7 :307-317. Available Online  
Stritch, C., Naulty, F., Zintl, A., Callanan, J.J, McCullagh, M., Deane, D., Marnell, F. & McMahon, B.J. (2015) 'Squirrelpox virus reservoir expansion on the east coast of Ireland'. European Journal of Wildlife Research, (61):483-486.  
Burke, B.J, Finn, A., Flanagan, D.T., Fogarty, D.M., Foran, M., O’Sullivan, J.D., Smith, S.A., John D. C. Linnell, J.D.C. & McMahon, B.J. (2014) 'Reintroduction of white-tailed eagles to the Republic of Ireland: A case study of media coverage'. Irish Geography, 47 (1):95-115. Available Online  
McMahon, B.J., Teeling, E.C. & Höglund, J (2014) 'How and why should we implement genomics into conservation?'. Evolutionary Applications, 7 :999-1007.  
Dr Breige McNulty
O'Brien, S. A., Livingstone, M. B., McNulty, B. A., Lyons, J., Walton, J., Flynn, A., Segurado, R., Dean, M., Spence, M., McCaffrey, T. A., Pourshahidi, L. K., Nugent, A. P., Gibney, E. R. (2015) 'Secular trends in reported portion size of food and beverages consumed by Irish adults'. Br J Nutr, 113 (7):1148-57.  
O'Donovan, C. B., Walsh, M. C., Nugent, A. P., McNulty, B., Walton, J., Flynn, A., Gibney, M. J., Gibney, E. R., Brennan, L. (2015) 'Use of metabotyping for the delivery of personalised nutrition'. Mol Nutr Food Res, 59 (3):377-85.  
O'Donovan, C.B. and Walsh, M.C. and Nugent, A.P. and Mcnulty, B. and Walton, J. and Flynn, A. and Gibney, M.J. and Gibney, E.R. and Brennan, L. (2015) 'Use of metabotyping for the delivery of personalised nutrition'. Molecular Nutrition and Food Research . Available Online  
Lindsay KL, Heneghan C, McNulty B, Brennan L, McAuliffe FM (2015) 'Lifestyle and dietary habits of an obese pregnant cohort'. Maternal and Child Health Journal, 19 (1):25-32.  
Zhao, Y., Monahan, F. J., McNulty, B. A., Gibney, M. J., Gibney, E. R. (2014) 'Effect of vitamin E intake from food and supplement sources on plasma alpha- and gamma-tocopherol concentrations in a healthy Irish adult population'. Br J Nutr, 112 (9):1575-85.  
Boylan EA, McNulty BA, Walton J, Flynn A, Nugent AP, Gibney MJ (2014) 'The prevalence and trends in overweight and obesity in Irish adults between 1990 and 2011'. Public Health, 17 (11):2389-2397.  
Dr Raul Miranda Caso Luengo
Coulson, GB; Miranda-CasoLuengo, AA; Miranda-CasoLuengo, R; Wang, X; Oliver, J; Willingham-Lane JM; Meijer, WG; Hondalus, MK (2015) 'Transcriptome reprogramming by plasmid encoded transcriptional regulators is required for host-niche adaptation of a macrophage pathogen'. Infection and Immunity, 83 (8):3137-3145.  
Babatunde, AO; Miranda-CasoLuengo, R; Imtiaz, M; Zhao, YQ; Meijer, WG (2015) 'Performance assessment and microbial diversity of two pilot scale multi-stage sub-surface flow constructed wetland systems'. Journal of Environmental Sciences .  
Dr Aleksandra Miranda-Caso Luengo
Coulson GB, Miranda-CasoLuengo AA;Miranda-CasoLuengo R;Wang X;Oliver J;Willingham-Lane JM;Meijer WG;Hondalus MK (2015) 'Transcriptome reprogramming by plasmid-encoded transcriptional regulators is required for host niche adaption of a macrophage pathogen'. Infection and Immunity, 83 (8):3137-3145.  
Professor Frank Monahan
Zazzo A., Cerling T.E., Ehleringer J.R., Moloney A., Monahan F.J., Schmidt O. (2015) 'Isotopic composition of sheep wool records seasonality of climate and diet'. Rapid Communications in Mass Spectrometry, 29 (15):1357-1369. Available Online  
Grasso, S. Brunton, N.P., Lyng, J.G., Lalor, F. and Monahan, F.J. (2014) 'Healthy processed meat products regulatory, reformulation and consumer challenges'. Trends in Food Science & Technology, 39 (1):4-17.  
Dr Barbara Murphy
Murphy BA, Blake CM, Brown JA, Martin AM, Forde N, Sweeney LM, Evans AC (2015) 'Evidence of a molecular clock in the ovine ovary and the influence of photoperio'. Theriogenelogy .  
Dr Paul Murphy
Fenton O, Ibrahim TG, Murphy PNC, Sherriff SC, Vero S & Ó hUallacháin D (2015) 'Consequences of using different soil texture determination methodologies for soil physical quality and unsaturated zone time lag estimates'. Journal of Contaminant Hydrology .  
Buckley C, Wall DP, Moran B, O’Neill S, Murphy PNC (2015) 'Developing the EU Farm Accountancy Data Network to derive indicators around the sustainable use of nitrogen and phosphorus at farm level'. Nutrient Cycling in Agroecosystems, 102 :319-333.  
Murphy PNC, Mellander P-E, Melland AR, Buckley, C, Shore M, Shortle G, Wall DP, Treacy, M. Shine, O., Mechan, S & Jordan P (2015) 'Variable response to phosphorus mitigation measures across the nutrient transfer continuum in a dairy grassland catchment'. Agriculture, Ecosystems and Environment, 207 :192-202.  
Mihailescu E, Ryan W, Murphy PNC, Casey IA & Humphreys J (2015) 'Economic impacts of nitrogen and phosphorus use efficiency on nineteen intensive grass-based dairy farms in the South of Ireland'. Agricultural Systems, 132 :121-132.  
Dr Favel Naulty
Stritch, C., Naulty, F., Zintl, A., Callanan, J.J, McCullagh, M., Deane, D., Marnell, F. & McMahon, B.J. (2015) 'Squirrelpox virus reservoir expansion on the east coast of Ireland'. European Journal of Wildlife Research, (61):483-486.  
Dr Aine Ni Dhubhain
Upton, V., Ryan, M., O’Donoghue, C. & Ní Dhubháin, Á, `(2015) 'Combining conventional and volunteered geographic information to identify and explore recreational resources'. Applied Geography, 60 :69-76.  
Purser, P., Ó’Tuama, P., Vítková, L and Ní Dhubháin, Á (2015) 'Factors affecting the economic assessment of continuous cover forestry compared with rotation based management'. Irish Forestry .  
Professor Maarten Nieuwenhuis
Meijer S, Catacutan D, Sileshi G and Nieuwenhuis M (2015) 'Tree planting by smallholder farmers in Malawi: using the theory of planned behaviour to examine the relationship between attitudes and behaviour'. Journal of Environmental Psychology, 43 :1-12.  
Mengesha T, Hawkins M, Tarleton M and Nieuwenhuis M (2015) 'Stem quality assessment using terrestrial laser scanning technology: a case study of ash trees with a range of defects in two stands in Ireland'. SCANDINAVIAN JOURNAL OF FOREST RESEARCH, 30 (7):605-616.  
Meijer, S.S., Seleshi, G.W., Kundhlande, G., Catacutan, D. and Nieuwenhuis, M. (2015) 'The role of gender and kinship structure in household decision making for agriculture and tree planting in Malawi'. Journal of Gender, Agriculture and Food Security, 1 (1):51-72.  
Meijer, S.S. and Catacutan, D. and Ajayi, O.C. and Sileshi, G.W. and Nieuwenhuis, M. (2015) 'The role of knowledge, attitudes and perceptions in the uptake of agricultural and agroforestry innovations among smallholder farmers in sub-Saharan Africa'. International Journal of Agricultural Sustainability, 13 (1):40-54. Available Online  
Mengesha, T., Hawkins, M. and Nieuwenhuis, M. (2014) 'The impact of plot numbers and plot configuration on the accuracy of pre-harvest stand estimates obtained by terrestrial laser scanning'. Irish Forestry, 71 (1&2):7-26.  
Gardiner J. J. and Nieuwenhuis, M. (2014) 'Celebrating 100 years of Forestry education in UCD'. Irish Forestry, 71 (1&2):144-161.  
Liu, Y. and Nieuwenhuis, M. (2014) 'An analysis of habitat-use patterns of fallow and sika deer based on culling data from two estates in Co. Wicklow'. Irish Forestry, 71 (1&2):27-39.  
McMullin S, Nieuwenhuis M and Jamnadass R (2014) 'Strategies for sustainable supply of and trade in threatened medicinal tree species: A case study of genus Warburgia'. Ethnobotany Research and Applications, 12 :671-683.  
Mengesha, T., Hawkins, M. and Nieuwenhuis, M. (2014) 'Validation of terrestrial laser scanning data using conventional forest inventory methods'. European Journal Forest Research, (134):211-222.  
Meijer, S., Sileshi, G., Catacutan, D. and Nieuwenhuis, M. (2014) 'Attitudes and behaviour towards on-farm tree planting among smallholder farmers in Malawi'. International Forestry Review (Commonwealth Forestry Association), 16 (5):65-66.  
Dr Anne Nugent
Rice N, Gibbons H, McNulty BA, Walton J, Flynn A, Gibney MJ, Nugent AP. (2015) 'Development and validation testing of a short nutrition questionnaire to identify dietary risk factors in preschoolers aged 12-36 months'. Food and Nutrition Research, 59 .  
Hopkins SM, Gibney MJ, Nugent AP, McNulty HM, Molloy AM, Scott JM, Flynn A, Strain JJ, Ward M, Walton J & McNulty BA (2015) 'Imapct of voluntary fortification and supplement use on dietary intakes and biomarker status of folate and vitamin B-12 in Irish adults'. American Journal of Clinical Nutrition, 101 (6):1163-1172.  
O'Brien SA; Livingstone MB; McNulty BA; Lyons J; Walton J; Flynn A; Segurado R; Dean M; Spence M; McCaffrey TA; Pourshahidi LK; Nugent AP; Gibney ER (2015) 'Secular trends in reported portion size of food and beverages consumed by Irish adults'. British Journal of Nutrition, 113 (7):1148-1157.  
O'Donovan, C. B., Walsh, M. C., Nugent, A. P., McNulty, B., Walton, J., Flynn, A., Gibney, M. J., Gibney, E. R., Brennan, L. (2015) 'Use of metabotyping for the delivery of personalised nutrition'. Mol Nutr Food Res, 59 (3):377-85.  
Boylan EA, McNulty BA, Walton J, Flynn A, Nugent AP, Gibney MJ (2014) 'The prevalence and trends in overweight and obesity in Irish adults between 1990 and 2011'. Public Health, 17 (11):2389-2397.  
Tarrant RC, Nugent M, Nugent AP, Queally JM, Moore DP, Kiely PJ. (2014) 'Anthropometric characteristics, high prevalence of undernutrition and weight loss: impact on outcomes in patients with adolescent idiopathic scoliosis after spinal fusion'. European Spine Journal, 29 .  
Dr Alan O'Doherty
O'Doherty A.M., MacHugh D.E., Spillane C. and Magee D.A. (2015) 'Genomic imprinting effects on complex traits in domesticated animal species'. Frontiers in genetics . Available Online  
O'Doherty A.M., Magee D.A., O'Shea L.C., Forde N., Beltman M.E., Mamo S. and Fair T. (2015) 'DNA methylation dynamics at imprinted genes during bovine pre-implantation embryo development'. BMC Developmental Biology, 15 (13).  
O'Doherty A; D Magee; LC O'Shea; N Forde; M Beltman; S Mamo; T Fair. (2015) 'Stabilisation of bovine DNA methylation imprints occurs post blastocyst formation'. BMC Developmental Biology .  
Professor John O'Doherty
Mukhopadhya, Anindya and Noronha, Nessa and Bahar, Bojlul and Ryan, Marion T and Murray, BA and Kelly, PM and O'Loughlin, IB and O'doherty, John V and Sweeney, T (2015) 'The anti-inflammatory potential of a moderately hydrolysed casein and its 5 kDa fraction in in vitro and ex vivo models of the gastrointestinal tract'. Food Chemistry, 6 (2):612-621.  
Heim, G and O'Doherty, JV and O'Shea, CJ and Doyle, DN and Egan, AM and Thornton, K and Sweeney, T (2015) 'Maternal supplementation of seaweed-derived polysaccharides improves intestinal health and immune status of suckling piglets'. Journal of nutritional science, 4 .  
Allsopp, Philip and Crowe, William and Bahar, Bojlul and Harnedy, P\'adraig\'\in A and Brown, Emma S and Taylor, Sonja S and Smyth, Thomas J and Soler-Vila, Anna and Magee, Pamela J and Gill, Chris IR and others (2015) 'The effect of consuming Palmaria palmata-enriched bread on inflammatory markers, antioxidant status, lipid profile and thyroid function in a randomised placebo-controlled intervention trial in healthy adults'. European Journal of Nutrition, :1-12.  
Cashman, Kevin and Duffy, Sarah and Hayes, Aoife and Seamans, Kelly and Kerry, Joe and Kelly, Alan and Jakobsen, Jette and O'Doherty, John (2015) 'Biofortification of eggs and pork with vitamin D as a means of increasing dietary supply'. The FASEB Journal, 29 (1 Supplement):758-13.  
Heim, G and Sweeney, T and O'Shea, CJ and Doyle, DN and O?Doherty, JV (2015) 'Effect of maternal dietary supplementation of laminarin and fucoidan, independently or in combination, on pig growth performance and aspects of intestinal health'. Animal Feed Science and Technology, 204 :28-41.  
Hayes, A and O'Grady, M and Duffy, S and Seamans, K and Kerry, J and Kelly, Alan and Jakobsen, Jakob and O'Doherty, J and Cashman, KD (2015) 'The vitamin D content and consumer acceptability of vitamin D biofortified eggs'. Proceedings of the Nutrition Society, 74 (OCE4).  
Moroney, NC and O'Grady, MN and Robertson, RC and Stanton, C and O'Doherty, JV and Kerry, JP (2015) 'Influence of level and duration of feeding polysaccharide (laminarin and fucoidan) extracts from brown seaweed (Laminaria digitata) on quality indices of fresh pork'. Meat science, 99 :132-141.  
Dr Conor O'Reilly
Glombik, P.; O’Reilly, C.; Grant, O.M. (2015) 'Early-height variation between full-sibling families of Sitka spruce growing in Ireland'. Irish Forestry .  
O’Reilly, C., Phillips, H. and Thompson, D. (2014) 'Cost-benefit analysis of tree improvement in Ireland'. Irish Forestry, 71 :113-131.  
Professor Dolores O'Riordan
Hutchings, S., O'Sullivan, M., Jacquier, JC. O'Riordan, (2015) 'The effect of inhomogeneous quinine and hydrocolloid distributions on the bitterness of model gels'. Food Quality and Preference, 45 :132-139.  
O'Neill, Jacquier, JC, O'Sullivan, M, and O'Riordan, D. (2015) 'Kinetics of immobilization and release of tryptophan, riboflavin and peptides from whey protein microbeads'. Food Chemistry, 180 :150-155.  
J. Newman, D. O'Riordan, J.C. Jacquier and M. O'Sullivan (2014) 'Development of a Sensory Lexicon for Dairy Protein Hydrolysates'. Journal of Sensory Studies, 29 (6):413-424.  
Dr Sharon O'Rourke
S.M. O'Rourke, D.A. Angers, N.M. Holden, A.B. McBratney (2015) 'Soil organic carbon across scales'. Global Change Biology, 21 (10):3561-3574. Available Online  
Askari, M.S. and Cui, J. and O'Rourke, S.M. and Holden, N.M. (2015) 'Evaluation of soil structural quality using VIS-NIR spectra'. Soil and Tillage Research, 146 (PA):108-117. Available Online  
Askari M.S., O'Rourke S.M., Holden N.M. (2015) 'Evaluation of soil quality for agricultural production using visible-near-infrared spectroscopy'. Geoderma, 80 (91):243-244.  
Dr Lynne O'Shea
LC O'Shea (2015) 'Detecting a bad egg. VISIONS: The art of science'. Molecular Reproduction and Development .  
O'Doherty A; D Magee; LC O'Shea; N Forde; M Beltman; S Mamo; T Fair. (2015) 'Stabilisation of bovine DNA methylation imprints occurs post blastocyst formation'. BMC Developmental Biology .  
Dr Aifric O'Sullivan
Goldsmith F, O'Sullivan A, Smilowitz JT, Freeman SL (2015) 'Lactation and Intestinal Microbiota: How Early Diet Shapes the Infant Gut'. Journal of Mammary Gland Biology and Neoplasia, EPub .  
Mr Mick O'Sullivan
O'Neill, G.J. and Egan, T. and Jacquier, J.C. and O'Sullivan, M. and Dolores O'Riordan, E. (2015) 'Kinetics of immobilisation and release of tryptophan, riboflavin and peptides from whey protein microbeads'. Food Chemistry, 180 :150-155. Available Online  
Hutchings, S., O'Sullivan, M., Jacquier, JC. O'Riordan, (2015) 'The effect of inhomogeneous quinine and hydrocolloid distributions on the bitterness of model gels'. Food Quality and Preference, 45 :132-139.  
J. Newman, D. O'Riordan, J.C. Jacquier and M. O'Sullivan (2014) 'Development of a Sensory Lexicon for Dairy Protein Hydrolysates'. Journal of Sensory Studies, 29 (6):413-424.  
Dr Karina Pierce
McCarthy, J. and Delaby, L. and Hennessy, D. and McCarthy, B. and Ryan, W. and Pierce, K. M. and Brennan, A. and Horan, B. (2015) 'The effect of stocking rate on soil solution nitrate concentrations beneath a free-draining dairy production system in Ireland'. JOURNAL OF DAIRY SCIENCE, 98 (6):4211-4224.  
McDonald, R. and Heanue, K. and Pierce, K. and Horan, B. (2015) 'Factors Influencing New Entrant Dairy Farmer's Decision-making Process around Technology Adoption'. Journal of Agricultural Education and Extension . Available Online  
Whelan, S.J, Mulligan, F.J, Gath, V. and Pierce K.M (2014) 'Effect of dietary manipulation of crude protein content and non fibrous to fibrous carbohydrate ratio on energy balance in early lactation dairy cows'. Journal of Dairy Science .  
Professor Alan Renwick
Läpple, D. and Renwick, A. and Thorne, F. (2015) 'Measuring and understanding the drivers of agricultural innovation: Evidence from Ireland'. Food Policy, 51 :1-8. Available Online  
Laepple, D., Renwick, A. and Thorne, F. (2015) 'Measuring and Understanding the Drivers of Agricultural Innovation: Evidence from Ireland'. Food Policy .  
Dr Miriam Ryan
O'Gorman A, Morris C, Ryan M, O'Grada CM, Roche HM, Gibney ER, Gibney MJ, Brennan L (2014) 'Habitual dietary intake impacts on the lipidomic profile'. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 966 :140-146.  
Dr Olaf Schmidt
Zazzo A., Cerling T.E., Ehleringer J.R., Moloney A., Monahan F.J., Schmidt O. (2015) 'Isotopic composition of sheep wool records seasonality of climate and diet'. Rapid Communications in Mass Spectrometry, 29 (15):1357-1369. Available Online  
Andriuzzi WS, Pulleman MM, Schmidt O, Faber JH, Brussaard L (2015) 'Anecic earthworms (Lumbricus terrestris) alleviate negative effects of extreme rainfall events on soil and plants in field mesocosms'. Plant and Soil . Available Online  
Griffin M, Hogan B, Schmidt O (2015) 'Silicon reduces slug feeding on wheat seedlings'. Journal of Pest Science, 88 (1):17-24. Available Online  
Hazard C, Boots B, Keith AM, Mitchell DT, Schmidt O, Doohan FM and Bending GD (2014) 'Temporal variation outweighs effects of biosolids applications in shaping arbuscular mycorrhizal fungi communities on plants grown in pasture and arable soils'. Applied Soil Ecology, 82 :52-60. Available Online  
Dr Helen Sheridan
T. Moloney, E. G. O'Riordan, H. Sheridan and P. O'Kiely (2015) 'The effects of defoliating grass in winter or spring on herbage yields and ensilage characteristics'. Grass and Forage Science .  
Dr David Stead
Stead, D. R. (2014) 'Irish agriculture and agricultural policy during the hot, dry summer of 1976'. Agricultural History Review, 62 (2):337-359.  
Dr Saoirse Tracy
Daly KR, Mooney SJ, Bennett MJ, Crout N, Roose T, Tracy SR. (2015) 'Assessing the influence of the rhizosphere on soil hydraulic properties using X-ray micro Computed Tomography'. Journal of Experimental Botany, 66 (8):2305-2314.  
Tracy SR, Daly KR, Sturrock CJ, Crout N, Mooney SJ, Roose T. (2015) 'Quantifying the 3-D change in water distribution in soil micro-structure across a range of matric potentials using X-ray Computed Tomography and image based homogenization'. Water Resources Research, 51 (2):1006-1022.  
Tracy SR, Black CR, Roberts JA, Dodd IC, Mooney SJ. (2015) 'Using X-ray Computed Tomography to explore the role of abscisic acid in moderating the impact of soil compaction on root system architecture'. Environmental and Experimental Botany, 110 :11-18.  
Dr Eilín �Walsh
Seán T. Mac an Bhaird, Phil Hemmingway, Eilín Walsh, Amado L. Maglinao, Sergio C. Capareda, Kevin P. McDonnell (2015) 'Bubbling fluidised bed gasification of wheat straw - gasifier performance using mullite as bed material'. Chemical Engineering Research and Design, 97 :36-44.  
Dr Pádraig Wims
Deegan, D., Wims, P. & Pettit, T (2015) 'Practical Skills Training in Agricultural Education - A Comparison between Traditional and Blended Approaches'. The Journal of Agricultural Education and Extension .  
Wims, P; Byrne, C. (2015) 'Irish farmers' use of ICTs and their preferences for engagement with extension'. Journal of Extension Systems, 31 (1):91-102.  
Deegan, D., Wims, P. and Pettit, T (2014) 'Potential of Tablet-PCs in agricultural education'. Journal of Extension Systems, 30 (2):93-104.  

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Other Journals
Dr Angela Feechan
Milbourne, D., Spink, J., Barth, S., Mullins, E., Griffin, D., Wall, D., Carroll, J., Doohan, F., Ng, C., McCabe, P.F., Feechan, A., Spillane, C., Sulpice, R., Wellmer, F., Graciet, E. (2015) 'A virtual centre for crop improvement: Boosting plant breeding to secure agicultural productivity in Ireland' Teagasc Research, 10 (1):26-27.  
Dr Lynne O'Shea
LC O'Shea and EV Mocanu. (2015) 'Stopping the biological clock - who benefits?' Irish Medical Journal .  

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Conference Publications
Dr James Breen
Chiodi A, Breen J, Donnellan T, Gargiulo M, Deane P, Ó Gallachóir BP (2014) Land-use competition between energy and food. The case of climate change mitigation in Ireland 14th IAEE European Energy Conference, LUISS University of Rome,  
Dr Caroline Elliott-Kingston
A.Hunter, C.Elliott-Kingston (2015) Teaching and assessment strategies for active student learning in university horticultural education International Horticultural Congress,  
A.Hunter, M.Forrest, C.Elliott-Kingston, L.Murphy (2015) Introducing landscape design techniques to horticulture students International Horticultural Congress,  
Elliott-Kingston C. Doyle OPE. Hunter A. (2015) Benefits of scenario-based learning in university education International Horticultural Congress,  
Professor Alexander Evans
Hobbs,LHC, Stockmann,H, Adamczyk,V, Rudd,PM , Evans,ACO, Carrington, SD,Williams, EJ. (2014) Postpartum uterine disease in cattle is associated with increased fucosylation of Immunoglobulin G European Society for Domestic Animal Reproduction Annual Conference,  
Dr Margherita Gioria
Gioria, M; Osborne BA (2014) Taking advantage of a window of opportunity: the significance of early establishment and growth of invasive plant species 8th European Conference on Biological Invasions: NEOBIOTA 2014,  
Gioria, M; Pysek, P (2014) Comparative assessment of the soil seed bank of invasive and non-invasive congeners in their native and alien range 8th European Conference on Biological Invasions: NEOBIOTA 2014,  
Dr Niamh Harbourne
Giallourou, N; Harbourne, N; Swann, J (2014) Effects of domestic processing on the glucosinolate content of watercress Glucosinolates and beyond,  
Dr Aideen McKevitt
A. J. O'Sullivan, M. J. Gibney and A. I. McKevitt (2014) Use of dietary exposure modelling to estimate the intake of artificial sweeteners by young children with medical conditions Nutrition Society, Irish Section Meeting, E47 - E47  
Dr Barry John McMahon
Kenny, K. Copland A.S., McMahon, B.J. (2015) Timing of Mowing for the Conservation of Whinchat (Saxicola rubetra) in Ireland Proceedings of the 1st European Whinchat Symposium: Living on the edge of extinction in Europe, Helmbrechts, Germany, 227 - 232  
McMahon, B.J., Arent, Z, Palmer, M.V., Gilmore, C., McDevitt, A.D., Regan, S., Fanning, S, Yearsley, J. & Nally, JE. (2015) An invasive mammalian species bearing unwanted gifts: One Health implications 3rd International One Health Congress, Amsterdam, The Netherlands,  
Professor Frank Monahan
Moloney A.P., McGee M., O'Riordan E, Marren, D., Mezgebo, G., Monahan, F.J, Richardson, R.I. (2015) The influence of grazing prior to finishing on a high concentrate ration, on the colour and sensory characteristics of muscle from early or late maturing bulls slaughtered at the same carcass weight 68th Reciprocal Meat Conference, Lincoln, Nebraska, U.S, 31 - 32 Available Online  
Moloney A.P., Monahan F.J. and Schmidt O. (2014) Quality and authenticity of grassland products Grassland Science in Europe, Vol. 19 - EGF at 50: the Future of European Grasslands, 505 - 520  
Professor Maarten Nieuwenhuis
Lynch, C., Cunningham, P., Meredith, D., Nieuwenhuis, M., Buckley, P. and Hochstrasser, T. (2014) Understanding which Irish farmers planted forestry Science & Solutions for a Sustainable Environment, University College Dublin, Available Online  
Corrigan, E. and Nieuwenhuis, M. (2014) Incorporating stakeholder preferences into sustainable forest landscape management - a multi-objective, operations research approach Science & Solutions for a Sustainable Environment, University College Dublin, Available Online  
Meijer, S., Sileshi, G., Catacutan, D. and Nieuwenhuis, M. (2014) Agroforestry and deforestation: Evidence of inter-linkages from Malawi Science & Solutions for a Sustainable Environment, University College Dublin, Available Online  

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Published Reports
Dr John Fry
Ainhoa González, Riki Therivel, John Fry and Walter Foley (2015) Research 157: Developing and Assessing Alternatives in Strategic Environmental Assessment (SEA). EPA, Wexford.  
Walter Foley, Ainhoa González, Riki Therivel and John Fry (2015) Research 157: MOLAND Lite - Land use modelling for SEA alternatives development and assessment. EPA, Wexford.  
Dr Pat Gibbons
Pat Gibbons,Brian Casey, Dominic Crowley, Lisa Doherty, Dualta Roughneen (2015) Recommendations from the Irish Humanitarian Consultative Process. Centre for Humanitarian Action, University College Dublin. Available Online  
Dr James Kinsella
Jim Kinsella Deirdre O'Connor Brian Smyth and Roy Nelson (2014) Institutional Arrangements for Promoting and Enabling Social Farming in Ireland and Northern Ireland: Report of the Social Farming Across Borders Project. SoFAB, Leitrim.  
Jim Kinsella Deirdre O'Connor Brian Smyth and Roy Nelson (2014) Costs and Benefits of Social Farming: Report of the Social Farming Across Borders Project. SoFAB, Leitrim.  
Dr Doris Laepple
Thorne, F., Dillon, E. Donnellan, T., Hanrahan, K., Hennessy, T. Kinsella, A. Läpple, D. and McKeon, M. (2015) A Review of the Financial Status of Irish Farms and Future Investment Requirements. Teagasc/ Bank of Ireland, Athenry.  

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Other Publications
Dr Brídín Carroll
O'Connor, D.; Carroll, B.; Kinsella, J. (2015) TRANSMANGO Light National Report on rhetoric and framing of food and nutrition security in Ireland. Leuven, Belgium: Reports.  
Carroll, B.; Fahy, F. (2015) Greening Ireland? Two Irish case studies. Dublin: Reports.  
Carroll, B. (2015) Sustainable Agrifood Systems, Effect on the Environment. New York: Encyclopedia Entry.  
Dr Owen Doyle
Daly, M; Delaney, L; Doyle, O; Fitzpatrick, N; O'Farrelly, C (2014) Can early intervention policies improve wellbeing? Evidence from a randomized controlled trial. Working Paper.  
McDonnell, T; Doyle, O (2014) Maternal Employment, childcare and childhood overweight during infancy. Working Paper.  
Dr Mary Forrest
Forrest, Mary (2015) Lady Mayo's Garden. Book Reviews.  
Dr James Kinsella
O'Connor, D.; Carroll, B.; Kinsella, J. (2015) TRANSMANGO Light National Report on rhetoric and framing of food and nutrition security in Ireland. Leuven, Belgium: Reports.  
Dr Chenguang (Franci) Li
Chenguang Li, Richard Volpe (2015) Driving Factors of Retail Price Variation: Evidence from Agricultural Products. Research Papers.  
Dr Conor O'Reilly
O'Reilly, C. Tobin, B. and Farrelly, N. (2014) Short rotation forestry. Research Papers. Available Online  
Dr Amalia Scannell
Scannell, A.G.M (2015) webPA: Peer and Self-Assessment for the Digital Native. Implementing WebPA in a flipped class environment. UCD EdTECx talks. Invited Seminars.  

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